##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063070_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 426206 Sequences flagged as poor quality 0 Sequence length 38 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.047305762940926 32.0 32.0 32.0 32.0 32.0 2 31.305382843038345 32.0 32.0 32.0 32.0 32.0 3 31.39692308414241 32.0 32.0 32.0 32.0 32.0 4 31.49466455188336 32.0 32.0 32.0 32.0 32.0 5 31.408689694654697 32.0 32.0 32.0 32.0 32.0 6 34.92154732687949 36.0 36.0 36.0 36.0 36.0 7 34.96717315101148 36.0 36.0 36.0 36.0 36.0 8 34.911146253220274 36.0 36.0 36.0 36.0 36.0 9 34.982834591723254 36.0 36.0 36.0 36.0 36.0 10 34.860154479289356 36.0 36.0 36.0 32.0 36.0 11 35.03127360947523 36.0 36.0 36.0 36.0 36.0 12 34.92947307170711 36.0 36.0 36.0 36.0 36.0 13 34.972989587194924 36.0 36.0 36.0 36.0 36.0 14 34.914313735611415 36.0 36.0 36.0 32.0 36.0 15 34.88687160668785 36.0 36.0 36.0 32.0 36.0 16 34.88774442405785 36.0 36.0 36.0 32.0 36.0 17 34.85252671243483 36.0 36.0 36.0 32.0 36.0 18 34.841956706381424 36.0 36.0 36.0 32.0 36.0 19 34.82839753546407 36.0 36.0 36.0 32.0 36.0 20 34.81657930672022 36.0 36.0 36.0 32.0 36.0 21 34.77910212432486 36.0 36.0 36.0 32.0 36.0 22 34.7867040820636 36.0 36.0 36.0 32.0 36.0 23 34.692486731768206 36.0 36.0 36.0 32.0 36.0 24 34.68652013345659 36.0 36.0 36.0 32.0 36.0 25 34.670025762190114 36.0 36.0 36.0 32.0 36.0 26 34.60062974242503 36.0 36.0 36.0 32.0 36.0 27 34.56903469214417 36.0 36.0 36.0 32.0 36.0 28 34.5205604801434 36.0 36.0 36.0 32.0 36.0 29 34.47520682486873 36.0 36.0 36.0 32.0 36.0 30 34.442846886247494 36.0 36.0 36.0 32.0 36.0 31 34.42561578203967 36.0 36.0 36.0 32.0 36.0 32 34.3658864492757 36.0 36.0 36.0 32.0 36.0 33 34.29628161030112 36.0 36.0 36.0 32.0 36.0 34 34.264559860724624 36.0 36.0 36.0 32.0 36.0 35 34.17862958287776 36.0 36.0 36.0 32.0 36.0 36 34.13531484774968 36.0 36.0 36.0 32.0 36.0 37 34.100568739060456 36.0 36.0 36.0 32.0 36.0 38 33.64283233929133 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 2.0 21 13.0 22 35.0 23 108.0 24 264.0 25 705.0 26 1587.0 27 3094.0 28 5501.0 29 8612.0 30 13040.0 31 18535.0 32 26016.0 33 40796.0 34 95019.0 35 212878.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.14128402048914 18.23373856402387 12.610957419100515 25.014019996386477 2 14.686325391946617 21.89692308414241 37.43706095174634 25.979690572164632 3 18.176421730336973 26.795024002477675 28.905271159955515 26.123283107229838 4 11.704199377765681 16.69521311290784 36.203619845802265 35.39696766352421 5 13.084752443654008 38.19491044236825 33.29375935580447 15.426577758173277 6 32.49891484144954 36.19431963491747 17.453572811205873 13.853192712427118 7 28.194882744219328 31.586677772433454 21.928883987752375 18.289555495594843 8 28.362638961233984 32.58180470110136 20.185453709308817 18.870102628355834 9 27.67762659289658 14.218105112989775 18.77922705654064 39.325041237573 10 15.68970654828802 27.473058612914503 31.908738324225776 24.928496514571695 11 36.53957609361325 21.779580880334322 22.26623085604875 19.414612170003682 12 24.12078694524935 24.65926021515468 29.814056615947727 21.405896223648245 13 30.274469502867174 20.01342080318345 25.70553068483637 24.006579009113008 14 23.950390186904926 19.967808993772966 26.214318897434573 29.86748192188754 15 24.928790303280575 26.92923140453208 24.87482578846849 23.267152503718858 16 24.50528617616833 25.976405775610857 25.753508866604413 23.764799181616404 17 22.823939597283943 25.749050928424282 27.317775911179098 24.10923356311267 18 24.113222244642262 24.03673341060426 29.108224661314015 22.741819683439463 19 24.268780824296233 25.905313393054065 27.423358657550573 22.402547125099133 20 24.599841391252117 23.750252225449664 28.418652013345657 23.23125436995256 21 25.91258687113743 24.62705827698343 25.88349295880396 23.57686189307518 22 24.297170851653895 24.785901653191182 26.85274257049408 24.064184924660843 23 22.881946481153438 24.46803768139745 27.238066188805853 25.411949648643255 24 23.279822433283435 26.290338474822033 27.01393222995453 23.41590686194 25 24.418004439167916 24.432082138684112 26.8830096244539 24.266903797694074 26 22.83614027019798 25.37622651957035 28.046296861142267 23.741336349089405 27 24.46146807287573 25.463568001313924 27.122628781924192 22.952335143886156 28 23.333317691444982 24.526402725442626 27.970511912080077 24.169767671032318 29 22.767863427544427 25.349244262164305 28.33958226772969 23.543310042561576 30 23.635284346067394 25.18406592117427 28.271774681726676 22.90887505103166 31 23.08226538340615 25.220433311591105 27.185210907401586 24.51209039760116 32 22.724926444020028 26.067910822466132 27.103325621882373 24.103837111631464 33 22.654537946439046 25.37247246636603 27.560381599508222 24.412607987686705 34 23.081561498430336 25.812165947921894 28.04066578133579 23.06560677231198 35 24.527106610418436 25.423152184624335 27.340065602079743 22.709675602877482 36 23.18714424480181 26.53294416315115 26.869635809913518 23.41027578213352 37 24.214581681158876 26.271098952149902 27.03223323932559 22.48208612736564 38 23.404934245257564 25.926725402095236 26.71906711558992 23.949273237057284 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 270.0 1 221.5 2 173.0 3 173.0 4 676.0 5 1179.0 6 1179.0 7 1317.0 8 1455.0 9 1391.5 10 1328.0 11 1328.0 12 1621.0 13 1914.0 14 2249.0 15 2584.0 16 2584.0 17 3770.0 18 4956.0 19 4956.0 20 5263.0 21 5570.0 22 5151.0 23 4732.0 24 4732.0 25 5011.5 26 5291.0 27 5291.0 28 6880.0 29 8469.0 30 10124.5 31 11780.0 32 11780.0 33 13940.0 34 16100.0 35 16100.0 36 17308.5 37 18517.0 38 21050.5 39 23584.0 40 23584.0 41 24833.5 42 26083.0 43 29376.5 44 32670.0 45 32670.0 46 38086.5 47 43503.0 48 43503.0 49 42530.5 50 41558.0 51 38661.5 52 35765.0 53 35765.0 54 33571.0 55 31377.0 56 31377.0 57 30358.5 58 29340.0 59 26192.5 60 23045.0 61 23045.0 62 21745.0 63 20445.0 64 16861.5 65 13278.0 66 13278.0 67 10943.0 68 8608.0 69 8608.0 70 6857.0 71 5106.0 72 3989.5 73 2873.0 74 2873.0 75 2144.0 76 1415.0 77 1415.0 78 1437.5 79 1460.0 80 1093.5 81 727.0 82 727.0 83 707.5 84 688.0 85 688.0 86 429.0 87 170.0 88 156.0 89 142.0 90 142.0 91 83.0 92 24.0 93 19.5 94 15.0 95 15.0 96 12.0 97 9.0 98 9.0 99 6.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006804221432828256 2 0.0 3 0.0 4 0.0 5 0.0 6 2.346283252699399E-4 7 2.346283252699399E-4 8 0.0018770266021595193 9 0.003988681529588979 10 7.038849758098197E-4 11 0.0063349647822883775 12 2.346283252699399E-4 13 4.692566505398798E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 2.346283252699399E-4 24 0.0 25 0.0 26 0.0 27 2.346283252699399E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 2.346283252699399E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 426206.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.195561711798305 #Duplication Level Percentage of deduplicated Percentage of total 1 81.72973192042929 45.92848193823216 2 11.682535963253718 13.130133413466549 3 3.0488434997455998 5.13994419118707 4 1.1660309599880732 2.6210305907950873 5 0.5873878081475513 1.650429391075683 6 0.33510648632916107 1.129889833952056 7 0.20554274550927454 0.8085413027775225 8 0.14142823824475284 0.6358111432059138 9 0.11949909604322272 0.6043786943580931 >10 0.7612919849843762 8.666676720205485 >50 0.12492502185143654 5.008864697833697 >100 0.09138810323276797 10.002652387761636 >500 0.003353691861752953 1.1793047068566824 >1k 0.0029344803790338336 3.493860988292341 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3539 0.8303496431303172 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2720 0.6381890447342364 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2443 0.5731969986344632 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2382 0.5588846707929968 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1478 0.3467806647489712 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1259 0.2953970615148543 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 1010 0.2369746085226393 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 794 0.18629489026433227 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 697 0.1635359427131481 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTC 634 0.14875435822114189 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 605 0.14195013678831364 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 590 0.13843071190926454 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATG 583 0.13678831363237495 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 561 0.13162649047643626 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 542 0.1271685522963074 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 490 0.11496787938227054 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 487 0.11426399440646073 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA 455 0.10675588799782265 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 452 0.10605200302201284 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 444 0.10417497641985331 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 444 0.10417497641985331 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 443 0.10394034809458337 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 443 0.10394034809458337 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACG 440 0.10323646311877356 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 436 0.10229794981769379 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 434 0.10182869316715391 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 433 0.10159406484188398 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 2.3462832526993988E-4 0.0 12 0.0 0.0 0.0 2.3462832526993988E-4 4.6925665053987976E-4 13 0.0 0.0 0.0 2.3462832526993988E-4 4.6925665053987976E-4 14 0.0 0.0 0.0 2.3462832526993988E-4 4.6925665053987976E-4 15 0.0 0.0 0.0 2.3462832526993988E-4 4.6925665053987976E-4 16 0.0 0.0 0.0 4.6925665053987976E-4 4.6925665053987976E-4 17 0.0 0.0 0.0 4.6925665053987976E-4 4.6925665053987976E-4 18 0.0 0.0 0.0 9.385133010797595E-4 4.6925665053987976E-4 19 0.0 0.0 0.0 0.0014077699516196393 4.6925665053987976E-4 20 0.0 0.0 0.0 0.002111654927429459 4.6925665053987976E-4 21 0.0 0.0 0.0 0.003754053204319038 4.6925665053987976E-4 22 0.0 0.0 0.0 0.004927194830668738 4.6925665053987976E-4 23 0.0 0.0 0.0 0.007508106408638076 4.6925665053987976E-4 24 0.0 0.0 0.0 0.011496787938227055 4.6925665053987976E-4 25 0.0 0.0 0.0 0.014781584492006212 4.6925665053987976E-4 26 0.0 0.0 0.0 0.01783175272051543 4.6925665053987976E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAATCC 20 0.0037475887 32.00575 3 TACACTT 40 1.58932E-4 24.004313 5 ATATACC 35 0.0020622648 22.861252 3 GTATATA 35 0.0020636725 22.858568 1 TAGGACG 60 4.7017347E-6 21.337168 4 AGGGACG 120 3.6379788E-12 20.003595 8 GATGGAT 40 0.0044742757 20.003593 3 TAGGCAT 40 0.0044742757 20.003593 5 TACACGG 40 0.0044742757 20.003593 5 GCGAATG 80 1.2615601E-7 19.998901 14 CTTATAC 65 9.396403E-6 19.695847 3 CGAATGT 90 2.0305379E-8 19.55448 23 GACGGCC 115 4.5474735E-11 19.47719 11 TATACTG 50 7.1770954E-4 19.203451 5 CCTTTAG 60 1.13550595E-4 18.66783 1 GGCGTTA 60 1.13652844E-4 18.66564 31 TTAGGCA 45 0.008832247 17.780973 4 AGGGATC 45 0.008832247 17.780973 5 ATTCGTT 45 0.008844197 17.7768 32 GCATTCG 135 2.3646862E-11 17.7768 22 >>END_MODULE