##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063092_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 847044 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20445455017685 32.0 32.0 32.0 32.0 32.0 2 30.78441025495724 32.0 32.0 32.0 32.0 32.0 3 30.827079821119092 32.0 32.0 32.0 32.0 32.0 4 30.90018582269634 32.0 32.0 32.0 32.0 32.0 5 30.786647446885876 32.0 32.0 32.0 32.0 32.0 6 34.44654350895585 36.0 36.0 36.0 32.0 36.0 7 34.38084562313174 36.0 36.0 36.0 32.0 36.0 8 34.34370941769259 36.0 36.0 36.0 32.0 36.0 9 34.51147283966358 36.0 36.0 36.0 32.0 36.0 10 34.19492257781178 36.0 36.0 36.0 32.0 36.0 11 34.504091877163404 36.0 36.0 36.0 32.0 36.0 12 34.30655314245777 36.0 36.0 36.0 32.0 36.0 13 34.390790797172286 36.0 36.0 36.0 32.0 36.0 14 34.274750780360876 36.0 36.0 36.0 32.0 36.0 15 34.21432652849202 36.0 36.0 36.0 32.0 36.0 16 34.226591534796306 36.0 36.0 36.0 32.0 36.0 17 34.146067972856194 36.0 36.0 36.0 32.0 36.0 18 34.17760470530457 36.0 36.0 36.0 32.0 36.0 19 34.15717365331671 36.0 36.0 36.0 32.0 36.0 20 34.148641629006285 36.0 36.0 36.0 32.0 36.0 21 34.11368004495634 36.0 36.0 36.0 32.0 36.0 22 34.09292905681405 36.0 36.0 36.0 32.0 36.0 23 34.00128918922748 36.0 36.0 36.0 32.0 36.0 24 33.98121703240918 36.0 36.0 36.0 32.0 36.0 25 33.94749623396187 36.0 36.0 36.0 32.0 36.0 26 33.87193935616096 36.0 36.0 36.0 32.0 36.0 27 33.870051614792146 36.0 36.0 36.0 32.0 36.0 28 33.84938326698495 36.0 36.0 36.0 32.0 36.0 29 33.807324058726586 36.0 36.0 36.0 32.0 36.0 30 33.75518272958666 36.0 36.0 36.0 32.0 36.0 31 33.78619174446664 36.0 36.0 36.0 32.0 36.0 32 33.72969763081965 36.0 36.0 36.0 32.0 36.0 33 33.68474010795189 36.0 36.0 36.0 27.0 36.0 34 33.69413749462838 36.0 36.0 36.0 27.0 36.0 35 33.621123577995945 36.0 36.0 36.0 27.0 36.0 36 33.58181865404867 36.0 36.0 36.0 27.0 36.0 37 33.54834341545421 36.0 36.0 36.0 27.0 36.0 38 32.91870316063864 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 1.0 10 12.0 11 7.0 12 1.0 13 7.0 14 60.0 15 172.0 16 251.0 17 274.0 18 384.0 19 515.0 20 753.0 21 1106.0 22 1674.0 23 2575.0 24 4017.0 25 6176.0 26 8988.0 27 13362.0 28 18866.0 29 25318.0 30 34154.0 31 45681.0 32 60335.0 33 88068.0 34 184766.0 35 349517.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.057474579597006 16.129573722123848 10.888868925049707 25.92408277322944 2 16.964873175116736 18.906257198240883 36.79427708103728 27.3345925456051 3 20.202259927030568 22.98442610369216 27.04284887771126 29.770465091566006 4 12.827460328142138 14.360616332019301 34.796360377846334 38.01556296199223 5 14.927713147636126 36.01486112849186 33.21606248568548 15.841363238186537 6 35.999329427959545 33.81276873056463 16.265622085431822 13.922279756044004 7 31.280193236714975 29.391507406935176 20.015134987084497 19.31316436926535 8 29.27473404475108 32.29052666872087 18.81561813418713 19.619121152340913 9 27.390108884672916 14.378844993701618 17.75435249450146 40.47669362712401 10 16.337618456765274 26.100214984197894 30.921952826257115 26.640213732779717 11 38.81601938079677 20.86835792138121 20.461521751449784 19.854100946372238 12 24.93689656230889 23.28369274942091 28.00954402601113 23.76986666225907 13 30.50027925144083 18.773489887319386 24.592192531175204 26.134038330064573 14 24.09768146434825 18.913593015938236 24.132512040162606 32.85621347955091 15 25.991254453367908 26.027743434050006 22.361486530370286 25.6195155822118 16 26.91412162816344 25.095461082340943 23.110555386319252 24.879861903176366 17 24.704437569373923 25.238528210093758 24.874241314975322 25.182792905557 18 26.157333616689687 23.760256909762806 25.912466499014158 24.16994297453335 19 25.573992693887092 25.385908694841092 24.57300327523549 24.467095336036326 20 25.785458843031016 23.495110326108133 25.53905658751176 25.180374243349085 21 26.959027803194612 24.1184950453902 23.64139321762148 25.281083933793706 22 25.726939134048664 24.122171112286534 24.729390207042467 25.421499546622332 23 24.60036436238354 23.727358703313854 24.959767828194753 26.712509106107852 24 24.753779939898806 25.125958637627598 24.7230799204161 25.397181502057492 25 25.677927175300486 23.78805572906765 24.388729021600387 26.145288074031477 26 24.626093733394736 24.829430727266285 25.213078748804417 25.331396790534555 27 26.048301877881613 24.328396096650984 24.58980005076951 25.03350197469789 28 25.111897433354468 23.6465753068841 25.310012857431275 25.93151440233016 29 24.41988558879266 24.807632136679477 25.663886084692635 25.108596189835232 30 25.243413060186516 24.458895157948422 25.606333757173704 24.691358024691358 31 24.96484614358358 24.713721869535803 24.45693047505818 25.86450151182244 32 24.95516417762424 24.627647202587077 24.42563511019754 25.99155350959115 33 24.38574285855969 24.21749366556547 24.9959265984854 26.400836877389434 34 25.118988722785502 24.636657854436443 25.39693409955262 24.84741932322544 35 26.14125179035517 24.1227112087746 25.308330745460793 24.42770625540944 36 24.792273041250198 25.25678795142312 24.666639115367133 25.284299891959545 37 26.04026211700809 24.78540645846862 24.767577779089674 24.406753645433614 38 24.84630814876734 24.633199801177586 24.7564602526367 25.76403179741838 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 34.0 1 57.0 2 80.0 3 80.0 4 222.5 5 365.0 6 365.0 7 485.0 8 605.0 9 612.0 10 619.0 11 619.0 12 791.5 13 964.0 14 1249.0 15 1534.0 16 1534.0 17 2268.5 18 3003.0 19 3003.0 20 3637.0 21 4271.0 22 4422.0 23 4573.0 24 4573.0 25 5489.0 26 6405.0 27 6405.0 28 8339.0 29 10273.0 30 12638.5 31 15004.0 32 15004.0 33 19142.5 34 23281.0 35 23281.0 36 27103.5 37 30926.0 38 35957.0 39 40988.0 40 40988.0 41 45075.0 42 49162.0 43 56553.5 44 63945.0 45 63945.0 46 72111.0 47 80277.0 48 80277.0 49 81334.5 50 82392.0 51 81071.5 52 79751.0 53 79751.0 54 77093.5 55 74436.0 56 74436.0 57 72584.5 58 70733.0 59 64690.5 60 58648.0 61 58648.0 62 54895.0 63 51142.0 64 43148.5 65 35155.0 66 35155.0 67 29315.5 68 23476.0 69 23476.0 70 18671.5 71 13867.0 72 10882.0 73 7897.0 74 7897.0 75 6048.0 76 4199.0 77 4199.0 78 3771.0 79 3343.0 80 2630.5 81 1918.0 82 1918.0 83 1829.5 84 1741.0 85 1741.0 86 1202.5 87 664.0 88 567.0 89 470.0 90 470.0 91 336.0 92 202.0 93 175.5 94 149.0 95 149.0 96 137.5 97 126.0 98 126.0 99 276.0 100 426.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12632165507340823 2 0.057021831215379605 3 0.013458568858288352 4 0.0038959015116097864 5 2.3611524312786583E-4 6 7.083457293835976E-4 7 0.0 8 3.541728646917988E-4 9 1.1805762156393292E-4 10 5.902881078196647E-4 11 0.0023611524312786587 12 0.0025972676744065244 13 0.016173894154258812 14 0.010271013076062164 15 0.02514627339311771 16 0.012041877399521159 17 0.02172260236776366 18 0.006375111564452377 19 0.0096807249682425 20 0.006493169186016311 21 0.006493169186016311 22 0.008027918266347439 23 0.010034897832934299 24 0.016410009397386675 25 0.0190072770717932 26 0.02054202615212433 27 0.009326552103550701 28 0.007437630158527774 29 0.01168770453482936 30 0.0031875557822261887 31 0.006257053942888445 32 0.00767374540165564 33 0.010152955454498232 34 0.013576626479852288 35 0.017118355126770273 36 0.016410009397386675 37 0.011097416427009696 38 0.006729284429144176 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 847044.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.935697221475756 #Duplication Level Percentage of deduplicated Percentage of total 1 77.30680953723595 42.46903481895888 2 13.621811555930243 14.966474304891669 3 4.248789214079038 7.0023059346755385 4 1.768465754925368 3.8860759703651424 5 0.8937129808239093 2.4548372858722423 6 0.5358801253272014 1.7663368987188972 7 0.3184697082663526 1.2246748827272442 8 0.210052839432952 0.9231519350079931 9 0.16537201880011146 0.8176344438336407 >10 0.756137122529507 7.589315557332337 >50 0.08078771171906808 3.0743657682755927 >100 0.08509428786435652 9.455585492190153 >500 0.006678285876113511 2.5200850765582974 >1k 0.0019388571898394063 1.850121630592461 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 3261 0.3849859039199853 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2641 0.31179017855034685 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2210 0.26090734365629176 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 1520 0.17944758477717807 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1366 0.1612667110563324 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1302 0.15371102327624067 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1275 0.1505234674940145 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1045 0.12337021453430991 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1013 0.11959237064426405 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 987 0.1165228724836018 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 939 0.11085610664853301 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 902 0.10648797465066749 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 875 0.10330041886844131 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 874 0.10318236124687737 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 860 0.10152955454498232 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 853 0.10070315119403478 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.3611524312786586E-4 0.0 10 0.0 0.0 0.0 2.3611524312786586E-4 0.0 11 0.0 0.0 0.0 2.3611524312786586E-4 0.0 12 0.0 0.0 0.0 2.3611524312786586E-4 2.3611524312786586E-4 13 0.0 0.0 0.0 2.3611524312786586E-4 2.3611524312786586E-4 14 0.0 0.0 0.0 2.3611524312786586E-4 2.3611524312786586E-4 15 0.0 0.0 0.0 2.3611524312786586E-4 2.3611524312786586E-4 16 0.0 0.0 0.0 3.541728646917988E-4 2.3611524312786586E-4 17 0.0 0.0 0.0 4.722304862557317E-4 2.3611524312786586E-4 18 0.0 0.0 0.0 4.722304862557317E-4 3.541728646917988E-4 19 0.0 0.0 0.0 7.083457293835976E-4 3.541728646917988E-4 20 0.0 0.0 0.0 9.444609725114634E-4 5.902881078196647E-4 21 0.0 0.0 0.0 0.0011805762156393293 7.083457293835976E-4 22 0.0 0.0 0.0 0.001534749080331128 7.083457293835976E-4 23 0.0 0.0 0.0 0.0025972676744065244 7.083457293835976E-4 24 0.0 0.0 0.0 0.0040139591331737196 7.083457293835976E-4 25 0.0 0.0 0.0 0.004604247240993384 7.083457293835976E-4 26 0.0 0.0 0.0 0.006729284429144177 7.083457293835976E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGTA 40 0.0044844844 19.998486 7 TATACTG 100 3.266905E-9 19.19628 5 ATACCGT 185 0.0 19.023342 6 TCTAGAT 220 0.0 18.918833 2 ACCGAGT 60 1.1383927E-4 18.665255 8 TAGCGGC 225 0.0 18.488583 30 TCTAGCG 225 0.0 18.486399 28 CGTCGTA 185 0.0 18.161861 10 CTAGCGG 230 0.0 18.086657 29 GTCGTAG 205 0.0 17.950922 11 GCATTAT 55 0.0013525599 17.47696 1 TGTTAGG 55 0.001359543 17.463537 2 TAAGGTA 55 0.0013660159 17.451164 5 GCGAAAG 285 0.0 17.40322 18 GTGTTAG 75 3.1966647E-5 17.088583 1 CTAGATA 225 0.0 17.062353 3 ATTTGCC 265 0.0 16.903383 26 CGAAAGC 295 0.0 16.81328 19 CCGTCGT 200 0.0 16.79972 9 TACCGTC 200 0.0 16.798729 7 >>END_MODULE