##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063074_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 610494 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.113057622187934 32.0 32.0 32.0 32.0 32.0 2 31.288998745278413 32.0 32.0 32.0 32.0 32.0 3 31.37133698283685 32.0 32.0 32.0 32.0 32.0 4 31.467408361097736 32.0 32.0 32.0 32.0 32.0 5 31.402705022489982 32.0 32.0 32.0 32.0 32.0 6 34.90174023004321 36.0 36.0 36.0 36.0 36.0 7 34.93526390103752 36.0 36.0 36.0 36.0 36.0 8 34.852773327829595 36.0 36.0 36.0 32.0 36.0 9 34.97959357503923 36.0 36.0 36.0 36.0 36.0 10 34.83098441589925 36.0 36.0 36.0 32.0 36.0 11 34.99577063820447 36.0 36.0 36.0 36.0 36.0 12 34.894985044898064 36.0 36.0 36.0 32.0 36.0 13 34.943663655990065 36.0 36.0 36.0 36.0 36.0 14 34.87519779064168 36.0 36.0 36.0 32.0 36.0 15 34.852809364219794 36.0 36.0 36.0 32.0 36.0 16 34.85839991875432 36.0 36.0 36.0 32.0 36.0 17 34.827264477619764 36.0 36.0 36.0 32.0 36.0 18 34.795285457350936 36.0 36.0 36.0 32.0 36.0 19 34.80603904379077 36.0 36.0 36.0 32.0 36.0 20 34.79271868355791 36.0 36.0 36.0 32.0 36.0 21 34.76349644713953 36.0 36.0 36.0 32.0 36.0 22 34.75132106130445 36.0 36.0 36.0 32.0 36.0 23 34.68312546888258 36.0 36.0 36.0 32.0 36.0 24 34.66109904438045 36.0 36.0 36.0 32.0 36.0 25 34.63964920212156 36.0 36.0 36.0 32.0 36.0 26 34.574606793842364 36.0 36.0 36.0 32.0 36.0 27 34.54387758110645 36.0 36.0 36.0 32.0 36.0 28 34.507253142537024 36.0 36.0 36.0 32.0 36.0 29 34.46360979796689 36.0 36.0 36.0 32.0 36.0 30 34.436204123218246 36.0 36.0 36.0 32.0 36.0 31 34.429404711594216 36.0 36.0 36.0 32.0 36.0 32 34.38288173184339 36.0 36.0 36.0 32.0 36.0 33 34.32001133508274 36.0 36.0 36.0 32.0 36.0 34 34.28573089989418 36.0 36.0 36.0 32.0 36.0 35 34.23016606223812 36.0 36.0 36.0 32.0 36.0 36 34.19372508165518 36.0 36.0 36.0 32.0 36.0 37 34.166810812227475 36.0 36.0 36.0 32.0 36.0 38 33.73051168398052 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 7.0 21 26.0 22 67.0 23 185.0 24 497.0 25 1107.0 26 2396.0 27 4787.0 28 8053.0 29 12545.0 30 18329.0 31 26355.0 32 36701.0 33 57885.0 34 136792.0 35 304758.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.63023987654786 18.358427295765832 12.123406269913946 25.887926557772357 2 15.646836823949128 21.217079938541573 36.203631812925266 26.932451424584023 3 17.891412528214858 25.508358804509136 28.80781793105256 27.79241073622345 4 11.866966533604808 16.182658933026257 35.794349812364764 36.15602472100417 5 13.842887890790081 37.29307740944219 32.842583219491104 16.021451480276628 6 33.6350025880765 35.925941699481726 16.65820354730283 13.780852165138938 7 29.421303765972745 31.157114004583182 21.198441259768742 18.223140969675327 8 28.727628333022103 31.895289295998897 19.702792219918035 19.674290151060962 9 27.807454219924548 13.88677304319765 18.618677648315323 39.68709508856247 10 16.113640049206456 26.49826614402553 31.007929708807204 26.38016409796082 11 37.509562414102085 21.154762860320773 22.036388773766795 19.299285951810347 12 24.66445206668698 24.310967839159762 28.343439902767265 22.681140191385992 13 29.75852342529165 19.156453626079863 25.603855238544522 25.481167710083962 14 24.223989097353947 19.710267422775654 25.060688557135695 31.005054922734704 15 25.35864398339705 26.581751827208784 23.331269430985397 24.728334758408764 16 25.84419477373205 25.500538089707824 23.96571295657772 24.689554179982405 17 23.780086290774356 25.422690476892484 25.722283920890295 25.07493931144286 18 25.253810848263864 23.72029864339371 27.164722339613494 23.86116816872893 19 25.280674339141747 25.051843261358837 26.22187933050939 23.44560306899003 20 25.59058729487923 23.16091558639397 26.358817613277118 24.889679505449685 21 27.36100168224697 23.744416397894817 24.69856329229 24.19601862756821 22 25.616304173341586 23.97550180673356 25.591078700200164 24.81711531972468 23 23.73557108762918 23.60911591123895 26.323479548496053 26.331833452635824 24 24.346676625814503 25.173547979177517 25.773062470720433 24.706712924287544 25 24.880179002578238 23.716367400826215 25.919009851038666 25.484443745556877 26 24.185371494841053 24.738203386443416 26.57999354619955 24.496431572515984 27 25.422199071571548 24.438241817282396 25.608933093527536 24.530626017618516 28 24.175995177675784 23.946836496345583 26.83875681005874 25.038411515919893 29 24.04872119955315 24.724239714067625 26.818117786579393 24.408921299799836 30 24.335046699885666 24.548644212719537 26.981755758451353 24.134553328943444 31 24.425629080711687 24.551265041097864 25.550292058562412 25.472813819628037 32 24.234144807319975 24.69491919658506 25.512781452397565 25.5581545436974 33 23.81235524018254 24.26444813544441 26.241699345120512 25.68149727925254 34 24.594344907566658 24.507038562213552 26.638099637342872 24.260516892876915 35 26.03530911032705 24.05871310774553 26.156194819277502 23.74978296264992 36 24.299337913230925 25.10720826085105 25.773062470720433 24.820391355197593 37 25.430552962027477 25.101475198773453 25.642184853577593 23.82578698562148 38 24.220385458333745 24.640864611282012 26.127857112436814 25.010892817947433 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 580.0 1 392.5 2 205.0 3 205.0 4 674.5 5 1144.0 6 1144.0 7 1260.5 8 1377.0 9 1324.5 10 1272.0 11 1272.0 12 1557.5 13 1843.0 14 2277.0 15 2711.0 16 2711.0 17 4009.5 18 5308.0 19 5308.0 20 5669.0 21 6030.0 22 5739.5 23 5449.0 24 5449.0 25 5727.5 26 6006.0 27 6006.0 28 7582.5 29 9159.0 30 11007.0 31 12855.0 32 12855.0 33 16346.0 34 19837.0 35 19837.0 36 21294.5 37 22752.0 38 26577.5 39 30403.0 40 30403.0 41 32755.5 42 35108.0 43 40675.5 44 46243.0 45 46243.0 46 50431.0 47 54619.0 48 54619.0 49 56113.0 50 57607.0 51 56543.5 52 55480.0 53 55480.0 54 52734.0 55 49988.0 56 49988.0 57 48830.0 58 47672.0 59 43035.5 60 38399.0 61 38399.0 62 37156.0 63 35913.0 64 29686.0 65 23459.0 66 23459.0 67 19598.5 68 15738.0 69 15738.0 70 12739.0 71 9740.0 72 7500.0 73 5260.0 74 5260.0 75 3877.5 76 2495.0 77 2495.0 78 2492.5 79 2490.0 80 1919.5 81 1349.0 82 1349.0 83 1320.5 84 1292.0 85 1292.0 86 841.0 87 390.0 88 322.0 89 254.0 90 254.0 91 150.0 92 46.0 93 29.0 94 12.0 95 12.0 96 8.0 97 4.0 98 4.0 99 4.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009009097550508277 2 0.0 3 0.0 4 1.6380177364560503E-4 5 0.0 6 3.2760354729121006E-4 7 1.6380177364560503E-4 8 0.0019656212837472604 9 0.0034398372465577055 10 8.190088682280251E-4 11 0.005077854983013756 12 0.0 13 0.0 14 0.0 15 0.0 16 1.6380177364560503E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 1.6380177364560503E-4 22 0.0 23 1.6380177364560503E-4 24 0.0 25 0.0 26 1.6380177364560503E-4 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 610494.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.736823116767575 #Duplication Level Percentage of deduplicated Percentage of total 1 80.11572994623292 41.44933349098971 2 12.420101877617862 12.851532278690964 3 3.3734664512173307 5.235973112309419 4 1.3082395169762144 2.7073662593665544 5 0.6716257745701949 1.7373891949800095 6 0.4092406250980845 1.2703685899736994 7 0.26723168535267683 0.967800290540099 8 0.19569912261787492 0.8099880712790083 9 0.13149224610477958 0.6122691970154506 >10 0.8421626412366415 8.576350009931812 >50 0.12519662585466615 4.63404684916745 >100 0.1280564438856541 13.41650900684491 >500 0.00985049568351183 3.5827224701160483 >1k 0.0019065475516474508 2.148351178794866 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3584 0.5870655567458485 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2907 0.47617175598777384 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1857 0.3041798936598885 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1760 0.28829112161626486 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1646 0.26961771942066587 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1314 0.21523553057032505 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 936 0.1533184601322863 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 932 0.1526632530377039 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 916 0.15004242465937423 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 886 0.14512837145000604 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 875 0.1433265519399044 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 836 0.1369382827677258 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 829 0.13579167035220657 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 789 0.12923959940638235 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 788 0.12907579763273677 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 757 0.12399794264972301 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 739 0.12104951072410212 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 733 0.12006670008222849 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 712 0.11662686283567078 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 708 0.11597165574108836 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 686 0.11236801672088505 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 678 0.11105760253172021 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 675 0.11056619721078341 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 649 0.10630735109599766 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 639 0.10466933335954161 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 624 0.10221230675485754 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.6380177364560503E-4 13 0.0 0.0 0.0 0.0 1.6380177364560503E-4 14 0.0 0.0 0.0 0.0 1.6380177364560503E-4 15 0.0 0.0 0.0 1.6380177364560503E-4 3.2760354729121006E-4 16 0.0 0.0 0.0 1.6380177364560503E-4 3.2760354729121006E-4 17 0.0 0.0 0.0 1.6380177364560503E-4 3.2760354729121006E-4 18 0.0 0.0 0.0 3.2760354729121006E-4 3.2760354729121006E-4 19 0.0 0.0 0.0 3.2760354729121006E-4 3.2760354729121006E-4 20 0.0 0.0 0.0 3.2760354729121006E-4 3.2760354729121006E-4 21 0.0 0.0 0.0 4.914053209368151E-4 3.2760354729121006E-4 22 0.0 0.0 0.0 8.190088682280251E-4 3.2760354729121006E-4 23 0.0 0.0 0.0 0.0029484319256208908 3.2760354729121006E-4 24 0.0 0.0 0.0 0.005733062077596177 3.2760354729121006E-4 25 0.0 0.0 0.0 0.006060665624887386 3.2760354729121006E-4 26 0.0 0.0 0.0 0.0076986833613434365 4.914053209368151E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGCGTT 40 1.5916671E-4 24.001537 7 TAAGACT 40 1.5916671E-4 24.001537 4 ATATTAT 50 2.7952212E-5 22.3996 1 TAGGACG 55 5.8246846E-5 20.364939 4 AAGGCCG 40 0.0044794534 20.00128 5 TACCGTC 170 0.0 19.76597 7 CGTCGTA 180 0.0 19.555206 10 ACCCGTT 90 2.033994E-8 19.555206 30 GTCGAAG 50 7.1915204E-4 19.199656 1 AATGCCG 50 7.1915204E-4 19.199656 18 CCGTCGT 170 0.0 18.824734 9 ACCGTCG 170 0.0 18.824734 8 GTGTATA 80 2.7923033E-6 17.999678 1 ATACCGT 205 0.0 17.952368 6 CTATATG 45 0.008842393 17.778915 3 TAATACT 135 2.3646862E-11 17.778913 4 GTTTAAG 45 0.008846566 17.77746 1 TCGGCAA 45 0.008846566 17.77746 13 TAACCCG 90 4.3592627E-7 17.77746 28 GTCGTAG 180 0.0 17.77746 11 >>END_MODULE