##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063048_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1569080 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.243048155607106 32.0 32.0 32.0 32.0 32.0 2 31.318798276697173 32.0 32.0 32.0 32.0 32.0 3 31.396401075789633 32.0 32.0 32.0 32.0 32.0 4 31.487778825808753 32.0 32.0 32.0 32.0 32.0 5 31.417176307135392 32.0 32.0 32.0 32.0 32.0 6 34.95526295663701 36.0 36.0 36.0 36.0 36.0 7 34.98789545466133 36.0 36.0 36.0 36.0 36.0 8 34.92099191883142 36.0 36.0 36.0 36.0 36.0 9 35.031002243352795 36.0 36.0 36.0 36.0 36.0 10 34.879825757768884 36.0 36.0 36.0 32.0 36.0 11 35.050246641343975 36.0 36.0 36.0 36.0 36.0 12 34.951728401356206 36.0 36.0 36.0 36.0 36.0 13 35.00388890305147 36.0 36.0 36.0 36.0 36.0 14 34.951305223443036 36.0 36.0 36.0 32.0 36.0 15 34.92310844571341 36.0 36.0 36.0 32.0 36.0 16 34.93459160782114 36.0 36.0 36.0 36.0 36.0 17 34.898680118285874 36.0 36.0 36.0 32.0 36.0 18 34.8981454100492 36.0 36.0 36.0 32.0 36.0 19 34.89720791801565 36.0 36.0 36.0 32.0 36.0 20 34.88369490402019 36.0 36.0 36.0 32.0 36.0 21 34.885195146200324 36.0 36.0 36.0 32.0 36.0 22 34.863673617661306 36.0 36.0 36.0 32.0 36.0 23 34.80664147143549 36.0 36.0 36.0 32.0 36.0 24 34.783698090600865 36.0 36.0 36.0 32.0 36.0 25 34.767770285772556 36.0 36.0 36.0 32.0 36.0 26 34.706419685420755 36.0 36.0 36.0 32.0 36.0 27 34.693717337548115 36.0 36.0 36.0 32.0 36.0 28 34.66596158258343 36.0 36.0 36.0 32.0 36.0 29 34.63114245290234 36.0 36.0 36.0 32.0 36.0 30 34.60803464450506 36.0 36.0 36.0 32.0 36.0 31 34.60996953628878 36.0 36.0 36.0 32.0 36.0 32 34.58770553445331 36.0 36.0 36.0 32.0 36.0 33 34.55479516659444 36.0 36.0 36.0 32.0 36.0 34 34.54901789583705 36.0 36.0 36.0 32.0 36.0 35 34.51596604379637 36.0 36.0 36.0 32.0 36.0 36 34.49956662502868 36.0 36.0 36.0 32.0 36.0 37 34.49931297320723 36.0 36.0 36.0 32.0 36.0 38 34.07165281566268 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 3.0 21 26.0 22 83.0 23 308.0 24 961.0 25 2404.0 26 4923.0 27 9527.0 28 17116.0 29 27258.0 30 41178.0 31 60076.0 32 86830.0 33 140963.0 34 351239.0 35 826183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.038541063811884 18.27794080529076 11.908352475964419 26.775165654932938 2 16.158768195375632 20.088204552986465 36.32370561093124 27.429321640706654 3 18.24954750554465 23.545580849924796 28.56419048104622 29.640681163484334 4 12.084939107513526 15.516255735059529 35.699012859152226 36.69979229827472 5 14.362756750934786 36.737538390355105 33.191445427540614 15.708259431169495 6 35.3402218753804 35.41746464008504 15.99568919092028 13.246624293614278 7 30.864446163788323 30.28531477801557 20.250988799763427 18.599250258432683 8 28.55959246651953 32.88635345358877 18.846065355511524 19.707988724380183 9 27.299878012871748 13.991936357645354 18.277546847773575 40.43063878170932 10 15.869776643055896 26.567150481371627 31.202670646974173 26.360402228598307 11 38.50570720014175 20.912463678701425 21.411130649599137 19.17069847155769 12 24.64689364555145 23.777336186821017 28.150425027755222 23.425345139872306 13 29.376914737881265 18.87476666248162 25.243789509642276 26.504529089994833 14 23.513984955505745 19.50571003754432 24.6535069298614 32.32679807708854 15 25.425153593188366 27.05783006602595 21.76536569199786 25.751650648787827 16 26.22997312436149 25.773335823116618 23.068309498756914 24.928381553764982 17 24.34318199199531 25.92831468121447 24.66254110689066 25.065962219899557 18 25.497680169271163 24.624365870446375 25.569250771152525 24.308703189129936 19 25.65471486476152 24.903765263721418 25.21101537206516 24.230504499451907 20 26.069862594641446 24.023886608713386 24.584214953985775 25.32203584265939 21 27.229748935362043 24.11180323731516 24.209248998456417 24.44919882886638 22 26.02955366144959 24.070250172394232 24.843825482225867 25.056370683930307 23 24.37359750528813 23.835638613479627 25.490940864035526 26.29982301719671 24 24.89873046626048 24.832385856680347 24.963609248731743 25.30527442832743 25 25.084651569487576 24.359895199668085 25.05769307982581 25.49776015101853 26 24.92423899625194 25.37870942125922 25.21511026532125 24.48194131716759 27 25.66902346473534 24.440212659918757 24.58800645984457 25.302757415501333 28 24.683126418028397 24.460448160705635 25.594679684910904 25.261745736355063 29 24.62258138527035 24.840416039972467 25.495768220868282 25.041234353888903 30 24.65336375455681 24.91644785479389 25.699709383842762 24.730479006806537 31 25.209294618502565 24.807211869375685 24.515703469549035 25.46779004257272 32 25.091837254951948 24.570066535804422 24.412075866112627 25.926020343131007 33 24.569238024829836 24.308766920743366 25.149896754786244 25.972098299640557 34 25.423815229306346 24.488490070614628 25.142631350855275 24.945063349223748 35 26.049149820276853 24.18334310551406 25.25326943176893 24.514237642440158 36 24.713271471180565 25.059716521783464 24.813521299105208 25.413490707930762 37 25.834947867540215 24.76349198256303 24.73130751778112 24.670252632115634 38 24.826092249019965 24.330196248882306 25.314021792401785 25.52968970969594 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 12.0 1 28.0 2 44.0 3 44.0 4 235.5 5 427.0 6 427.0 7 567.5 8 708.0 9 776.0 10 844.0 11 844.0 12 1124.5 13 1405.0 14 2004.0 15 2603.0 16 2603.0 17 4052.0 18 5501.0 19 5501.0 20 6749.0 21 7997.0 22 9142.5 23 10288.0 24 10288.0 25 12145.5 26 14003.0 27 14003.0 28 18186.0 29 22369.0 30 27474.0 31 32579.0 32 32579.0 33 41922.5 34 51266.0 35 51266.0 36 58113.5 37 64961.0 38 74626.5 39 84292.0 40 84292.0 41 90490.5 42 96689.0 43 110166.5 44 123644.0 45 123644.0 46 126445.0 47 129246.0 48 129246.0 49 137935.0 50 146624.0 51 149616.5 52 152609.0 53 152609.0 54 144554.0 55 136499.0 56 136499.0 57 132791.0 58 129083.0 59 115982.0 60 102881.0 61 102881.0 62 97178.0 63 91475.0 64 75827.0 65 60179.0 66 60179.0 67 50715.0 68 41251.0 69 41251.0 70 32860.5 71 24470.0 72 19057.0 73 13644.0 74 13644.0 75 10187.5 76 6731.0 77 6731.0 78 6585.5 79 6440.0 80 4951.5 81 3463.0 82 3463.0 83 3327.5 84 3192.0 85 3192.0 86 2036.5 87 881.0 88 746.0 89 611.0 90 611.0 91 358.0 92 105.0 93 72.5 94 40.0 95 40.0 96 24.0 97 8.0 98 8.0 99 12.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00994213169500599 2 0.0 3 0.0 4 1.9119484028857676E-4 5 6.373161342952558E-5 6 6.373161342952558E-5 7 3.823896805771535E-4 8 0.0019756800163152934 9 0.003951360032630587 10 0.0014020954954495628 11 0.006181966502663982 12 3.823896805771535E-4 13 6.373161342952558E-5 14 6.373161342952558E-5 15 0.0 16 6.373161342952558E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.2746322685905115E-4 22 1.2746322685905115E-4 23 6.373161342952558E-5 24 0.0 25 6.373161342952558E-5 26 6.373161342952558E-5 27 1.2746322685905115E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 6.373161342952558E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1569080.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.14360098101165 #Duplication Level Percentage of deduplicated Percentage of total 1 80.25879899341504 45.06017985901514 2 12.59364517900298 14.141051796527687 3 3.418766987199068 5.758256687290795 4 1.347393794186869 3.0259015818047565 5 0.6506067295093606 1.8263702308567262 6 0.3846705019811426 1.2958072303436836 7 0.2387872350474634 0.9384462670704681 8 0.18292532050709648 0.8216068963099276 9 0.12230856507142533 0.6180158946537183 >10 0.6509605241156631 6.619840383116412 >50 0.06239890761317143 2.5142986724720107 >100 0.07284248048413876 9.042795355607891 >500 0.011092042022013662 4.2951579305753205 >1k 0.004802739844583235 4.042271214355534 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3144 0.20037219262242842 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2612 0.16646697427792082 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2378 0.15155377673541184 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2237 0.14256761924184871 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2109 0.13440997272286945 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2078 0.13243429270655416 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1989 0.1267621791113264 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1968 0.12542381522930635 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1790 0.1140795880388508 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1741 0.11095673898080403 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1718 0.10949091187192495 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1705 0.10866240089734112 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1687 0.10751523185560967 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.373161342952558E-5 2 0.0 0.0 0.0 0.0 6.373161342952558E-5 3 0.0 0.0 0.0 0.0 6.373161342952558E-5 4 0.0 0.0 0.0 0.0 6.373161342952558E-5 5 0.0 0.0 0.0 0.0 6.373161342952558E-5 6 0.0 0.0 0.0 0.0 1.9119484028857676E-4 7 0.0 0.0 0.0 0.0 1.9119484028857676E-4 8 0.0 0.0 0.0 0.0 1.9119484028857676E-4 9 0.0 0.0 0.0 0.0 1.9119484028857676E-4 10 0.0 0.0 0.0 0.0 1.9119484028857676E-4 11 0.0 0.0 0.0 0.0 2.549264537181023E-4 12 0.0 0.0 0.0 0.0 4.461212940066791E-4 13 0.0 0.0 0.0 0.0 4.461212940066791E-4 14 0.0 0.0 0.0 0.0 6.373161342952558E-4 15 0.0 0.0 0.0 6.373161342952558E-5 7.64779361154307E-4 16 0.0 0.0 0.0 1.9119484028857676E-4 8.285109745838325E-4 17 0.0 0.0 0.0 2.549264537181023E-4 8.285109745838325E-4 18 0.0 0.0 0.0 2.549264537181023E-4 8.922425880133582E-4 19 0.0 0.0 0.0 3.186580671476279E-4 8.922425880133582E-4 20 0.0 0.0 0.0 3.186580671476279E-4 0.0010197058148724092 21 0.0 0.0 0.0 4.461212940066791E-4 0.0011471690417314605 22 0.0 0.0 0.0 5.735845208657302E-4 0.001210900655160986 23 0.0 0.0 0.0 8.285109745838325E-4 0.0014020954954495628 24 0.0 0.0 0.0 8.922425880133582E-4 0.0014658271088790883 25 0.0 0.0 0.0 0.0012746322685905115 0.0014658271088790883 26 0.0 0.0 0.0 0.0014020954954495628 0.0014658271088790883 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 380 0.0 17.683577 28 CTAGCGG 385 0.0 17.45392 29 CATCGTT 295 0.0 17.35531 28 GTATCAA 2590 0.0 16.866947 1 ATCGTTT 315 0.0 16.253386 29 ATTGGAC 90 8.577339E-6 16.001465 3 TAGCGGC 435 0.0 15.4477215 30 AGGCCCG 590 0.0 14.915195 10 GCGCAAG 515 0.0 14.914464 1 TACCGTC 430 0.0 14.885085 7 ACGGTAT 595 0.0 14.791271 9 GTTCAAA 660 0.0 14.789704 1 CGCAAGA 535 0.0 14.654147 2 ACCGTCG 455 0.0 14.418903 8 CAAGACG 555 0.0 14.415735 4 AGGGGCG 400 0.0 14.399484 32 AGCGGCG 490 0.0 14.366832 31 CGACGGT 595 0.0 14.253407 7 GACGGTA 595 0.0 14.253407 8 CGACAAT 90 1.5352166E-4 14.221711 17 >>END_MODULE