##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063080_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1083666 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.118848427467505 32.0 32.0 32.0 32.0 32.0 2 31.122881958094098 32.0 32.0 32.0 32.0 32.0 3 31.26215180692206 32.0 32.0 32.0 32.0 32.0 4 31.39157821690447 32.0 32.0 32.0 32.0 32.0 5 31.268942644689414 32.0 32.0 32.0 32.0 32.0 6 34.7988411558543 36.0 36.0 36.0 32.0 36.0 7 34.831438838166 36.0 36.0 36.0 32.0 36.0 8 34.757239776831604 36.0 36.0 36.0 32.0 36.0 9 34.89621894568991 36.0 36.0 36.0 32.0 36.0 10 34.704873088202454 36.0 36.0 36.0 32.0 36.0 11 34.91386183565785 36.0 36.0 36.0 36.0 36.0 12 34.7930746189324 36.0 36.0 36.0 32.0 36.0 13 34.87339826108783 36.0 36.0 36.0 32.0 36.0 14 34.80821858395483 36.0 36.0 36.0 32.0 36.0 15 34.7683308325628 36.0 36.0 36.0 32.0 36.0 16 34.7779887899039 36.0 36.0 36.0 32.0 36.0 17 34.74410104220304 36.0 36.0 36.0 32.0 36.0 18 34.75491064590012 36.0 36.0 36.0 32.0 36.0 19 34.75106536515864 36.0 36.0 36.0 32.0 36.0 20 34.73915210037041 36.0 36.0 36.0 32.0 36.0 21 34.7295854995912 36.0 36.0 36.0 32.0 36.0 22 34.71654088990519 36.0 36.0 36.0 32.0 36.0 23 34.65382322597553 36.0 36.0 36.0 32.0 36.0 24 34.62839288120141 36.0 36.0 36.0 32.0 36.0 25 34.610647561148916 36.0 36.0 36.0 32.0 36.0 26 34.54858784902359 36.0 36.0 36.0 32.0 36.0 27 34.52970287893133 36.0 36.0 36.0 32.0 36.0 28 34.50513719171774 36.0 36.0 36.0 32.0 36.0 29 34.46208149005321 36.0 36.0 36.0 32.0 36.0 30 34.44343829187222 36.0 36.0 36.0 32.0 36.0 31 34.43536200268348 36.0 36.0 36.0 32.0 36.0 32 34.415719419083004 36.0 36.0 36.0 32.0 36.0 33 34.38088765357592 36.0 36.0 36.0 32.0 36.0 34 34.37072400536697 36.0 36.0 36.0 32.0 36.0 35 34.337158312616616 36.0 36.0 36.0 32.0 36.0 36 34.31434685595008 36.0 36.0 36.0 32.0 36.0 37 34.312537257789764 36.0 36.0 36.0 32.0 36.0 38 33.83869568667837 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 7.0 21 15.0 22 69.0 23 228.0 24 661.0 25 1633.0 26 3632.0 27 7332.0 28 13165.0 29 21129.0 30 32974.0 31 48513.0 32 71161.0 33 114877.0 34 268731.0 35 499538.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.63405423264553 18.703451789204784 12.06668057152666 26.59581340662302 2 16.00705383393038 20.52542019404503 36.2923631451019 27.175162826922687 3 18.198042570312257 24.004813291180124 28.647203105015752 29.14994103349187 4 12.057877665145595 16.02635500823594 36.01472779872009 35.901039527898384 5 14.202069641383968 36.89051792711038 33.27012197485203 15.637290456653618 6 34.509713813242676 36.08105102785645 16.193133843270463 13.216101315630413 7 30.427781381815898 30.52882774225519 20.460088533222105 18.583302342706805 8 28.38093357314171 32.87835569463375 19.01022753803605 19.73048319418849 9 27.25742492937977 13.95645862498881 18.438962987708713 40.34715345792271 10 15.575535153521258 26.735205936173767 31.45596270420362 26.233296206101354 11 37.92900423951702 21.10825441531763 21.741413455344798 19.221327889820543 12 24.358031447161885 24.033667417517872 28.465688929820175 23.142612205500072 13 29.276564094708498 19.18190358248236 25.318411091281227 26.223121231527912 14 23.36910081150465 19.620897951951985 25.06741006915415 31.94259116738921 15 25.135696792185048 27.23182235116724 22.126282452342327 25.506198404305387 16 25.919356996857886 25.97398642569429 23.33350251230777 24.77315406514006 17 24.181435977505984 25.987712081028658 24.904260168723575 24.926591772741784 18 25.18691183445822 24.85138409805235 25.84643238783906 24.11527167965037 19 25.446401381975626 25.124438710820492 25.540710883242625 23.888449023961257 20 25.744648258780845 24.107335655081915 24.985373722161626 25.162642363975618 21 26.858115746102346 24.244023752728012 24.611111367442888 24.28674913372675 22 25.660144048206778 24.136979601629655 25.400654261233868 24.802222088929696 23 24.306334804884173 24.044445510785632 25.80080172451978 25.848417959810423 24 24.52674532558925 25.024131051449434 25.385312448669605 25.06381117429171 25 24.738803284406817 24.574730590421773 25.453876009766844 25.232590115404562 26 24.591824964357066 25.51074363387209 25.53888886325571 24.35854253851513 27 25.291648902890746 24.7669484878182 24.915795088154468 25.025607521136585 28 24.448123314748273 24.788910974414627 25.891280154586376 24.87168555625073 29 24.346339185690056 25.080606016983094 25.779991251917107 24.793063545409748 30 24.330928533330383 25.299769486170092 25.89109559587548 24.478206384624045 31 24.995247613194472 25.073408227258216 24.821485586887473 25.109858572659842 32 24.72966762821755 24.945693599319345 24.884789224724223 25.43984954773888 33 24.404936576399 24.56218059808096 25.429791097995142 25.6030917275249 34 25.01222701459675 24.80026133513463 25.559074474976605 24.628437175292017 35 25.651630668490107 24.551937589626323 25.452491819435142 24.343939922448428 36 24.43769574758274 25.342771665808467 25.173992724695616 25.045539861913173 37 25.55446050720425 25.111335042346994 24.900568994505687 24.43363545594307 38 24.563380229701774 24.672915824617547 25.608720768207178 25.1549831774735 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 34.5 2 48.0 3 48.0 4 168.0 5 288.0 6 288.0 7 458.0 8 628.0 9 741.0 10 854.0 11 854.0 12 1153.5 13 1453.0 14 2038.5 15 2624.0 16 2624.0 17 3872.0 18 5120.0 19 5120.0 20 6138.5 21 7157.0 22 8084.0 23 9011.0 24 9011.0 25 10628.5 26 12246.0 27 12246.0 28 15372.5 29 18499.0 30 22050.5 31 25602.0 32 25602.0 33 31954.5 34 38307.0 35 38307.0 36 42626.0 37 46945.0 38 53255.0 39 59565.0 40 59565.0 41 63871.0 42 68177.0 43 76721.5 44 85266.0 45 85266.0 46 86531.0 47 87796.0 48 87796.0 49 92979.0 50 98162.0 51 99227.0 52 100292.0 53 100292.0 54 95303.5 55 90315.0 56 90315.0 57 87475.0 58 84635.0 59 75943.5 60 67252.0 61 67252.0 62 63607.0 63 59962.0 64 50628.5 65 41295.0 66 41295.0 67 35049.5 68 28804.0 69 28804.0 70 23169.5 71 17535.0 72 13802.0 73 10069.0 74 10069.0 75 7717.0 76 5365.0 77 5365.0 78 4957.0 79 4549.0 80 3591.0 81 2633.0 82 2633.0 83 2329.5 84 2026.0 85 2026.0 86 1341.5 87 657.0 88 515.5 89 374.0 90 374.0 91 226.5 92 79.0 93 54.5 94 30.0 95 30.0 96 23.5 97 17.0 98 17.0 99 12.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010335287810081705 2 0.0 3 0.0 4 9.227935544715808E-5 5 0.0 6 2.7683806634147426E-4 7 4.6139677723579036E-4 8 0.002122425175284636 9 0.004890805838699378 10 4.6139677723579036E-4 11 0.00479852648325222 12 6.459554881301066E-4 13 3.691174217886323E-4 14 0.0 15 0.0 16 9.227935544715808E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 9.227935544715808E-5 22 9.227935544715808E-5 23 1.8455871089431616E-4 24 0.0 25 0.0 26 9.227935544715808E-5 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1083666.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.81261138292202 #Duplication Level Percentage of deduplicated Percentage of total 1 79.7806916289401 46.12330121004654 2 13.10713103063236 15.155149452379737 3 3.5664323603459303 6.185543042164696 4 1.3205138685269646 3.053694204276335 5 0.636870267622974 1.840956664171227 6 0.3542223874524205 1.228711273735057 7 0.22581537590770492 0.9138483600148418 8 0.1491288987555044 0.6897224855772078 9 0.11513818894963045 0.5990795435770588 >10 0.5804506171119108 6.326145829885689 >50 0.07347503468089817 2.9569473027555246 >100 0.07938526610955064 9.671448781526145 >500 0.008339461166237653 3.3590276638438845 >1k 0.0024056137979531693 1.8964241860460629 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2690 0.2482314661528552 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2003 0.18483554896065763 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1634 0.1507844668006563 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1608 0.14838520355903018 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1284 0.11848669239415095 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1241 0.11451868010992318 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1241 0.11451868010992318 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1177 0.10861280136130506 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1145 0.105659861986996 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1113 0.10270692261268695 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1110 0.10243008454634546 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1107 0.102153246480004 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.227935544715808E-5 2 0.0 0.0 0.0 9.227935544715808E-5 9.227935544715808E-5 3 0.0 0.0 0.0 3.691174217886323E-4 9.227935544715808E-5 4 0.0 0.0 0.0 3.691174217886323E-4 1.8455871089431616E-4 5 0.0 0.0 0.0 3.691174217886323E-4 2.768380663414742E-4 6 0.0 0.0 0.0 3.691174217886323E-4 2.768380663414742E-4 7 0.0 0.0 0.0 4.6139677723579036E-4 2.768380663414742E-4 8 0.0 0.0 0.0 5.536761326829484E-4 2.768380663414742E-4 9 0.0 0.0 0.0 6.459554881301065E-4 2.768380663414742E-4 10 0.0 0.0 0.0 6.459554881301065E-4 2.768380663414742E-4 11 0.0 0.0 0.0 6.459554881301065E-4 2.768380663414742E-4 12 0.0 0.0 0.0 6.459554881301065E-4 4.6139677723579036E-4 13 0.0 0.0 0.0 6.459554881301065E-4 5.536761326829484E-4 14 0.0 0.0 0.0 7.382348435772646E-4 6.459554881301065E-4 15 0.0 0.0 0.0 7.382348435772646E-4 7.382348435772646E-4 16 0.0 0.0 0.0 7.382348435772646E-4 7.382348435772646E-4 17 0.0 0.0 0.0 7.382348435772646E-4 7.382348435772646E-4 18 0.0 0.0 0.0 8.305141990244227E-4 0.0010150729099187388 19 0.0 0.0 0.0 9.227935544715807E-4 0.0010150729099187388 20 0.0 0.0 0.0 9.227935544715807E-4 0.001291910976260213 21 0.0 0.0 0.0 9.227935544715807E-4 0.001291910976260213 22 0.0 0.0 0.0 0.0014764696871545292 0.001291910976260213 23 0.0 0.0 0.0 0.0023992632416261097 0.001291910976260213 24 0.0 0.0 0.0 0.0032297774406505326 0.0013841903317073712 25 0.0 0.0 0.0 0.003506615506992007 0.0013841903317073712 26 0.0 0.0 0.0 0.0039680122842277975 0.0013841903317073712 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTTCG 210 0.0 20.57039 32 AAACGCT 220 0.0 20.362608 29 CGTCTTA 65 9.437108E-6 19.691315 15 CTAGCGG 215 0.0 19.347862 29 TCTAGCG 220 0.0 18.908134 28 TAAACGC 230 0.0 18.781662 28 TAGCGGC 240 0.0 17.332458 30 GTAAACG 250 0.0 17.279127 27 AACGCTT 255 0.0 16.940321 30 CCGTGCT 115 1.8373612E-8 16.697893 9 CTAAGAC 125 2.8539944E-9 16.639927 3 ACGCTTC 265 0.0 16.301064 31 GTTCAAA 415 0.0 16.191954 1 TATTCTG 110 2.0168409E-7 16.001408 5 TACACCG 80 5.6161538E-5 16.001408 5 TAACGAA 150 1.1459633E-10 15.99993 13 ACGAACG 160 1.8189894E-11 15.999193 15 GCGCAAG 385 0.0 15.7914095 1 ATCGTTT 225 0.0 15.643656 29 GATAACG 165 2.910383E-11 15.517232 11 >>END_MODULE