##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063067_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1789463 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.0189649073493 32.0 32.0 32.0 32.0 32.0 2 30.709406117924765 32.0 32.0 32.0 32.0 32.0 3 30.80033339610822 32.0 32.0 32.0 32.0 32.0 4 30.8226305880591 32.0 32.0 32.0 32.0 32.0 5 30.81062083988325 32.0 32.0 32.0 32.0 32.0 6 34.41374758796354 36.0 36.0 36.0 32.0 36.0 7 34.2622144185155 36.0 36.0 36.0 32.0 36.0 8 34.23420322186041 36.0 36.0 36.0 32.0 36.0 9 34.294794583626484 36.0 36.0 36.0 32.0 36.0 10 34.11025374651501 36.0 36.0 36.0 32.0 36.0 11 34.402742051665776 36.0 36.0 36.0 32.0 36.0 12 34.227849919221576 36.0 36.0 36.0 32.0 36.0 13 34.30953531869617 36.0 36.0 36.0 32.0 36.0 14 34.21347912753714 36.0 36.0 36.0 32.0 36.0 15 34.201831499170424 36.0 36.0 36.0 32.0 36.0 16 34.19042584283665 36.0 36.0 36.0 32.0 36.0 17 34.107771437576524 36.0 36.0 36.0 32.0 36.0 18 34.14515192546591 36.0 36.0 36.0 32.0 36.0 19 34.11543798335031 36.0 36.0 36.0 32.0 36.0 20 34.04866990823504 36.0 36.0 36.0 32.0 36.0 21 34.00636783213735 36.0 36.0 36.0 32.0 36.0 22 34.008239343311374 36.0 36.0 36.0 32.0 36.0 23 33.995245501024606 36.0 36.0 36.0 32.0 36.0 24 33.98108650472236 36.0 36.0 36.0 32.0 36.0 25 33.95978849520778 36.0 36.0 36.0 32.0 36.0 26 33.91660459031564 36.0 36.0 36.0 32.0 36.0 27 33.9359623529517 36.0 36.0 36.0 32.0 36.0 28 33.92962413863824 36.0 36.0 36.0 32.0 36.0 29 33.89317297982691 36.0 36.0 36.0 32.0 36.0 30 33.848725008564024 36.0 36.0 36.0 32.0 36.0 31 33.860974493465356 36.0 36.0 36.0 32.0 36.0 32 33.80594513549595 36.0 36.0 36.0 32.0 36.0 33 33.71826240609613 36.0 36.0 36.0 27.0 36.0 34 33.696649777056024 36.0 36.0 36.0 27.0 36.0 35 33.63252160005543 36.0 36.0 36.0 27.0 36.0 36 33.586309971203654 36.0 36.0 36.0 27.0 36.0 37 33.582584831315316 36.0 36.0 36.0 27.0 36.0 38 32.90838592359831 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 2.0 9 8.0 10 11.0 11 20.0 12 9.0 13 10.0 14 780.0 15 1337.0 16 1515.0 17 1858.0 18 2330.0 19 2789.0 20 3381.0 21 4261.0 22 5777.0 23 7711.0 24 10234.0 25 13975.0 26 19242.0 27 26539.0 28 36418.0 29 48479.0 30 64225.0 31 85852.0 32 116411.0 33 173009.0 34 377824.0 35 785453.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.139165076682914 17.818467684629287 12.060059421562977 23.982307817124823 2 15.935003900101485 21.203300128885076 38.20673613227355 24.65495983873989 3 18.104593537670652 27.39031461001961 28.49430844871344 26.010783403596292 4 11.998428524405654 15.964504322955001 36.268393725051006 35.76867342758834 5 13.802599666938631 37.79385960010283 32.39116828540454 16.01237244755401 6 31.653436381468104 36.490439826651134 17.849512840501717 14.00661095137905 7 28.500449576213647 31.99658221488793 21.70707078045201 17.795897428446413 8 28.536054751743407 31.130805455727124 20.295575366633155 20.037564425896317 9 28.688910273390043 14.108070711913886 19.489197287670347 37.713821727025724 10 16.680451132021275 26.429011307359673 30.379937120484797 26.51060044013425 11 35.93271846548298 22.572531233304797 22.740237706182285 18.754512595029944 12 25.83761683940401 24.734579098725735 28.290643570940784 21.137160490929475 13 29.10981432597944 20.260774162466024 26.190147500769896 24.43926401078464 14 24.610291914996356 20.39196596635086 26.244852701186172 28.752889417466616 15 24.7176283633205 26.739994511031878 24.769667358470425 23.7727097671772 16 24.575564995827886 26.523520045426572 24.751615331692804 24.149299627052734 17 22.667580349192917 25.955440090727333 26.264087413930042 25.112892146149708 18 23.98073493603554 24.463591029830337 28.44866272893051 23.107011305203613 19 24.75187542998106 24.86761752908782 27.929613602463053 22.45089343846807 20 25.55612311048916 23.412218501446333 27.141836821374444 23.889821566690063 21 27.44600981472074 23.50944726948791 26.033208651395224 23.011334264396126 22 25.506878820208424 23.893149011391397 26.666808246424782 23.933163921975396 23 23.19071988929681 23.942806332571205 27.777513861651194 25.08895991648079 24 23.675591628502797 25.695417093762963 27.202615226574352 23.426376051159895 25 24.014429069186424 24.580726439022428 27.310881159154597 24.093963332636548 26 23.389459152048335 25.544299340183947 28.063281977044774 23.002959530722947 27 24.217852304583236 25.35471892981852 26.75040127334427 23.67702749225397 28 22.894769932350304 25.207601579331218 28.071913779469256 23.82571470884923 29 22.881158901904676 25.4287199320397 28.047482786372175 23.642638379683447 30 23.13398095798003 25.65425159451909 27.994854172685873 23.21691327481501 31 23.553465674656287 25.755646003633696 26.468972477915326 24.22191584379469 32 23.010946549296914 25.96640867452696 26.426189452929616 24.59645532324651 33 22.83670249598031 25.289370189854566 27.134990613736974 24.73893670042815 34 23.702439357001456 25.59888489092029 27.316874967164868 23.381800784913388 35 24.720583196817746 25.42856392310861 27.033830713966733 22.81702216610691 36 23.171378541171684 26.592454852803176 26.45429277728687 23.78187382873827 37 24.263312792643354 26.561425903177454 26.400300900802215 22.774960403376973 38 23.04306470379813 26.441721425721237 26.929215795197596 23.585998075283037 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3435.0 1 2430.0 2 1425.0 3 1425.0 4 3396.0 5 5367.0 6 5367.0 7 6105.0 8 6843.0 9 6359.0 10 5875.0 11 5875.0 12 7459.0 13 9043.0 14 10622.0 15 12201.0 16 12201.0 17 17548.5 18 22896.0 19 22896.0 20 25937.0 21 28978.0 22 25508.0 23 22038.0 24 22038.0 25 21857.0 26 21676.0 27 21676.0 28 28125.5 29 34575.0 30 41018.0 31 47461.0 32 47461.0 33 56145.5 34 64830.0 35 64830.0 36 69586.5 37 74343.0 38 84653.0 39 94963.0 40 94963.0 41 101008.0 42 107053.0 43 122665.5 44 138278.0 45 138278.0 46 142396.5 47 146515.0 48 146515.0 49 152883.0 50 159251.0 51 156158.5 52 153066.0 53 153066.0 54 143527.5 55 133989.0 56 133989.0 57 131165.5 58 128342.0 59 114977.5 60 101613.0 61 101613.0 62 98942.5 63 96272.0 64 78710.0 65 61148.0 66 61148.0 67 51578.0 68 42008.0 69 42008.0 70 33684.0 71 25360.0 72 19711.0 73 14062.0 74 14062.0 75 10452.5 76 6843.0 77 6843.0 78 6876.5 79 6910.0 80 5365.5 81 3821.0 82 3821.0 83 4089.0 84 4357.0 85 4357.0 86 2879.0 87 1401.0 88 1234.5 89 1068.0 90 1068.0 91 766.0 92 464.0 93 414.0 94 364.0 95 364.0 96 337.5 97 311.0 98 311.0 99 664.5 100 1018.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12478603916370441 2 0.05856505555018461 3 0.012964783289735524 4 0.0034647265688086313 5 1.676480597810628E-4 6 4.470614927495008E-4 7 0.0 8 2.235307463747504E-4 9 2.79413432968438E-4 10 5.029441793431885E-4 11 0.0015088325380295652 12 0.0022911901503411916 13 0.014082437021609277 14 0.00977947015389533 15 0.023470728369348794 16 0.011288302691924896 17 0.020453063293289664 18 0.006147095525305637 19 0.007823576123116264 20 0.006202978211899324 21 0.006147095525305637 22 0.007264749257179388 23 0.009723587467301642 24 0.013914788961828215 25 0.01659715791832522 26 0.018329521202729532 27 0.008885347168396328 28 0.005476503286181385 29 0.010226531646644832 30 0.0029058997028717556 31 0.0055882686593687605 32 0.007376514630366764 33 0.00815887224267839 34 0.012350073737204962 35 0.016205979112169405 36 0.014529498514358776 37 0.009444174034333204 38 0.006091212838711948 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1789463.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.130845698167 #Duplication Level Percentage of deduplicated Percentage of total 1 69.79967053157966 25.91720796290978 2 14.849536621376489 11.027517059552208 3 6.116425488401704 6.813241531025382 4 3.015630812074588 4.478916894631182 5 1.7109247586195677 3.176404160673839 6 1.0174065136272457 2.2666298561881977 7 0.6989958033554317 1.8168013722639769 8 0.475383838972146 1.4121123177821615 9 0.3479295296237494 1.1627025910465736 >10 1.650866316975096 10.842267908764628 >50 0.13378130622699716 3.4965272898389084 >100 0.14748130315799815 11.917760212147304 >500 0.023777463637995502 6.043910008805374 >1k 0.011437260990428216 7.007922651618102 >5k 4.5147082856953485E-4 0.943449423907379 >10k+ 3.009805523796899E-4 1.6766287588451143 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 18188 1.0163943037659902 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 11817 0.6603657074776065 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 6445 0.3601639150963166 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5385 0.3009282673070077 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 5054 0.2824310980444971 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2942 0.16440686395862894 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2922 0.1632892102267552 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA 2770 0.15479504186451465 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2661 0.14870382902580273 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2568 0.14350673917258977 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2485 0.13886847618531367 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2450 0.1369125821545346 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2447 0.13674493409475355 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2438 0.13624198991541037 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2365 0.13216255379407119 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2301 0.12858606185207516 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAA 2269 0.12679781588107716 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 2209 0.12344485468545592 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAA 2202 0.1230536758793001 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2178 0.12171249140105159 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2177 0.12165660871445792 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 2122 0.1185830609518051 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 2114 0.11813599945905559 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2102 0.11746540721993134 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2091 0.11685069766740079 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2057 0.1149506863232154 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2032 0.11355361915837321 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1993 0.11137419438121939 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1955 0.10925065229065926 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1932 0.10796535049900444 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 1929 0.10779770243922338 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1916 0.10707122751350544 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1891 0.10567416034866325 No Hit CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCC 1854 0.10360650094469682 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.58826865936876E-5 2 0.0 0.0 0.0 0.0 5.58826865936876E-5 3 0.0 0.0 0.0 0.0 5.58826865936876E-5 4 0.0 0.0 0.0 0.0 5.58826865936876E-5 5 0.0 0.0 0.0 0.0 5.58826865936876E-5 6 0.0 0.0 0.0 0.0 1.117653731873752E-4 7 0.0 0.0 0.0 0.0 1.117653731873752E-4 8 0.0 0.0 0.0 0.0 1.117653731873752E-4 9 0.0 0.0 0.0 5.58826865936876E-5 1.117653731873752E-4 10 0.0 0.0 0.0 5.58826865936876E-5 1.117653731873752E-4 11 0.0 0.0 0.0 1.117653731873752E-4 1.117653731873752E-4 12 0.0 0.0 0.0 1.117653731873752E-4 3.352961195621256E-4 13 0.0 0.0 0.0 1.676480597810628E-4 3.352961195621256E-4 14 0.0 0.0 0.0 2.235307463747504E-4 3.352961195621256E-4 15 0.0 0.0 0.0 2.79413432968438E-4 6.147095525305637E-4 16 0.0 0.0 0.0 2.79413432968438E-4 6.705922391242512E-4 17 0.0 0.0 0.0 2.79413432968438E-4 6.705922391242512E-4 18 0.0 0.0 0.0 4.470614927495008E-4 6.705922391242512E-4 19 0.0 0.0 0.0 5.58826865936876E-4 6.705922391242512E-4 20 0.0 0.0 0.0 5.58826865936876E-4 9.500056720926893E-4 21 0.0 0.0 0.0 6.705922391242512E-4 9.500056720926893E-4 22 0.0 0.0 0.0 0.0014529498514358778 0.0010617710452800644 23 0.0 0.0 0.0 0.003185313135840193 0.0010617710452800644 24 0.0 0.0 0.0 0.00653827433146145 0.001117653731873752 25 0.0 0.0 0.0 0.008214754929272077 0.001117653731873752 26 0.0 0.0 0.0 0.010561827766206957 0.001117653731873752 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 50 7.212138E-4 19.194433 4 CGTAAAC 190 0.0 16.8424 32 GTATTAG 465 0.0 16.53028 1 CATCGTT 470 0.0 16.33934 28 CCCACGA 70 3.6941952E-4 16.00207 2 GGTTCCG 260 0.0 15.997597 8 ATCGTTT 495 0.0 15.515423 29 GTGTTAC 95 1.4217096E-5 15.170881 1 TATTAGC 430 0.0 14.885645 2 AACGAAT 140 1.27947715E-8 14.857403 31 TAATACT 240 0.0 14.662415 4 TAGGACG 145 2.0396328E-8 14.340669 4 TTAGGCA 190 1.8189894E-11 14.311639 4 ATTAGCT 425 0.0 14.302533 3 GATATAC 225 0.0 14.234407 1 CGGTGTT 135 1.3182398E-7 14.223663 14 GTCGTAA 205 3.6379788E-12 14.0490265 30 TACCGTC 410 0.0 14.04667 7 TCTAGCG 505 0.0 13.93967 28 TATACAC 345 0.0 13.909787 3 >>END_MODULE