##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063087_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1458243 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.221172328617385 32.0 32.0 32.0 32.0 32.0 2 30.885504679261274 32.0 32.0 32.0 32.0 32.0 3 30.929581695231864 32.0 32.0 32.0 32.0 32.0 4 30.98547567175018 32.0 32.0 32.0 32.0 32.0 5 30.931777488388423 32.0 32.0 32.0 32.0 32.0 6 34.56949493328615 36.0 36.0 36.0 32.0 36.0 7 34.49405003144195 36.0 36.0 36.0 32.0 36.0 8 34.48578323365859 36.0 36.0 36.0 32.0 36.0 9 34.582841131416366 36.0 36.0 36.0 32.0 36.0 10 34.35620332139431 36.0 36.0 36.0 32.0 36.0 11 34.5868610375637 36.0 36.0 36.0 32.0 36.0 12 34.415468478161735 36.0 36.0 36.0 32.0 36.0 13 34.49448960152732 36.0 36.0 36.0 32.0 36.0 14 34.402179197842884 36.0 36.0 36.0 32.0 36.0 15 34.351794591162104 36.0 36.0 36.0 32.0 36.0 16 34.36905440314131 36.0 36.0 36.0 32.0 36.0 17 34.305403831871644 36.0 36.0 36.0 32.0 36.0 18 34.32047127947811 36.0 36.0 36.0 32.0 36.0 19 34.307624312271685 36.0 36.0 36.0 32.0 36.0 20 34.28208261586032 36.0 36.0 36.0 32.0 36.0 21 34.268043803399024 36.0 36.0 36.0 32.0 36.0 22 34.25516186259766 36.0 36.0 36.0 32.0 36.0 23 34.19963682321808 36.0 36.0 36.0 32.0 36.0 24 34.19220870595642 36.0 36.0 36.0 32.0 36.0 25 34.175340461089135 36.0 36.0 36.0 32.0 36.0 26 34.12063490104187 36.0 36.0 36.0 32.0 36.0 27 34.12868637120151 36.0 36.0 36.0 32.0 36.0 28 34.11715948576472 36.0 36.0 36.0 32.0 36.0 29 34.089329419033724 36.0 36.0 36.0 32.0 36.0 30 34.059752729826236 36.0 36.0 36.0 32.0 36.0 31 34.07792871284141 36.0 36.0 36.0 32.0 36.0 32 34.037547240069046 36.0 36.0 36.0 32.0 36.0 33 33.99278926763235 36.0 36.0 36.0 32.0 36.0 34 33.9938727633186 36.0 36.0 36.0 32.0 36.0 35 33.95156568555446 36.0 36.0 36.0 32.0 36.0 36 33.918108298822624 36.0 36.0 36.0 32.0 36.0 37 33.91602291250498 36.0 36.0 36.0 32.0 36.0 38 33.318606021081536 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 7.0 10 9.0 11 12.0 12 6.0 13 4.0 14 209.0 15 384.0 16 497.0 17 615.0 18 800.0 19 975.0 20 1375.0 21 1900.0 22 2923.0 23 4311.0 24 6426.0 25 9650.0 26 13875.0 27 20099.0 28 27866.0 29 37374.0 30 50268.0 31 66911.0 32 91012.0 33 135395.0 34 305024.0 35 680313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.61051537359814 17.211962171240092 11.295622668144224 25.88189978701754 2 16.734550764176408 20.080678694594294 37.19090206712566 25.99386847410364 3 18.86655930910747 24.5002935415375 28.454736992269158 28.178410157085874 4 12.748853712763667 15.523396878038879 35.99005888137727 35.737690527820185 5 14.72047487349485 36.33055167150012 33.45880413457035 15.490169320434688 6 33.60690531524668 35.53032116134598 17.168927727210697 13.693845796196646 7 29.620577640352124 30.70825644285623 21.40706315751216 18.26410275927949 8 27.905664233136157 32.42694265270827 19.959224763035937 19.70816835111964 9 27.830927809600748 14.205676565121953 18.648289274543785 39.31510635073352 10 16.090709410460153 26.346367090716953 31.397116659203327 26.16580683961957 11 37.18095454928862 21.351966133984174 22.39790099827392 19.06917831845329 12 25.18011808998704 23.821466043985435 28.375542617318494 22.622873248709034 13 29.412769272869806 19.43037501534587 25.25940521807596 25.897450493708362 14 24.026294222335 19.70262976514198 25.066952880945603 31.204123131577415 15 25.098051320040334 26.589089861514086 22.789678375208346 25.523180443237237 16 25.777109326134905 25.631645652961122 23.586581404790905 25.004663616113064 17 24.124754880610823 25.546121540807277 25.170254663527125 25.15886891505477 18 25.14622770580405 24.539440161682 26.0534601223039 24.26087201021005 19 25.643112947847328 24.93735178055361 25.50931253609045 23.91022273550861 20 25.888107993932064 23.927618169798016 24.97764299567399 25.206630840595928 21 27.22469032848292 24.0672821463792 24.359362977125937 24.348664548011946 22 26.00882498978145 24.073746409790058 24.901997898681326 25.015430701747164 23 24.365669876065844 24.017411544921416 25.521821696946674 26.095096882066066 24 24.88117756632452 24.95545444694244 25.16203059137565 25.001337395357385 25 24.95349845269188 24.17970721857648 25.314948532800734 25.551845795930912 26 24.73982785736675 25.129545939339238 25.69738754452231 24.433238658771707 27 25.5136443752529 24.724952164102845 24.650472186597717 25.11093127404654 28 24.56308069599853 24.45019901739448 25.727215868722585 25.25950441788441 29 24.641312070843266 24.82579974377474 25.573009110536233 24.959879074845755 30 24.57339732973439 25.013526886100536 25.7289945803305 24.68408120383457 31 25.012755766841043 24.885540995388723 24.650725158486974 25.450978079283264 32 24.805301504918553 24.87429294065365 24.550938448117893 25.769467106309907 33 24.3271324474925 24.436930990141448 25.31525075010716 25.920685812258892 34 25.192395664659205 24.54043480974416 25.45603310693708 24.811136418659547 35 25.9652282577161 24.310247506383647 25.36708954522665 24.357434690673603 36 24.72317156058882 25.176933581064354 24.831673905871813 25.268220952475012 37 25.582315628341245 24.986197801112542 24.792658396091905 24.638828174454307 38 24.583688232171735 24.84998237507218 25.359390794712795 25.206938598043287 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 506.0 1 408.0 2 310.0 3 310.0 4 720.0 5 1130.0 6 1130.0 7 1267.0 8 1404.0 9 1382.0 10 1360.0 11 1360.0 12 1767.0 13 2174.0 14 2841.0 15 3508.0 16 3508.0 17 5087.0 18 6666.0 19 6666.0 20 8137.0 21 9608.0 22 10139.5 23 10671.0 24 10671.0 25 12061.5 26 13452.0 27 13452.0 28 17425.5 29 21399.0 30 26118.5 31 30838.0 32 30838.0 33 39627.5 34 48417.0 35 48417.0 36 54636.5 37 60856.0 38 69400.5 39 77945.0 40 77945.0 41 84335.0 42 90725.0 43 102958.0 44 115191.0 45 115191.0 46 119664.5 47 124138.0 48 124138.0 49 130231.5 50 136325.0 51 136951.0 52 137577.0 53 137577.0 54 131674.0 55 125771.0 56 125771.0 57 121772.0 58 117773.0 59 105384.0 60 92995.0 61 92995.0 62 87882.5 63 82770.0 64 67880.5 65 52991.0 66 52991.0 67 44363.0 68 35735.0 69 35735.0 70 28572.0 71 21409.0 72 16814.5 73 12220.0 74 12220.0 75 9347.0 76 6474.0 77 6474.0 78 6096.5 79 5719.0 80 4514.0 81 3309.0 82 3309.0 83 3358.0 84 3407.0 85 3407.0 86 2289.0 87 1171.0 88 987.5 89 804.0 90 804.0 91 587.5 92 371.0 93 300.5 94 230.0 95 230.0 96 219.5 97 209.0 98 209.0 99 447.0 100 685.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12240758227538208 2 0.05876935462745235 3 0.0128236514764686 4 0.003908813551650857 5 1.3715135268950373E-4 6 2.7430270537900746E-4 7 0.0 8 3.4287838172375934E-4 9 1.3715135268950373E-4 10 2.7430270537900746E-4 11 0.0017829675849635484 12 0.0022629973193768116 13 0.013440832563571366 14 0.008777686572128239 15 0.02283570022280237 16 0.010080624422678526 17 0.019201189376530526 18 0.004937448696822134 19 0.006926143310819938 20 0.005966083841993413 21 0.005828932489303909 22 0.007611900074267458 23 0.008914837924817743 24 0.012686500123779096 25 0.015566678530258674 26 0.018241129907703997 27 0.009120564953851999 28 0.005417478431235397 29 0.010354927128057531 30 0.002468724348411067 31 0.005417478431235397 32 0.0062403865473724205 33 0.00809192980868072 34 0.012343621742055336 35 0.015086648795845412 36 0.014400892032397892 37 0.009737746040954766 38 0.005554629783924901 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1458243.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.61183887789033 #Duplication Level Percentage of deduplicated Percentage of total 1 80.56134987304776 45.6072615879833 2 12.096473802262652 13.696072517686295 3 3.4041936707973406 5.781529908009393 4 1.3700878682813828 3.1025277459079152 5 0.7114683939216457 2.0138767041701806 6 0.434613696929551 1.4762568350819998 7 0.2528069894736571 1.0018307988701034 8 0.19267541526760187 0.8726167651888069 9 0.14135996409497623 0.720238276001624 >10 0.680642636359756 6.987623039549945 >50 0.06641868358013672 2.665919084490657 >100 0.0742910782331265 9.159708599325457 >500 0.009727091250278763 3.6856244218375522 >1k 0.0038908365001115055 3.22891371589679 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4190 0.2873320838845103 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2619 0.17959969634690515 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1783 0.12227043092269257 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1747 0.1198017065742815 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1741 0.119390252516213 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1715 0.11760728493124945 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1618 0.11095544432580852 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1590 0.10903532538815547 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1576 0.10807526591932895 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1561 0.10704663077415767 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1551 0.10636087401071015 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1468 0.10066909287409574 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 6.857567634475186E-5 0.0 0.0 0.0 14 0.0 6.857567634475186E-5 0.0 0.0 0.0 15 0.0 6.857567634475186E-5 0.0 0.0 6.857567634475186E-5 16 0.0 6.857567634475186E-5 0.0 0.0 6.857567634475186E-5 17 0.0 6.857567634475186E-5 0.0 0.0 6.857567634475186E-5 18 0.0 6.857567634475186E-5 0.0 6.857567634475186E-5 6.857567634475186E-5 19 0.0 6.857567634475186E-5 0.0 6.857567634475186E-5 6.857567634475186E-5 20 0.0 6.857567634475186E-5 0.0 1.3715135268950373E-4 2.057270290342556E-4 21 0.0 6.857567634475186E-5 0.0 2.057270290342556E-4 2.7430270537900746E-4 22 0.0 6.857567634475186E-5 0.0 3.4287838172375934E-4 2.7430270537900746E-4 23 0.0 6.857567634475186E-5 0.0 8.229081161370224E-4 2.7430270537900746E-4 24 0.0 6.857567634475186E-5 0.0 0.002125845966687308 2.7430270537900746E-4 25 0.0 6.857567634475186E-5 0.0 0.002537300024755819 2.7430270537900746E-4 26 0.0 6.857567634475186E-5 0.0 0.0027430270537900747 2.7430270537900746E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATAAT 135 4.3655746E-10 16.610432 1 TCTAGCG 390 0.0 16.409306 28 GTATTAG 255 0.0 16.331263 1 CATCGTT 315 0.0 16.253027 28 ATCGTTT 325 0.0 15.752934 29 AACGGAC 65 0.0041619944 14.769389 15 TAGCCGA 65 0.004164842 14.76787 19 CTAGCGG 430 0.0 14.510787 29 TACTATA 100 2.3172839E-5 14.406083 2 TAGCGGC 435 0.0 14.343997 30 GCATCGT 360 0.0 14.221399 27 CGTCGTA 360 0.0 13.7779255 10 CGCTTCG 375 0.0 13.652543 32 GTAACAC 130 1.3389254E-6 13.53675 3 GTCTTAC 95 2.4056747E-4 13.48817 1 GTATCAA 3780 0.0 13.390041 1 TACCGTC 335 0.0 13.371443 7 CGGCATC 400 0.0 13.199689 25 TTTCGTT 500 0.0 13.119242 28 ACCGTCG 355 0.0 13.068769 8 >>END_MODULE