##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063061_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1727094 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19301844601394 32.0 32.0 32.0 32.0 32.0 2 31.269697538176846 32.0 32.0 32.0 32.0 32.0 3 31.35785197563074 32.0 32.0 32.0 32.0 32.0 4 31.46012550561811 32.0 32.0 32.0 32.0 32.0 5 31.3810105298264 32.0 32.0 32.0 32.0 32.0 6 34.90684293964312 36.0 36.0 36.0 36.0 36.0 7 34.930901271152585 36.0 36.0 36.0 36.0 36.0 8 34.8588212338182 36.0 36.0 36.0 32.0 36.0 9 34.97471996312882 36.0 36.0 36.0 36.0 36.0 10 34.81382310401171 36.0 36.0 36.0 32.0 36.0 11 34.99027094066681 36.0 36.0 36.0 36.0 36.0 12 34.89288017907537 36.0 36.0 36.0 32.0 36.0 13 34.94639782200621 36.0 36.0 36.0 36.0 36.0 14 34.89478742905713 36.0 36.0 36.0 32.0 36.0 15 34.865457815266566 36.0 36.0 36.0 32.0 36.0 16 34.872540811328165 36.0 36.0 36.0 32.0 36.0 17 34.841169617866775 36.0 36.0 36.0 32.0 36.0 18 34.84176715338019 36.0 36.0 36.0 32.0 36.0 19 34.83265994786618 36.0 36.0 36.0 32.0 36.0 20 34.824682385556315 36.0 36.0 36.0 32.0 36.0 21 34.81891257800675 36.0 36.0 36.0 32.0 36.0 22 34.79783323895515 36.0 36.0 36.0 32.0 36.0 23 34.74065916504834 36.0 36.0 36.0 32.0 36.0 24 34.71425643306039 36.0 36.0 36.0 32.0 36.0 25 34.704499002370454 36.0 36.0 36.0 32.0 36.0 26 34.641376786671714 36.0 36.0 36.0 32.0 36.0 27 34.62563647375302 36.0 36.0 36.0 32.0 36.0 28 34.59591429302632 36.0 36.0 36.0 32.0 36.0 29 34.562060895353696 36.0 36.0 36.0 32.0 36.0 30 34.54534032310922 36.0 36.0 36.0 32.0 36.0 31 34.5398594401926 36.0 36.0 36.0 32.0 36.0 32 34.51211920138684 36.0 36.0 36.0 32.0 36.0 33 34.47533197382424 36.0 36.0 36.0 32.0 36.0 34 34.4694845792991 36.0 36.0 36.0 32.0 36.0 35 34.43657322647175 36.0 36.0 36.0 32.0 36.0 36 34.412975205750236 36.0 36.0 36.0 32.0 36.0 37 34.41073039452398 36.0 36.0 36.0 32.0 36.0 38 33.97486876799989 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 3.0 21 31.0 22 108.0 23 379.0 24 1036.0 25 2583.0 26 5675.0 27 11196.0 28 19961.0 29 31993.0 30 48962.0 31 71135.0 32 102493.0 33 163099.0 34 395973.0 35 872465.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.68546833443451 18.56324977315354 12.156827774461055 26.594454117950896 2 15.956282634297844 20.407980109941903 36.38979696530704 27.245940290453213 3 17.92855513365225 24.02330156899393 28.972250497077752 29.075892800276073 4 12.142961777926004 15.921222448614461 35.94749784464166 35.98831792881788 5 14.22111361628261 36.909166495859516 33.241097473559634 15.628622414298238 6 34.6334207443855 35.773894686376906 16.238016685880112 13.354667883357488 7 30.352067211515354 30.63143968015471 20.58746384804454 18.429029260285393 8 28.23346917221661 33.031430546725446 19.12734229429905 19.607757986758894 9 27.26275220985806 13.971699456988107 18.464952050741328 40.300596282412506 10 15.758435505117033 26.636191248208675 31.51669730613899 26.0886759405353 11 38.01523924008781 21.042867094115827 21.803960534780476 19.137933131015888 12 24.36165636126032 23.902443825933496 28.440258076171034 23.295641736635154 13 29.480768829917576 19.091571265456615 25.22517619211947 26.202483712506343 14 23.37035505884451 19.595748696944113 24.95405577229728 32.079840471914096 15 25.255371161036976 27.13998195813314 22.063246123256754 25.541400757573125 16 25.975744198919337 25.863358755642434 23.31977682717539 24.841120218262837 17 24.18368658567513 25.986715256957645 24.903682138899214 24.925916018468016 18 25.200133866483238 24.736870141405156 25.84671129654784 24.21628469556376 19 25.50324417779229 25.14292794717601 25.341064238541733 24.012763636489964 20 25.717303169370055 24.204588748498924 24.94664447910768 25.131463603023345 21 26.94162966325496 24.25028646401786 24.38924829178278 24.418835580944396 22 25.726219881488788 24.28547606557605 25.001186964924898 24.98711708801026 23 24.2570748981525 23.993105173320238 25.579007950937182 26.170811977590073 24 24.74404983168258 25.121852082168083 25.04814445536838 25.085953630780956 25 25.019830999354987 24.398845691085718 25.192143566013197 25.389179743546098 26 24.779803276258587 25.288982868312747 25.52417589798343 24.407037957445233 27 25.56878780193782 24.638554705186863 24.64312886270232 25.149528630172995 28 24.459873058443836 24.63282253311053 25.77091924353857 25.136385164907065 29 24.497740134584454 24.9561980992349 25.61470307927652 24.93135868690413 30 24.601845643607124 25.069509824016528 25.710412982732844 24.618231549643504 31 25.051213193954702 24.823663332742747 24.67370044710942 25.451423026193133 32 24.78701217189105 24.81080937111703 24.755629977291335 25.64654847970058 33 24.426695941274765 24.42663804054672 25.340022025436948 25.806643992741563 34 25.138295888932504 24.603408963264304 25.481589305503928 24.77670584229926 35 25.81393948447508 24.50972558528951 25.354497207447885 24.321837722787524 36 24.69680283759888 25.19665982280061 24.96656232955473 25.139975010045777 37 25.651527942312345 24.91763621435776 24.81121467621334 24.619621167116556 38 24.672556718138512 24.572793705955615 25.47384535748799 25.280804218417884 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 22.0 1 53.5 2 85.0 3 85.0 4 300.5 5 516.0 6 516.0 7 721.5 8 927.0 9 1029.5 10 1132.0 11 1132.0 12 1494.0 13 1856.0 14 2682.5 15 3509.0 16 3509.0 17 5286.5 18 7064.0 19 7064.0 20 8710.5 21 10357.0 22 11947.5 23 13538.0 24 13538.0 25 15943.5 26 18349.0 27 18349.0 28 22833.0 29 27317.0 30 32745.5 31 38174.0 32 38174.0 33 48462.0 34 58750.0 35 58750.0 36 65636.5 37 72523.0 38 82718.5 39 92914.0 40 92914.0 41 100504.0 42 108094.0 43 122227.5 44 136361.0 45 136361.0 46 140005.0 47 143649.0 48 143649.0 49 152428.5 50 161208.0 51 162385.0 52 163562.0 53 163562.0 54 156143.5 55 148725.0 56 148725.0 57 143667.0 58 138609.0 59 124313.5 60 110018.0 61 110018.0 62 103934.5 63 97851.0 64 81080.5 65 64310.0 66 64310.0 67 53972.0 68 43634.0 69 43634.0 70 35180.5 71 26727.0 72 20682.5 73 14638.0 74 14638.0 75 11040.5 76 7443.0 77 7443.0 78 7124.0 79 6805.0 80 5180.0 81 3555.0 82 3555.0 83 3413.0 84 3271.0 85 3271.0 86 2090.0 87 909.0 88 723.0 89 537.0 90 537.0 91 310.0 92 83.0 93 59.5 94 36.0 95 36.0 96 27.5 97 19.0 98 19.0 99 18.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008974612846781936 2 0.0 3 0.0 4 1.7370218413126327E-4 5 0.0 6 2.8950364021877213E-4 7 5.211065523937898E-4 8 0.0027792349461002123 9 0.003474043682625266 10 0.001100113832831334 11 0.0060795764445942145 12 4.0530509630628094E-4 13 1.1580145608750884E-4 14 0.0 15 0.0 16 1.1580145608750884E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 5.790072804375442E-5 22 0.0 23 1.1580145608750884E-4 24 0.0 25 0.0 26 1.1580145608750884E-4 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 5.790072804375442E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1727094.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.9325208015991 #Duplication Level Percentage of deduplicated Percentage of total 1 79.62765358775589 42.94520083504171 2 12.484412503339088 13.466316740641584 3 3.502241520253757 5.666541409299294 4 1.4406399969578236 3.1078938641417393 5 0.7403737129078402 1.9965110336179623 6 0.4518893816078209 1.4622920084151332 7 0.2956050901533277 1.1159909371627046 8 0.21131275581611603 0.9117303678956726 9 0.16763664181620613 0.8136960004676478 >10 0.9110668923350378 8.85778160042172 >50 0.07489018012273767 2.8279251969800234 >100 0.07706039849906414 9.022474929415388 >500 0.01046866544835012 3.9334681772942206 >1k 0.004748672986880466 3.8721768992053334 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3800 0.22002276656626682 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2597 0.15036819072963023 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2316 0.13409808614933524 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2276 0.13178205702758505 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2053 0.11887019467382784 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2000 0.11580145608750886 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1962 0.11360122842184617 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1904 0.11024298619530842 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1770 0.10248428863744533 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1735 0.10045776315591391 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7370218413126327E-4 2 0.0 0.0 0.0 0.0 1.7370218413126327E-4 3 0.0 0.0 0.0 0.0 1.7370218413126327E-4 4 0.0 0.0 0.0 0.0 1.7370218413126327E-4 5 0.0 0.0 0.0 0.0 2.316029121750177E-4 6 0.0 0.0 0.0 0.0 2.316029121750177E-4 7 0.0 0.0 0.0 0.0 2.316029121750177E-4 8 0.0 0.0 0.0 0.0 2.316029121750177E-4 9 0.0 0.0 0.0 0.0 2.316029121750177E-4 10 0.0 0.0 0.0 0.0 2.316029121750177E-4 11 0.0 0.0 0.0 0.0 2.316029121750177E-4 12 0.0 0.0 0.0 0.0 2.8950364021877213E-4 13 0.0 0.0 0.0 0.0 2.8950364021877213E-4 14 0.0 0.0 0.0 5.7900728043754425E-5 3.4740436826252654E-4 15 0.0 0.0 0.0 5.7900728043754425E-5 3.4740436826252654E-4 16 0.0 0.0 0.0 5.7900728043754425E-5 3.4740436826252654E-4 17 0.0 0.0 0.0 5.7900728043754425E-5 3.4740436826252654E-4 18 0.0 0.0 0.0 5.7900728043754425E-5 3.4740436826252654E-4 19 0.0 0.0 0.0 5.7900728043754425E-5 4.0530509630628094E-4 20 0.0 0.0 0.0 1.7370218413126327E-4 6.948087365250531E-4 21 0.0 0.0 0.0 2.316029121750177E-4 6.948087365250531E-4 22 0.0 0.0 0.0 4.632058243500354E-4 6.948087365250531E-4 23 0.0 0.0 0.0 9.264116487000708E-4 7.527094645688075E-4 24 0.0 0.0 0.0 0.0014475182010938606 7.527094645688075E-4 25 0.0 0.0 0.0 0.0016791211132688782 7.527094645688075E-4 26 0.0 0.0 0.0 0.0017949225693563871 9.264116487000708E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 350 0.0 19.19906 28 CTAGCGG 380 0.0 17.683348 29 TAGCGGC 400 0.0 16.79918 30 ACCGTCG 440 0.0 16.729845 8 AACCGCT 80 5.616089E-5 16.002462 7 CGCGTAA 210 0.0 16.000145 10 TACCGTC 485 0.0 15.837487 7 ATACCGT 495 0.0 15.517538 6 ATCGTTT 365 0.0 15.341717 29 CGCTTCG 405 0.0 15.011612 32 TCGCGTA 225 0.0 14.935198 9 GCGTAAC 225 0.0 14.933469 11 CGTTTAT 365 0.0 14.903382 31 GTCGCGT 230 0.0 14.610943 8 AAGACGG 605 0.0 14.547692 5 TCTAGAT 375 0.0 14.506379 2 GTATCAA 3170 0.0 14.386237 1 TTTTCGG 470 0.0 14.2971735 29 ATTGGAC 90 1.5336397E-4 14.223586 3 ATAACGA 180 1.1823431E-10 14.221527 12 >>END_MODULE