##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063093_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1403902 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.254319033664743 32.0 32.0 32.0 32.0 32.0 2 30.871701870928312 32.0 32.0 32.0 32.0 32.0 3 30.917990002151146 32.0 32.0 32.0 32.0 32.0 4 30.994069386609606 32.0 32.0 32.0 32.0 32.0 5 30.89754626747451 32.0 32.0 32.0 32.0 32.0 6 34.55070012009385 36.0 36.0 36.0 32.0 36.0 7 34.49047939243622 36.0 36.0 36.0 32.0 36.0 8 34.476207740996166 36.0 36.0 36.0 32.0 36.0 9 34.627572294932264 36.0 36.0 36.0 32.0 36.0 10 34.34086424835922 36.0 36.0 36.0 32.0 36.0 11 34.58215601943726 36.0 36.0 36.0 32.0 36.0 12 34.413401362773186 36.0 36.0 36.0 32.0 36.0 13 34.48926064639839 36.0 36.0 36.0 32.0 36.0 14 34.40452111329708 36.0 36.0 36.0 32.0 36.0 15 34.343545347182356 36.0 36.0 36.0 32.0 36.0 16 34.360282270414885 36.0 36.0 36.0 32.0 36.0 17 34.28350839303598 36.0 36.0 36.0 32.0 36.0 18 34.305999991452396 36.0 36.0 36.0 32.0 36.0 19 34.30284450054206 36.0 36.0 36.0 32.0 36.0 20 34.29393932055086 36.0 36.0 36.0 32.0 36.0 21 34.28569159385769 36.0 36.0 36.0 32.0 36.0 22 34.25143421691828 36.0 36.0 36.0 32.0 36.0 23 34.192233503478164 36.0 36.0 36.0 32.0 36.0 24 34.17577437741381 36.0 36.0 36.0 32.0 36.0 25 34.15714202273378 36.0 36.0 36.0 32.0 36.0 26 34.104992371262384 36.0 36.0 36.0 32.0 36.0 27 34.11169796752195 36.0 36.0 36.0 32.0 36.0 28 34.1062930318498 36.0 36.0 36.0 32.0 36.0 29 34.0730578060292 36.0 36.0 36.0 32.0 36.0 30 34.04911240243265 36.0 36.0 36.0 32.0 36.0 31 34.07017797538575 36.0 36.0 36.0 32.0 36.0 32 34.02286341924152 36.0 36.0 36.0 32.0 36.0 33 33.988100308995925 36.0 36.0 36.0 32.0 36.0 34 34.001175295711526 36.0 36.0 36.0 32.0 36.0 35 33.96492846366769 36.0 36.0 36.0 32.0 36.0 36 33.92983840752417 36.0 36.0 36.0 32.0 36.0 37 33.9403890015115 36.0 36.0 36.0 32.0 36.0 38 33.36316281335877 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 2.0 9 10.0 10 8.0 11 14.0 12 7.0 13 5.0 14 90.0 15 245.0 16 358.0 17 375.0 18 534.0 19 711.0 20 991.0 21 1460.0 22 2237.0 23 3688.0 24 5756.0 25 8819.0 26 12931.0 27 19125.0 28 27148.0 29 36572.0 30 50213.0 31 67294.0 32 91957.0 33 137052.0 34 302252.0 35 634046.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.496163389197584 16.95247794635235 11.26998628533772 26.28137237911235 2 17.24012592180276 19.05504481883952 36.83084442727603 26.873984832081693 3 19.15417905928868 22.50939464638729 28.445030187536734 29.891396106787298 4 12.960638693436552 14.591563582279221 35.1923189250256 37.25547879925862 5 15.139254932687512 35.773274449747134 33.40223662654035 15.685233991025003 6 35.56500704469141 34.660878955248755 16.074646661357626 13.69946733870221 7 31.025834442742045 29.930885439927746 20.303069803355083 18.74021031397513 8 28.58717044459751 32.68967354489176 18.977576022206726 19.745579988304 9 27.422841671658716 13.95855399854263 18.35466796400596 40.263936365792695 10 16.26865522802259 26.016955671930113 31.034065201410932 26.680323898636367 11 38.40130951923036 20.780924783848125 21.3842552821692 19.433510414752323 12 24.78062318046704 23.422014826233045 27.905571982451278 23.891790010848638 13 29.500769039516307 18.64651894743816 25.041265969413672 26.81144604363186 14 23.75930176396921 19.11557909224187 24.449089093196445 32.67603005059247 15 25.55688946995308 26.593329082223356 21.630502545322415 26.21927890250115 16 26.48924862936409 25.362035949984612 22.829992705139457 25.31872271551184 17 24.756410000655464 25.60095982581783 24.351305368811932 25.291324804714776 18 25.71720223988352 24.262175502182252 25.24242728606099 24.778194971873233 19 25.854843477858235 24.550664448868957 24.836959812508237 24.75753226076457 20 26.06146389555326 23.865022196641156 24.391943103654608 25.681570804150972 21 27.326644935547478 23.794507003726963 23.99324986608008 24.885598194645482 22 26.351298406180945 23.66594054130295 24.494193609052015 25.48856744346409 23 24.78584439462618 23.50023401286109 25.262062347864926 26.451859244647803 24 25.124920744608854 24.499497752352728 24.638987240772536 25.736594262265882 25 25.304335250026185 23.900976964776405 24.73787663869402 26.056811146503396 26 25.28132433855385 24.856781955915704 24.993498994392393 24.868394711138055 27 26.013477895396715 24.047357848095853 24.276453575346565 25.662710681160867 28 25.04852833591795 24.058799603082733 25.35654525262872 25.536126808370597 29 25.12172794916456 24.36254447923234 25.171808270020552 25.343919301582552 30 24.949442928385256 24.535797398456683 25.301330119335347 25.213429553822714 31 25.55213159409388 24.359609981821187 24.239652608004377 25.848605816080557 32 25.476277315066774 24.108636248365155 24.085698573305105 26.329387863262966 33 24.881355207761953 23.928492559322397 24.818595638886713 26.371556594028938 34 25.847030193883715 24.09526631940091 24.70891796701355 25.34878551970182 35 26.28653173059044 23.804479235607623 25.04472182703001 24.864267206771927 36 24.9306818117053 24.652482916236842 24.49703349500453 25.91980177705333 37 26.191398875884225 24.306973364582518 24.406134908140224 25.095492851393036 38 25.119904375681617 24.004382306366807 24.942888261872724 25.932825056078844 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 34.5 2 56.0 3 56.0 4 200.0 5 344.0 6 344.0 7 426.0 8 508.0 9 490.0 10 472.0 11 472.0 12 808.5 13 1145.0 14 1646.0 15 2147.0 16 2147.0 17 3109.5 18 4072.0 19 4072.0 20 5209.5 21 6347.0 22 7071.0 23 7795.0 24 7795.0 25 9379.0 26 10963.0 27 10963.0 28 14089.0 29 17215.0 30 21052.5 31 24890.0 32 24890.0 33 32836.5 34 40783.0 35 40783.0 36 46772.0 37 52761.0 38 61613.5 39 70466.0 40 70466.0 41 76443.5 42 82421.0 43 94752.0 44 107083.0 45 107083.0 46 111280.5 47 115478.0 48 115478.0 49 124971.5 50 134465.0 51 137982.0 52 141499.0 53 141499.0 54 134518.0 55 127537.0 56 127537.0 57 124176.0 58 120815.0 59 108425.0 60 96035.0 61 96035.0 62 90905.5 63 85776.0 64 70809.0 65 55842.0 66 55842.0 67 47335.0 68 38828.0 69 38828.0 70 30822.5 71 22817.0 72 17714.0 73 12611.0 74 12611.0 75 9798.5 76 6986.0 77 6986.0 78 6480.5 79 5975.0 80 4724.0 81 3473.0 82 3473.0 83 3343.0 84 3213.0 85 3213.0 86 2125.0 87 1037.0 88 884.0 89 731.0 90 731.0 91 524.0 92 317.0 93 285.5 94 254.0 95 254.0 96 220.0 97 186.0 98 186.0 99 366.0 100 546.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12486626559403718 2 0.0576251048862385 3 0.012607717632712255 4 0.0025642815524160516 5 1.4246008624533622E-4 6 5.698403449813449E-4 7 7.123004312266811E-5 8 2.1369012936800431E-4 9 2.1369012936800431E-4 10 4.2738025873600863E-4 11 0.001994441207434707 12 0.002777971681784056 13 0.014459698753901625 14 0.009687285864682862 15 0.02471682496356583 16 0.01239402750334425 17 0.022366233540517786 18 0.00562717340669078 19 0.007621614614125488 20 0.006125783708549458 21 0.005555943363568112 22 0.007407924484757482 23 0.009473595735314859 24 0.01510076914200564 25 0.01916088159999772 26 0.01944580177248839 27 0.008690065260965508 28 0.005912093579181453 29 0.011183116770258893 30 0.003062891854274729 31 0.004986103018586768 32 0.006980544226021474 33 0.00940236569219219 34 0.01239402750334425 35 0.016026759702600327 36 0.016382909918213666 37 0.00940236569219219 38 0.005342253234200108 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1403902.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.69848303251859 #Duplication Level Percentage of deduplicated Percentage of total 1 83.25453997499883 48.03660662127611 2 9.94931723704051 11.481210235730533 3 2.8426062672617176 4.9204220843919355 4 1.2344657351853827 2.8490720110327756 5 0.6769417106338381 1.9529254902505306 6 0.4403116637734159 1.524318903675028 7 0.27952244034640894 1.1289614547074827 8 0.2007683962976498 0.9267225525796733 9 0.16130410100873452 0.8376301741615318 >10 0.8055130312255712 8.311531921945885 >50 0.07010189923844656 2.842378024396985 >100 0.07220178819266064 8.924385526260735 >500 0.009056201001670927 3.5531260275478522 >1k 0.0033495537951385625 2.7107089720428927 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2365 0.16845905198511008 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2091 0.148942020169499 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1893 0.13483847163121074 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1714 0.12208829391225315 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1609 0.11460913938437299 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1569 0.11175993765946625 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1533 0.10919565610705022 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1511 0.1076285951583515 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1485 0.10577661403716214 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1476 0.10513554364905812 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1423 0.10136035136355671 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1422 0.10128912132043404 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.123004312266811E-5 2 0.0 0.0 0.0 0.0 7.123004312266811E-5 3 0.0 0.0 0.0 0.0 7.123004312266811E-5 4 0.0 0.0 0.0 0.0 7.123004312266811E-5 5 0.0 0.0 0.0 0.0 7.123004312266811E-5 6 0.0 0.0 0.0 0.0 7.123004312266811E-5 7 0.0 0.0 0.0 0.0 7.123004312266811E-5 8 0.0 0.0 0.0 0.0 7.123004312266811E-5 9 0.0 0.0 0.0 0.0 7.123004312266811E-5 10 0.0 0.0 0.0 0.0 7.123004312266811E-5 11 0.0 0.0 0.0 0.0 7.123004312266811E-5 12 0.0 0.0 0.0 0.0 7.123004312266811E-5 13 0.0 0.0 0.0 0.0 7.123004312266811E-5 14 0.0 0.0 0.0 7.123004312266811E-5 7.123004312266811E-5 15 0.0 0.0 0.0 7.123004312266811E-5 2.1369012936800431E-4 16 0.0 0.0 0.0 7.123004312266811E-5 3.561502156133405E-4 17 0.0 0.0 0.0 7.123004312266811E-5 3.561502156133405E-4 18 0.0 0.0 0.0 7.123004312266811E-5 4.2738025873600863E-4 19 0.0 0.0 0.0 7.123004312266811E-5 4.2738025873600863E-4 20 0.0 0.0 0.0 7.123004312266811E-5 4.2738025873600863E-4 21 0.0 0.0 0.0 7.123004312266811E-5 4.2738025873600863E-4 22 0.0 0.0 0.0 7.123004312266811E-5 4.2738025873600863E-4 23 0.0 0.0 0.0 7.123004312266811E-5 4.2738025873600863E-4 24 0.0 0.0 0.0 2.8492017249067244E-4 4.2738025873600863E-4 25 0.0 0.0 0.0 3.561502156133405E-4 4.2738025873600863E-4 26 0.0 0.0 0.0 4.986103018586768E-4 4.2738025873600863E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1640 0.0 20.211573 1 AAGACGG 480 0.0 18.661245 5 ACCGTCG 335 0.0 18.146568 8 CAAGACG 485 0.0 18.139704 4 GCGCAAG 490 0.0 17.973812 1 CTAGCGG 385 0.0 17.455692 29 GGTATCA 655 0.0 17.357637 1 TACCGTC 360 0.0 16.886387 7 ATACCGT 395 0.0 16.60277 6 TCTAGCG 430 0.0 16.372585 28 CGCAAGA 525 0.0 16.15747 2 GTCTATA 70 3.6742754E-4 16.013033 1 TAGCGGC 420 0.0 15.999911 30 GACGGAC 560 0.0 15.71196 7 CCGTCGT 395 0.0 15.392867 9 CGTCGTA 410 0.0 15.21997 10 TAGAACT 200 0.0 15.196125 4 ACGGACC 590 0.0 15.184192 8 CTATTCC 435 0.0 15.076616 4 AGCGAAA 595 0.0 15.059278 17 >>END_MODULE