##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063073_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1259539 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.154110353073623 32.0 32.0 32.0 32.0 32.0 2 31.17425740687664 32.0 32.0 32.0 32.0 32.0 3 31.30812384531166 32.0 32.0 32.0 32.0 32.0 4 31.409179072660713 32.0 32.0 32.0 32.0 32.0 5 31.335452097950125 32.0 32.0 32.0 32.0 32.0 6 34.840683773983976 36.0 36.0 36.0 32.0 36.0 7 34.872186569848175 36.0 36.0 36.0 32.0 36.0 8 34.78913316697617 36.0 36.0 36.0 32.0 36.0 9 34.93529616788365 36.0 36.0 36.0 32.0 36.0 10 34.74966317041394 36.0 36.0 36.0 32.0 36.0 11 34.943164919863534 36.0 36.0 36.0 36.0 36.0 12 34.83267052469197 36.0 36.0 36.0 32.0 36.0 13 34.903215382770995 36.0 36.0 36.0 32.0 36.0 14 34.8358955141524 36.0 36.0 36.0 32.0 36.0 15 34.80459358543086 36.0 36.0 36.0 32.0 36.0 16 34.82571321729617 36.0 36.0 36.0 32.0 36.0 17 34.786717203675316 36.0 36.0 36.0 32.0 36.0 18 34.78106037208852 36.0 36.0 36.0 32.0 36.0 19 34.78092698995426 36.0 36.0 36.0 32.0 36.0 20 34.77286451630319 36.0 36.0 36.0 32.0 36.0 21 34.769123465013784 36.0 36.0 36.0 32.0 36.0 22 34.75168692672478 36.0 36.0 36.0 32.0 36.0 23 34.68076415259869 36.0 36.0 36.0 32.0 36.0 24 34.67031826723905 36.0 36.0 36.0 32.0 36.0 25 34.65292777754401 36.0 36.0 36.0 32.0 36.0 26 34.57886178990885 36.0 36.0 36.0 32.0 36.0 27 34.57337803752008 36.0 36.0 36.0 32.0 36.0 28 34.54119642186546 36.0 36.0 36.0 32.0 36.0 29 34.500749083593284 36.0 36.0 36.0 32.0 36.0 30 34.480153452969695 36.0 36.0 36.0 32.0 36.0 31 34.486757456497976 36.0 36.0 36.0 32.0 36.0 32 34.442931898099225 36.0 36.0 36.0 32.0 36.0 33 34.41993618300029 36.0 36.0 36.0 32.0 36.0 34 34.39688251018825 36.0 36.0 36.0 32.0 36.0 35 34.36811404807632 36.0 36.0 36.0 32.0 36.0 36 34.347310404838595 36.0 36.0 36.0 32.0 36.0 37 34.34641563302129 36.0 36.0 36.0 32.0 36.0 38 33.907626520496784 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 3.0 21 33.0 22 100.0 23 280.0 24 844.0 25 2132.0 26 4459.0 27 8831.0 28 15326.0 29 24574.0 30 37191.0 31 53906.0 32 78290.0 33 125466.0 34 298132.0 35 609972.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.157499396541866 18.281287716133292 11.976817679417632 26.584395207907207 2 15.91399710529011 20.216126693972953 36.49065253239479 27.379223668342146 3 18.219840751258992 23.89040752211722 28.442231641894377 29.447520084729412 4 12.113737031941103 15.775796979366227 35.74948572372229 36.36098026497038 5 14.293097945437136 36.84739960207632 33.085702852950845 15.773799599535703 6 35.002119824888176 35.51206871090828 16.112098245547177 13.373713218656363 7 30.66845463235551 30.211697678185228 20.34192064989218 18.77792703956708 8 28.449588645635004 33.11279573290311 18.837505101238747 19.600110520223136 9 27.20633655316534 13.95998049998174 18.087934284303277 40.745748662549644 10 15.689168535757528 26.714674182727617 31.272900498203686 26.323256783311166 11 38.39741543718906 20.959794454527987 21.487235187911182 19.155554920371774 12 24.5919132124846 23.573045947078924 28.374337851399247 23.460702989037234 13 29.527857877821674 19.01065154152005 25.096225911764332 26.36526466889394 14 23.46247317470916 19.402416280877368 24.743814998979786 32.391295545433685 15 25.287823560842497 27.059265334380278 21.872764559096623 25.780146545680605 16 26.135594054650152 25.806981760787085 23.11623538453355 24.941188800029217 17 24.372647452758507 25.909479579433427 24.61384681220669 25.10402615560137 18 25.350147950956657 24.72142585501521 25.5737218140923 24.354704379935836 19 25.74283130573964 24.93007362217446 24.985252540810563 24.341842531275333 20 25.832308487470417 24.275389646529405 24.700624593601308 25.19167727239887 21 27.12592008015644 24.05288610020984 24.252959619288674 24.56823420034505 22 25.940522683299207 24.137561441130444 24.82630549748757 25.09561037808277 23 24.430684559985835 23.94090218722882 25.538629609722285 26.089783643063058 24 24.91737056176903 24.90323840706798 24.91093963743878 25.268451393724213 25 25.039974974951136 24.468019226097187 25.025445838077136 25.46655996087454 26 24.90220628341004 25.124430446377605 25.282504154297726 24.69085911591463 27 25.606749771146426 24.48848348483056 24.640443844930566 25.264322899092445 28 24.62265956036296 24.521829018394826 25.511873788743344 25.343637632498872 29 24.69617852245941 24.80518665956354 25.34975098031899 25.148883837658065 30 24.57414974843971 25.016930797696617 25.573086661072026 24.83583279279165 31 25.30330541571162 24.707373094441696 24.499519268557783 25.489802221288897 32 25.020900504073317 24.69355851625079 24.47284284170637 25.812698137969527 33 24.538739967559557 24.333823724394403 25.154044455947773 25.973391852098267 34 25.408502634694123 24.49761380949697 25.161507503935965 24.932376051872946 35 25.970533663507045 24.321120663988967 25.118475886812558 24.58986978569143 36 24.68895365685382 25.087432782946777 24.738971957200214 25.48464160299919 37 25.8007096247119 24.75207198824332 24.692288210210243 24.75493017683454 38 24.82162124396307 24.459584022408198 25.17786269420796 25.54093203942077 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 34.0 2 44.0 3 44.0 4 186.5 5 329.0 6 329.0 7 416.5 8 504.0 9 549.5 10 595.0 11 595.0 12 832.5 13 1070.0 14 1605.5 15 2141.0 16 2141.0 17 3228.0 18 4315.0 19 4315.0 20 5568.0 21 6821.0 22 7635.0 23 8449.0 24 8449.0 25 10191.0 26 11933.0 27 11933.0 28 15025.5 29 18118.0 30 22399.5 31 26681.0 32 26681.0 33 33637.0 34 40593.0 35 40593.0 36 45853.0 37 51113.0 38 58533.0 39 65953.0 40 65953.0 41 71539.5 42 77126.0 43 87867.5 44 98609.0 45 98609.0 46 101412.5 47 104216.0 48 104216.0 49 111534.0 50 118852.0 51 120991.0 52 123130.0 53 123130.0 54 117681.0 55 112232.0 56 112232.0 57 108543.5 58 104855.0 59 94164.0 60 83473.0 61 83473.0 62 78156.5 63 72840.0 64 60631.5 65 48423.0 66 48423.0 67 40292.5 68 32162.0 69 32162.0 70 25658.5 71 19155.0 72 14800.0 73 10445.0 74 10445.0 75 7753.0 76 5061.0 77 5061.0 78 4800.5 79 4540.0 80 3528.5 81 2517.0 82 2517.0 83 2318.0 84 2119.0 85 2119.0 86 1354.5 87 590.0 88 488.0 89 386.0 90 386.0 91 225.5 92 65.0 93 50.5 94 36.0 95 36.0 96 24.0 97 12.0 98 12.0 99 12.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01040063070694913 2 0.0 3 0.0 4 1.5878825506792564E-4 5 7.939412753396282E-5 6 7.939412753396282E-5 7 5.557588927377397E-4 8 0.0032551592288924754 9 0.00420788875930003 10 0.0011115177854754794 11 0.004843041779571732 12 2.3818238260188846E-4 13 2.3818238260188846E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.5878825506792564E-4 22 0.0 23 0.0 24 0.0 25 7.939412753396282E-5 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1259539.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.160971145604236 #Duplication Level Percentage of deduplicated Percentage of total 1 80.21596372696398 45.85222388013824 2 12.359288559185275 14.12937873423572 3 3.3612732251490716 5.764009255057146 4 1.3775860634713721 3.149766288986945 5 0.685155345442079 1.9582072465535592 6 0.40389178539717174 1.385210801462059 7 0.29099694446341057 1.1643567562152406 8 0.20292193729209576 0.9279372001890879 9 0.15404323084947102 0.7924734606386038 >10 0.801292807769452 8.244701346209077 >50 0.06803520199883911 2.7285714431926893 >100 0.06740916230273446 8.146385567461238 >500 0.009211179783875284 3.5436390293134985 >1k 0.002930829931233045 2.21313899034703 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2409 0.19126045322931645 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1797 0.1426712471785312 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1674 0.13290576949185376 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1569 0.12456938610078767 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1442 0.11448633190397439 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1399 0.11107238442001398 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1394 0.11067541378234419 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1385 0.10996086663453851 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1318 0.104641460089763 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1268 0.10067175371306486 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 2.3818238260188846E-4 7 0.0 0.0 0.0 0.0 2.3818238260188846E-4 8 0.0 0.0 0.0 0.0 2.3818238260188846E-4 9 0.0 0.0 0.0 0.0 2.3818238260188846E-4 10 0.0 0.0 0.0 0.0 2.3818238260188846E-4 11 0.0 0.0 0.0 0.0 2.3818238260188846E-4 12 0.0 0.0 0.0 1.5878825506792564E-4 3.969706376698141E-4 13 0.0 0.0 0.0 1.5878825506792564E-4 3.969706376698141E-4 14 0.0 0.0 0.0 1.5878825506792564E-4 3.969706376698141E-4 15 0.0 0.0 0.0 1.5878825506792564E-4 7.145471478056654E-4 16 0.0 0.0 0.0 1.5878825506792564E-4 7.145471478056654E-4 17 0.0 0.0 0.0 1.5878825506792564E-4 7.145471478056654E-4 18 0.0 0.0 0.0 1.5878825506792564E-4 8.733354028735911E-4 19 0.0 0.0 0.0 2.3818238260188846E-4 8.733354028735911E-4 20 0.0 0.0 0.0 2.3818238260188846E-4 0.0010321236579415166 21 0.0 0.0 0.0 3.175765101358513E-4 0.0010321236579415166 22 0.0 0.0 0.0 3.969706376698141E-4 0.0010321236579415166 23 0.0 7.939412753396282E-5 0.0 7.939412753396282E-4 0.0011115177854754796 24 0.0 7.939412753396282E-5 0.0 0.001349700168077368 0.0011909119130094424 25 0.0 7.939412753396282E-5 0.0 0.0015084884231452936 0.0011909119130094424 26 0.0 7.939412753396282E-5 0.0 0.002223035570950959 0.0012703060405434051 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATAA 160 0.0 18.000536 9 CGATAAC 160 0.0 18.000536 10 TCTAGCG 320 0.0 17.499826 28 CGGTCCA 365 0.0 17.0964 10 TAACGAA 150 5.456968E-12 17.067175 13 CTAGCGG 320 0.0 16.999832 29 GTAGTAA 95 7.691433E-7 16.842606 1 GTGTAGG 145 6.91216E-11 16.552216 1 ACGAACG 165 1.8189894E-12 16.484684 15 TAGGACG 90 8.582912E-6 15.999843 4 TAGCGGC 350 0.0 15.999842 30 CTAGATA 285 0.0 15.719143 3 GCCGGTC 410 0.0 15.610221 8 CGCTTCG 330 0.0 15.5149975 32 ACCGTCG 300 0.0 15.467127 8 GTATCAA 1875 0.0 15.275122 1 TCTAGAT 315 0.0 15.237945 2 CGCCGGT 400 0.0 15.200452 7 GTAAACG 350 0.0 15.085565 27 GTACCGT 85 9.4309326E-5 15.059273 11 >>END_MODULE