##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063063_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 775801 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22025880348182 32.0 32.0 32.0 32.0 32.0 2 30.851665568876555 32.0 32.0 32.0 32.0 32.0 3 30.911791812591115 32.0 32.0 32.0 32.0 32.0 4 30.97756641200514 32.0 32.0 32.0 32.0 32.0 5 30.893754970669026 32.0 32.0 32.0 32.0 32.0 6 34.5572859534855 36.0 36.0 36.0 32.0 36.0 7 34.479229854047624 36.0 36.0 36.0 32.0 36.0 8 34.45973387505301 36.0 36.0 36.0 32.0 36.0 9 34.583199815416584 36.0 36.0 36.0 32.0 36.0 10 34.33247701407964 36.0 36.0 36.0 32.0 36.0 11 34.59455066441007 36.0 36.0 36.0 32.0 36.0 12 34.4093498203792 36.0 36.0 36.0 32.0 36.0 13 34.4979859525832 36.0 36.0 36.0 32.0 36.0 14 34.410362966791745 36.0 36.0 36.0 32.0 36.0 15 34.35482681770196 36.0 36.0 36.0 32.0 36.0 16 34.35837411913622 36.0 36.0 36.0 32.0 36.0 17 34.29628732110425 36.0 36.0 36.0 32.0 36.0 18 34.321470325508734 36.0 36.0 36.0 32.0 36.0 19 34.30872221097936 36.0 36.0 36.0 32.0 36.0 20 34.28429197693738 36.0 36.0 36.0 32.0 36.0 21 34.25656708356911 36.0 36.0 36.0 32.0 36.0 22 34.24727346316904 36.0 36.0 36.0 32.0 36.0 23 34.17992758452232 36.0 36.0 36.0 32.0 36.0 24 34.16493791577995 36.0 36.0 36.0 32.0 36.0 25 34.142245240725394 36.0 36.0 36.0 32.0 36.0 26 34.10242961790459 36.0 36.0 36.0 32.0 36.0 27 34.09333321302757 36.0 36.0 36.0 32.0 36.0 28 34.07574622873649 36.0 36.0 36.0 32.0 36.0 29 34.049355440377106 36.0 36.0 36.0 32.0 36.0 30 34.02862331963996 36.0 36.0 36.0 32.0 36.0 31 34.03480145037194 36.0 36.0 36.0 32.0 36.0 32 33.976658962801025 36.0 36.0 36.0 32.0 36.0 33 33.94428983721341 36.0 36.0 36.0 32.0 36.0 34 33.927262274732826 36.0 36.0 36.0 32.0 36.0 35 33.8809282277285 36.0 36.0 36.0 32.0 36.0 36 33.84640391028112 36.0 36.0 36.0 32.0 36.0 37 33.83340830960517 36.0 36.0 36.0 32.0 36.0 38 33.2235998664606 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 0.0 9 5.0 10 2.0 11 14.0 12 4.0 13 3.0 14 179.0 15 327.0 16 407.0 17 398.0 18 492.0 19 661.0 20 844.0 21 1076.0 22 1643.0 23 2407.0 24 3428.0 25 5130.0 26 7333.0 27 10741.0 28 14817.0 29 19766.0 30 26456.0 31 35994.0 32 48798.0 33 73359.0 34 163441.0 35 358073.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.538677954727305 17.333711896342567 11.581446971065741 25.54616317786439 2 16.194541890218737 20.26452228642179 38.05857924061081 25.48235658274866 3 18.299375414939764 25.142868192570727 29.08001005523936 27.477746337250146 4 12.395217685540267 15.932712448841482 36.567819277496696 35.10425058812155 5 14.10429763379432 37.16877696413633 33.864312792359875 14.862612609709474 6 32.915571023459655 36.16731116267079 17.5041247744264 13.412993039443155 7 29.053622067543184 31.07837071410157 21.822248002062388 18.045759216292858 8 27.862830096017387 33.100798275837626 20.0183810971169 19.017990531028094 9 28.060783863840843 13.98456814789417 18.743796709968315 39.21085127829667 10 15.608722384850676 27.23470186144056 32.233561099101955 24.923014654606813 11 36.681825564398245 21.553864358801828 22.428336826582726 19.3359732502172 12 24.08762323144825 24.501531369879963 29.31129604421895 22.099549354452833 13 29.752022432075286 19.948947690720985 25.20308118735295 25.09594868985078 14 23.690021773348338 19.84713536731729 25.914022990283854 30.54881986905052 15 25.06182358295706 26.889197183062276 23.443837884253877 24.60514134972679 16 25.142515334417936 25.888416487689923 24.35768190525792 24.61138627263422 17 23.60021660091282 25.983729145715685 25.932415358036152 24.483638895335343 18 24.566356258185607 24.983499881405397 26.90357227567573 23.546571584733265 19 25.169677789451296 25.560919643950577 26.17130850097005 23.098094065628082 20 25.496939727849764 24.15629817930565 26.093654124793105 24.25310796805148 21 26.555978085723492 24.612826297131807 24.964099258781825 23.867096358362875 22 25.366937116014775 24.732966718487752 25.45614157211252 24.443954593384948 23 24.017810642039098 24.572008312320488 25.843349885782942 25.566831159857472 24 24.19638460090604 25.612170966968424 25.847447794328087 24.34399663779745 25 24.661253600187713 24.65222895775694 25.831105106142687 24.855412335912664 26 24.205977265196825 25.411821736658418 26.23926852569301 24.142932472451747 27 25.03351690283192 25.35592372584205 25.311191551677908 24.299367819648126 28 24.103930523919466 24.836770656488117 26.257977773738673 24.80132104585375 29 24.06771663897136 25.57950658950655 26.211191654537885 24.141585116984206 30 24.318387771649107 25.388420036325154 26.371055375877678 23.922136816148065 31 24.351816640777574 25.40061489278049 25.34569994005762 24.901868526384312 32 24.130836639827987 25.574865999953595 25.33677260340369 24.95752475681473 33 23.81350775783389 24.997937431999713 25.861508871620607 25.32704593854579 34 24.378915017294077 25.309559506973713 26.11580007193512 24.19572540379709 35 25.26809219432075 25.06052862959057 25.886528480041665 23.78485069604701 36 24.181777161826794 25.725078157733588 25.558384632739227 24.53476004770039 37 24.994488983768605 25.678241734442498 25.54623517020983 23.781034111579064 38 24.074704286937063 25.69674328909239 25.70976291392094 24.518789510049604 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 430.0 1 343.5 2 257.0 3 257.0 4 622.5 5 988.0 6 988.0 7 1155.5 8 1323.0 9 1179.0 10 1035.0 11 1035.0 12 1407.5 13 1780.0 14 2184.0 15 2588.0 16 2588.0 17 3789.5 18 4991.0 19 4991.0 20 5864.5 21 6738.0 22 7179.5 23 7621.0 24 7621.0 25 8404.0 26 9187.0 27 9187.0 28 11537.0 29 13887.0 30 16480.0 31 19073.0 32 19073.0 33 23366.0 34 27659.0 35 27659.0 36 30574.5 37 33490.0 38 37849.0 39 42208.0 40 42208.0 41 45972.5 42 49737.0 43 55853.0 44 61969.0 45 61969.0 46 65640.0 47 69311.0 48 69311.0 49 71284.0 50 73257.0 51 72400.0 52 71543.0 53 71543.0 54 67822.0 55 64101.0 56 64101.0 57 61709.0 58 59317.0 59 52779.0 60 46241.0 61 46241.0 62 43280.5 63 40320.0 64 32869.5 65 25419.0 66 25419.0 67 21059.0 68 16699.0 69 16699.0 70 13262.0 71 9825.0 72 7638.5 73 5452.0 74 5452.0 75 4069.5 76 2687.0 77 2687.0 78 2554.0 79 2421.0 80 1880.5 81 1340.0 82 1340.0 83 1362.5 84 1385.0 85 1385.0 86 914.5 87 444.0 88 390.5 89 337.0 90 337.0 91 254.5 92 172.0 93 155.5 94 139.0 95 139.0 96 119.0 97 99.0 98 99.0 99 215.0 100 331.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1212939916292967 2 0.05684447429173203 3 0.011085316982061121 4 0.003351374901553362 5 2.5779806935025866E-4 6 1.2889903467512933E-4 7 1.2889903467512933E-4 8 5.155961387005173E-4 9 3.86697104025388E-4 10 5.155961387005173E-4 11 0.002449081658827457 12 0.0032224758668782326 13 0.016241278369066296 14 0.010569720843360605 15 0.02668210017775177 16 0.012245408294137285 17 0.023330725276198408 18 0.006316052699081337 19 0.008507336288558535 20 0.0068316488377818535 21 0.006573850768431594 22 0.007089446907132112 23 0.010956417947385992 24 0.01533898512634039 25 0.01894815809724401 26 0.02088164361737095 27 0.00940962953128444 28 0.006702749803106724 29 0.012632105398162674 30 0.0038669710402538795 31 0.007218345941807242 32 0.007089446907132112 33 0.008894033392583923 34 0.013147701536863189 35 0.01740136968114246 36 0.016241278369066296 37 0.010569720843360605 38 0.006316052699081337 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 775801.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.55772031433677 #Duplication Level Percentage of deduplicated Percentage of total 1 82.16903665300951 50.58138576784445 2 11.4108553571337 14.048524852435756 3 2.985430179244557 5.513288279757502 4 1.226744227143208 3.0206231212683528 5 0.5781225963960902 1.779395454817436 6 0.35140043103792346 1.2978845671301926 7 0.23096914401441482 0.995255377793678 8 0.15727069615109399 0.7744980421848067 9 0.1171530745840233 0.6490508579287148 >10 0.6273998503863484 7.314187042843794 >50 0.07438542031417518 3.2136946297458677 >100 0.06471849599098607 7.548370093198106 >500 0.00546324965945597 2.1097977031577773 >1k 0.0010506249345107633 1.1540442098935497 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2879 0.3711003208296973 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2074 0.26733659791621817 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1473 0.18986827807646547 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1280 0.16499076438416552 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1216 0.15674122616495725 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 844 0.10879078526580914 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 812 0.10466601615620501 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.577980693502586E-4 2 0.0 0.0 0.0 0.0 2.577980693502586E-4 3 0.0 0.0 0.0 0.0 2.577980693502586E-4 4 0.0 0.0 0.0 0.0 2.577980693502586E-4 5 0.0 0.0 0.0 0.0 2.577980693502586E-4 6 0.0 0.0 0.0 0.0 6.444951733756466E-4 7 0.0 0.0 0.0 0.0 7.733942080507759E-4 8 0.0 0.0 0.0 1.288990346751293E-4 7.733942080507759E-4 9 0.0 0.0 0.0 1.288990346751293E-4 7.733942080507759E-4 10 0.0 0.0 0.0 2.577980693502586E-4 7.733942080507759E-4 11 0.0 0.0 0.0 2.577980693502586E-4 7.733942080507759E-4 12 0.0 0.0 0.0 2.577980693502586E-4 0.0010311922774010344 13 0.0 0.0 0.0 2.577980693502586E-4 0.0014178893814264224 14 0.0 0.0 0.0 2.577980693502586E-4 0.0015467884161015518 15 0.0 0.0 0.0 2.577980693502586E-4 0.0015467884161015518 16 0.0 0.0 0.0 2.577980693502586E-4 0.0015467884161015518 17 0.0 0.0 0.0 2.577980693502586E-4 0.0015467884161015518 18 0.0 0.0 0.0 3.8669710402538794E-4 0.0015467884161015518 19 0.0 0.0 0.0 3.8669710402538794E-4 0.0015467884161015518 20 0.0 0.0 0.0 3.8669710402538794E-4 0.002062384554802069 21 0.0 0.0 0.0 5.155961387005172E-4 0.002062384554802069 22 0.0 0.0 0.0 7.733942080507759E-4 0.002062384554802069 23 0.0 0.0 0.0 0.0015467884161015518 0.0021912835894771984 24 0.0 0.0 0.0 0.0029646777975279744 0.0021912835894771984 25 0.0 0.0 0.0 0.0037380720055787504 0.0021912835894771984 26 0.0 0.0 0.0 0.004640365248304655 0.0021912835894771984 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCTATT 35 0.0020662774 22.856499 11 GTCTAAA 40 0.004457888 20.018795 1 ACCGTCG 100 3.261448E-9 19.198221 8 CTTATAC 55 0.0013649513 17.452929 3 GTATAGG 80 5.572128E-5 16.015036 1 GATATAT 60 0.0024256904 16.015034 1 GTATAAC 100 1.3002191E-6 16.015034 1 GCGTCCA 60 0.0024414049 15.999549 9 GTCGTAG 130 4.793037E-9 15.999548 11 TACCGTC 120 3.1088348E-8 15.998517 7 TAATACT 120 3.1111995E-8 15.997486 4 ATACCGT 140 7.4396667E-10 15.996455 6 GGCATCG 155 1.891749E-10 15.483435 26 CGTTTAT 135 7.898052E-9 15.406973 31 GTTATTC 95 1.4324538E-5 15.15649 3 GTACATA 85 9.350708E-5 15.072973 1 TCTTTCG 170 4.7293724E-11 15.058399 10 TCATAGG 75 6.2455E-4 14.93195 3 CTTACAC 75 6.2455E-4 14.93195 3 GTATTAC 65 0.0041340645 14.783108 1 >>END_MODULE