##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063061_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1727094 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24760146234079 32.0 32.0 32.0 32.0 32.0 2 30.88214596310334 32.0 32.0 32.0 32.0 32.0 3 30.92577647771343 32.0 32.0 32.0 32.0 32.0 4 30.98634295527632 32.0 32.0 32.0 32.0 32.0 5 30.91111311833635 32.0 32.0 32.0 32.0 32.0 6 34.5539837437916 36.0 36.0 36.0 32.0 36.0 7 34.49037689899913 36.0 36.0 36.0 32.0 36.0 8 34.474008363181156 36.0 36.0 36.0 32.0 36.0 9 34.60384553475375 36.0 36.0 36.0 32.0 36.0 10 34.33550287361313 36.0 36.0 36.0 32.0 36.0 11 34.586705182230965 36.0 36.0 36.0 32.0 36.0 12 34.41714521618395 36.0 36.0 36.0 32.0 36.0 13 34.49366044928649 36.0 36.0 36.0 32.0 36.0 14 34.39663040923077 36.0 36.0 36.0 32.0 36.0 15 34.34975455881382 36.0 36.0 36.0 32.0 36.0 16 34.36622847395683 36.0 36.0 36.0 32.0 36.0 17 34.29472860191744 36.0 36.0 36.0 32.0 36.0 18 34.31445827499835 36.0 36.0 36.0 32.0 36.0 19 34.310783315789415 36.0 36.0 36.0 32.0 36.0 20 34.292917467144235 36.0 36.0 36.0 32.0 36.0 21 34.280286423321485 36.0 36.0 36.0 32.0 36.0 22 34.250399225519864 36.0 36.0 36.0 32.0 36.0 23 34.19986752313424 36.0 36.0 36.0 32.0 36.0 24 34.186182686061095 36.0 36.0 36.0 32.0 36.0 25 34.163262682864975 36.0 36.0 36.0 32.0 36.0 26 34.11559417148111 36.0 36.0 36.0 32.0 36.0 27 34.12729648762603 36.0 36.0 36.0 32.0 36.0 28 34.1126377603072 36.0 36.0 36.0 32.0 36.0 29 34.07825804501666 36.0 36.0 36.0 32.0 36.0 30 34.04698644080751 36.0 36.0 36.0 32.0 36.0 31 34.062293077273154 36.0 36.0 36.0 32.0 36.0 32 34.02847847308832 36.0 36.0 36.0 32.0 36.0 33 33.98345428795422 36.0 36.0 36.0 32.0 36.0 34 33.99977650318975 36.0 36.0 36.0 32.0 36.0 35 33.95954707734495 36.0 36.0 36.0 32.0 36.0 36 33.91390914449358 36.0 36.0 36.0 32.0 36.0 37 33.91143099333331 36.0 36.0 36.0 32.0 36.0 38 33.333099993399316 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 8.0 10 11.0 11 17.0 12 10.0 13 5.0 14 121.0 15 352.0 16 497.0 17 595.0 18 748.0 19 970.0 20 1386.0 21 2040.0 22 3133.0 23 4697.0 24 7127.0 25 11046.0 26 16246.0 27 23456.0 28 33039.0 29 45072.0 30 60814.0 31 81542.0 32 111421.0 33 166372.0 34 368682.0 35 787678.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.23811456165471 17.31056631555759 11.482252276798395 25.969066845989296 2 16.906481280324424 19.380230284597 37.220189731334635 26.493098703743932 3 18.872461022100023 23.166921075977662 28.69007386749251 29.2705440344298 4 12.716029009423721 15.03741984047712 35.98048667506261 36.26606447503655 5 14.728126501803612 36.296023947796584 33.67056725474642 15.305282295653383 6 34.59939725028009 35.38279818306568 16.53242312914535 13.485381437508867 7 30.56156758115077 30.39319226399953 20.673165444382295 18.37207471046741 8 28.35937907115437 32.72516197766185 19.346299266396077 19.569159684787707 9 27.316816147392437 14.096428095814348 18.7391508259558 39.84760493083742 10 15.990701094618966 26.318913081869162 31.45230257920137 26.238083244310502 11 37.752481095040125 21.140435190439245 21.967852882934004 19.139230831586627 12 24.541731951551956 23.71841861768592 28.525412756811342 23.214436673950782 13 29.40388568781307 19.161363175724585 25.27735472102383 26.157396415438516 14 23.5292039846225 19.631382463422277 25.04662874600666 31.79278480594856 15 25.262797610946603 26.947852822913415 22.352521472929137 25.436828093210845 16 25.880799687305473 25.82439885924403 23.571492682079416 24.723308771371077 17 24.18733592817527 25.891279558988835 25.169986083755752 24.751398429080144 18 25.212363216085294 24.535696128648972 26.050756401006602 24.201184254259132 19 25.438166775527975 24.96948409003525 25.619351371884136 23.972997762552637 20 25.725125245221225 24.134979953816185 25.15639729197018 24.98349750899241 21 26.914355596886587 24.14020329153006 24.589832644075376 24.355608467507984 22 25.725807105376227 24.11165425767846 25.195515392820045 24.967023244125272 23 24.282719723904712 23.933373481418 25.775881038136824 26.00802575654047 24 24.62046808550065 24.97562054684098 25.327877586190922 25.076033781467444 25 24.882124776902824 24.371071549768185 25.401169544586427 25.34563412874256 26 24.660683665154988 25.17371919195312 25.791284476722875 24.374312666169015 27 25.38821489765441 24.58511948570393 24.96023319820052 25.066432418441142 28 24.41848547683004 24.587796518700937 25.90592119624852 25.087796808220503 29 24.411649743326937 24.926269829550556 25.836279355262736 24.82580107185977 30 24.50781651244406 25.031079025551676 25.933832798027158 24.527271663977107 31 25.02006390338753 24.84299199412617 24.830079294399134 25.30686480808717 32 24.756960830580464 24.760840424207505 24.819497563673107 25.662701181538928 33 24.451852482377923 24.372058764772405 25.42611177026821 25.749976982581458 34 25.11128444866786 24.652248765259447 25.590993241572523 24.64547354450017 35 25.81720788151666 24.440519450436497 25.492739565387346 24.249533102659505 36 24.561296834527123 25.159379703286504 25.1547469932264 25.124576468959976 37 25.587879510830508 24.825658525230075 25.019471002538037 24.56699096140138 38 24.559333173131208 24.613242153232367 25.67439786680255 25.15302680683387 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 93.5 2 145.0 3 145.0 4 460.5 5 776.0 6 776.0 7 992.0 8 1208.0 9 1216.0 10 1224.0 11 1224.0 12 1687.0 13 2150.0 14 2998.0 15 3846.0 16 3846.0 17 5731.5 18 7617.0 19 7617.0 20 9407.0 21 11197.0 22 12370.5 23 13544.0 24 13544.0 25 15694.5 26 17845.0 27 17845.0 28 22411.0 29 26977.0 30 32621.0 31 38265.0 32 38265.0 33 47876.5 34 57488.0 35 57488.0 36 65060.0 37 72632.0 38 82839.5 39 93047.0 40 93047.0 41 100435.0 42 107823.0 43 121925.5 44 136028.0 45 136028.0 46 139926.0 47 143824.0 48 143824.0 49 151913.0 50 160002.0 51 162061.0 52 164120.0 53 164120.0 54 156558.0 55 148996.0 56 148996.0 57 143479.5 58 137963.0 59 123315.0 60 108667.0 61 108667.0 62 102719.0 63 96771.0 64 80555.5 65 64340.0 66 64340.0 67 53894.5 68 43449.0 69 43449.0 70 34817.0 71 26185.0 72 20543.0 73 14901.0 74 14901.0 75 11366.0 76 7831.0 77 7831.0 78 7298.0 79 6765.0 80 5237.0 81 3709.0 82 3709.0 83 3784.0 84 3859.0 85 3859.0 86 2556.0 87 1253.0 88 1083.0 89 913.0 90 913.0 91 651.0 92 389.0 93 354.5 94 320.0 95 320.0 96 291.0 97 262.0 98 262.0 99 491.5 100 721.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12066511724318423 2 0.05610580547439803 3 0.012622358713538465 4 0.003995150235019055 5 2.3160291217501767E-4 6 5.211065523937898E-4 7 0.0 8 2.3160291217501767E-4 9 2.3160291217501767E-4 10 5.211065523937898E-4 11 0.0019686247534876503 12 0.0027792349461002123 13 0.014127777642676078 14 0.008974612846781936 15 0.02229178029684545 16 0.009785223039394497 17 0.01939674389465773 18 0.005790072804375442 19 0.007295491733513057 20 0.004747859699587863 21 0.006716484453075513 22 0.006948087365250532 23 0.008916712118738181 24 0.013317167450063519 25 0.015517395115726185 26 0.018122927877695136 27 0.008743009934606917 28 0.0055005691641566695 29 0.010943237600269586 30 0.0026055327619689487 31 0.006484881540900495 32 0.006311179356769232 33 0.008164002654169373 34 0.01233285507331969 35 0.01557529584376994 36 0.014069876914632323 37 0.009669421583306989 38 0.006311179356769232 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1727094.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.62283894584279 #Duplication Level Percentage of deduplicated Percentage of total 1 80.87410586331026 44.98447365323947 2 11.793490641310818 13.119748611018716 3 3.2676410207756073 5.452664106942928 4 1.3281509739200816 2.9550211087248384 5 0.6768253451539009 1.8823473583979944 6 0.40465360954921464 1.350478953168595 7 0.27187788315206796 1.0585833795252897 8 0.2034391387118597 0.9052689958280594 9 0.16473044634333261 0.8246497577788787 >10 0.8591283553772836 8.632464627598042 >50 0.07024618317158945 2.7419815688862164 >100 0.07097293484354907 8.5093637855252 >500 0.010243157654447377 3.7893259364977583 >1k 0.004494446725930992 3.7936281568681416 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4549 0.26339041187103884 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2960 0.17138615500951307 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2349 0.13600881017477914 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2134 0.12356015364537193 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1868 0.10815855998573326 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1848 0.10700054542485817 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1846 0.10688474396877065 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1825 0.10566882867985182 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1795 0.1039318068385392 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1765 0.10219478499722656 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1752 0.10144207553265776 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.7900728043754425E-5 2 0.0 0.0 0.0 0.0 5.7900728043754425E-5 3 0.0 0.0 0.0 0.0 5.7900728043754425E-5 4 0.0 0.0 0.0 0.0 5.7900728043754425E-5 5 0.0 5.7900728043754425E-5 0.0 0.0 5.7900728043754425E-5 6 0.0 5.7900728043754425E-5 0.0 0.0 5.7900728043754425E-5 7 0.0 5.7900728043754425E-5 0.0 0.0 5.7900728043754425E-5 8 0.0 5.7900728043754425E-5 0.0 0.0 5.7900728043754425E-5 9 0.0 5.7900728043754425E-5 0.0 5.7900728043754425E-5 5.7900728043754425E-5 10 0.0 5.7900728043754425E-5 0.0 5.7900728043754425E-5 1.1580145608750885E-4 11 0.0 5.7900728043754425E-5 0.0 5.7900728043754425E-5 1.1580145608750885E-4 12 0.0 5.7900728043754425E-5 0.0 5.7900728043754425E-5 2.316029121750177E-4 13 0.0 5.7900728043754425E-5 0.0 5.7900728043754425E-5 4.632058243500354E-4 14 0.0 5.7900728043754425E-5 0.0 1.1580145608750885E-4 4.632058243500354E-4 15 0.0 5.7900728043754425E-5 0.0 1.1580145608750885E-4 4.632058243500354E-4 16 0.0 5.7900728043754425E-5 0.0 1.1580145608750885E-4 4.632058243500354E-4 17 0.0 5.7900728043754425E-5 0.0 1.1580145608750885E-4 5.211065523937898E-4 18 0.0 5.7900728043754425E-5 0.0 1.1580145608750885E-4 5.790072804375443E-4 19 0.0 5.7900728043754425E-5 0.0 1.7370218413126327E-4 5.790072804375443E-4 20 0.0 1.1580145608750885E-4 0.0 3.4740436826252654E-4 8.106101926125619E-4 21 0.0 1.1580145608750885E-4 0.0 4.0530509630628094E-4 8.685109206563163E-4 22 0.0 1.1580145608750885E-4 0.0 6.369080084812986E-4 9.843123767438251E-4 23 0.0 1.1580145608750885E-4 0.0 0.001100113832831334 9.843123767438251E-4 24 0.0 1.1580145608750885E-4 0.0 0.0016212203852251238 0.001100113832831334 25 0.0 1.1580145608750885E-4 0.0 0.0019107240254438958 0.001100113832831334 26 0.0 1.1580145608750885E-4 0.0 0.002026525481531405 0.0012738160169625972 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCCG 40 0.0044900626 19.99562 4 TCTAGCG 460 0.0 19.477379 28 CTAGCGG 460 0.0 19.129568 29 TAGCGGC 490 0.0 17.958372 30 ACTCGTA 45 0.008849903 17.778519 13 GTCCTAT 475 0.0 17.193605 1 AACCGCG 185 0.0 16.430737 7 ACCGTCG 290 0.0 15.99835 8 TACCGTC 315 0.0 15.744408 7 GAACCGC 230 0.0 15.301439 6 ATACCGT 330 0.0 15.027447 6 GTATCAA 3105 0.0 15.007962 1 AGCGGCG 615 0.0 14.828597 31 CCGTCGT 305 0.0 14.6891365 9 AAGACGG 540 0.0 14.515339 5 TTATCCG 90 1.5358583E-4 14.221166 27 TAGGTTG 125 8.618081E-7 14.076917 5 CGCTTCG 425 0.0 13.9287815 32 CAAGACG 520 0.0 13.843122 4 CGTCGTA 325 0.0 13.78519 10 >>END_MODULE