##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063042_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 752778 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19623448081639 32.0 32.0 32.0 32.0 32.0 2 31.301483305835188 32.0 32.0 32.0 32.0 32.0 3 31.379916788216445 32.0 32.0 32.0 32.0 32.0 4 31.479323253336307 32.0 32.0 32.0 32.0 32.0 5 31.394791027367962 32.0 32.0 32.0 32.0 32.0 6 34.92034570617101 36.0 36.0 36.0 36.0 36.0 7 34.95974776096007 36.0 36.0 36.0 36.0 36.0 8 34.894470879861 36.0 36.0 36.0 36.0 36.0 9 35.00129520256968 36.0 36.0 36.0 36.0 36.0 10 34.84660417812423 36.0 36.0 36.0 32.0 36.0 11 35.02842537906262 36.0 36.0 36.0 36.0 36.0 12 34.91717212777206 36.0 36.0 36.0 32.0 36.0 13 34.97137137376491 36.0 36.0 36.0 36.0 36.0 14 34.917857588824326 36.0 36.0 36.0 32.0 36.0 15 34.88046276591505 36.0 36.0 36.0 32.0 36.0 16 34.89242645242024 36.0 36.0 36.0 32.0 36.0 17 34.86570808392381 36.0 36.0 36.0 32.0 36.0 18 34.86669642311545 36.0 36.0 36.0 32.0 36.0 19 34.850423365188675 36.0 36.0 36.0 32.0 36.0 20 34.83503635866085 36.0 36.0 36.0 32.0 36.0 21 34.81470898458775 36.0 36.0 36.0 32.0 36.0 22 34.80009511436307 36.0 36.0 36.0 32.0 36.0 23 34.744127750810996 36.0 36.0 36.0 32.0 36.0 24 34.72409262757413 36.0 36.0 36.0 32.0 36.0 25 34.695744296459246 36.0 36.0 36.0 32.0 36.0 26 34.629691622231256 36.0 36.0 36.0 32.0 36.0 27 34.62237339560933 36.0 36.0 36.0 32.0 36.0 28 34.576572375919596 36.0 36.0 36.0 32.0 36.0 29 34.55010374904686 36.0 36.0 36.0 32.0 36.0 30 34.516783168477296 36.0 36.0 36.0 32.0 36.0 31 34.50820693484666 36.0 36.0 36.0 32.0 36.0 32 34.48444029979622 36.0 36.0 36.0 32.0 36.0 33 34.444451086508906 36.0 36.0 36.0 32.0 36.0 34 34.42750850848457 36.0 36.0 36.0 32.0 36.0 35 34.393886378188526 36.0 36.0 36.0 32.0 36.0 36 34.36054852825136 36.0 36.0 36.0 32.0 36.0 37 34.34028624640997 36.0 36.0 36.0 32.0 36.0 38 33.91002128117453 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 4.0 21 17.0 22 56.0 23 170.0 24 477.0 25 1124.0 26 2557.0 27 4879.0 28 8963.0 29 13918.0 30 21447.0 31 31003.0 32 44211.0 33 70418.0 34 171592.0 35 381939.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.119163674190034 18.39313636792384 11.945196161658835 26.542503796227283 2 15.643788739840964 20.95890156194788 37.19104437164742 26.206265326563745 3 18.22981011666122 24.974029527961765 28.738485981258748 28.057674374118264 4 12.047010000318819 16.38668076559295 36.369916150355486 35.196393083732744 5 13.888442393962622 37.23758828975912 33.334573187012886 15.539396129265374 6 33.52803490015622 36.249827305865225 16.693810642209638 13.528327151768918 7 29.54083225399356 30.837102719936237 20.971605061273287 18.650459964796916 8 27.767113333448467 33.240298049447304 19.52292958854138 19.469659028562848 9 27.66607549701426 14.098665550750919 18.518223302712077 39.71703564952275 10 16.015499942213964 26.57307542605579 31.33384787261035 26.077576759119896 11 37.504682854508694 21.093303717322975 22.370759857906915 19.031253570261416 12 25.097571926916036 23.981572256362433 28.52261888631177 22.398236930409762 13 29.906147255155922 19.528411543954036 25.07894125070572 25.486499950184317 14 23.72146901211247 20.093971927978764 25.05426566663744 31.130293393271323 15 25.14459774329218 27.691298098509787 22.383890071176364 24.780214087021672 16 25.361660409841946 25.726309748690852 24.356051850612 24.555977990855204 17 23.829203297652164 25.90591117168674 25.544981388935383 24.719904141725717 18 24.86602955984367 24.256288042424192 27.24163033457407 23.63605206315806 19 25.662147406008145 24.75391151176044 25.783564344335247 23.800376737896165 20 25.944966510710994 23.956199570125587 25.628405718551818 24.4704282006116 21 26.96060979627406 24.108101214703975 24.452958117687068 24.4783308713349 22 25.751815276216895 24.758428115593176 25.121084835104107 24.368671773085822 23 23.73611308528289 24.382652498681548 26.041576721924287 25.839657694111274 24 24.69187462970491 25.100627276567593 25.724582811931274 24.482915281796227 25 24.676199357579527 24.49566804555925 25.817306031791574 25.01082656506965 26 24.020893277965083 25.634117893987334 26.292080799385744 24.052908028661836 27 25.14223999936236 24.935405837319685 25.290092550649128 24.632261612668824 28 24.05038404416707 24.892730658972496 26.144892650954198 24.91199264590623 29 24.14788955043851 24.907210359495096 26.077010752173948 24.867889337892446 30 24.105114655316704 25.007107008972103 26.4668999359705 24.420878399740694 31 24.96698893963426 24.82551296663824 25.051077475696687 25.15642061803081 32 24.425660686151826 25.12520291506925 25.272656746079193 25.176479652699733 33 23.832790012460514 24.635018557928102 26.199888944682233 25.332302484929155 34 24.64285619399079 24.933247252177935 26.269630621511254 24.154265932320023 35 25.53887068963227 24.76825837099384 25.93154954050198 23.761321398871914 36 24.068583300787218 25.459165916113385 25.72909941576401 24.74315136733539 37 25.16744644503426 25.35714380600921 25.175284081096947 24.300125667859582 38 24.310752970995434 25.148981505835717 25.78821378945718 24.752051733711667 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 300.0 1 227.0 2 154.0 3 154.0 4 421.5 5 689.0 6 689.0 7 817.5 8 946.0 9 885.0 10 824.0 11 824.0 12 1062.5 13 1301.0 14 1653.0 15 2005.0 16 2005.0 17 3158.0 18 4311.0 19 4311.0 20 4905.5 21 5500.0 22 5527.0 23 5554.0 24 5554.0 25 6468.5 26 7383.0 27 7383.0 28 9652.0 29 11921.0 30 15574.0 31 19227.0 32 19227.0 33 24315.5 34 29404.0 35 29404.0 36 32281.5 37 35159.0 38 39651.5 39 44144.0 40 44144.0 41 45829.0 42 47514.0 43 52781.5 44 58049.0 45 58049.0 46 60840.5 47 63632.0 48 63632.0 49 66363.0 50 69094.0 51 68570.5 52 68047.0 53 68047.0 54 64246.0 55 60445.0 56 60445.0 57 59047.0 58 57649.0 59 51478.5 60 45308.0 61 45308.0 62 43205.5 63 41103.0 64 33987.5 65 26872.0 66 26872.0 67 22589.0 68 18306.0 69 18306.0 70 14824.0 71 11342.0 72 8896.0 73 6450.0 74 6450.0 75 4810.5 76 3171.0 77 3171.0 78 3063.0 79 2955.0 80 2297.5 81 1640.0 82 1640.0 83 1624.5 84 1609.0 85 1609.0 86 997.0 87 385.0 88 343.0 89 301.0 90 301.0 91 178.0 92 55.0 93 34.0 94 13.0 95 13.0 96 8.0 97 3.0 98 3.0 99 8.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007571953484294174 2 0.0 3 0.0 4 2.656825783962868E-4 5 1.328412891981434E-4 6 2.656825783962868E-4 7 3.9852386759443024E-4 8 0.002258301916368438 9 0.0043837625435387325 10 1.328412891981434E-4 11 0.004250921254340589 12 0.0 13 3.9852386759443024E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 2.656825783962868E-4 22 0.0 23 1.328412891981434E-4 24 0.0 25 0.0 26 0.0 27 1.328412891981434E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 752778.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.076238404317635 #Duplication Level Percentage of deduplicated Percentage of total 1 81.66591773329031 46.61183390052669 2 11.998008155491975 13.696023477196146 3 2.9520458358657873 5.054750157250464 4 1.129852758727882 2.579509816757142 5 0.5615341807913607 1.602512938751045 6 0.33159548188653376 1.1355733666770234 7 0.21686361967603285 0.8664431760496762 8 0.13240539445193233 0.6045761487804964 9 0.1119892742034178 0.5752733861844694 >10 0.6969326362012985 7.734152995683734 >50 0.09569531245916592 3.8643443687037182 >100 0.09826864436888032 11.405103471446687 >500 0.007487134808776008 2.98588717756933 >1k 0.0014038377766455014 1.2840156184234137 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3048 0.4049002494759411 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2138 0.2840146763056306 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1297 0.17229515208999202 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1069 0.1420073381528153 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1053 0.13988187752564502 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1010 0.13416970209012483 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 993 0.1319114001737564 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 977 0.12978593954658613 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 917 0.1218154621946975 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 916 0.12168262090549936 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 882 0.11716601707276249 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 870 0.11557192160238476 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 854 0.11344646097521448 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 838 0.11132100034804418 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 815 0.10826565069648687 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 805 0.10693723780450545 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 775 0.10295199912856114 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.656825783962868E-4 2 0.0 0.0 0.0 0.0 2.656825783962868E-4 3 0.0 0.0 0.0 0.0 2.656825783962868E-4 4 0.0 0.0 0.0 0.0 2.656825783962868E-4 5 0.0 0.0 0.0 0.0 2.656825783962868E-4 6 1.328412891981434E-4 0.0 0.0 0.0 3.9852386759443024E-4 7 1.328412891981434E-4 0.0 0.0 0.0 3.9852386759443024E-4 8 1.328412891981434E-4 0.0 0.0 0.0 3.9852386759443024E-4 9 1.328412891981434E-4 0.0 0.0 0.0 3.9852386759443024E-4 10 1.328412891981434E-4 0.0 0.0 0.0 3.9852386759443024E-4 11 1.328412891981434E-4 0.0 0.0 0.0 3.9852386759443024E-4 12 1.328412891981434E-4 0.0 0.0 0.0 5.313651567925736E-4 13 1.328412891981434E-4 0.0 0.0 0.0 6.642064459907171E-4 14 1.328412891981434E-4 0.0 0.0 0.0 6.642064459907171E-4 15 1.328412891981434E-4 0.0 0.0 0.0 0.0011955716027832906 16 2.656825783962868E-4 0.0 0.0 1.328412891981434E-4 0.0011955716027832906 17 2.656825783962868E-4 0.0 0.0 1.328412891981434E-4 0.0011955716027832906 18 2.656825783962868E-4 0.0 0.0 1.328412891981434E-4 0.0011955716027832906 19 2.656825783962868E-4 0.0 0.0 1.328412891981434E-4 0.0011955716027832906 20 2.656825783962868E-4 0.0 0.0 2.656825783962868E-4 0.0011955716027832906 21 2.656825783962868E-4 0.0 0.0 2.656825783962868E-4 0.0014612541811795776 22 2.656825783962868E-4 0.0 0.0 5.313651567925736E-4 0.0014612541811795776 23 2.656825783962868E-4 0.0 0.0 0.001594095470377721 0.0014612541811795776 24 2.656825783962868E-4 0.0 0.0 0.0027896670731610116 0.0014612541811795776 25 2.656825783962868E-4 0.0 0.0 0.003985238675944303 0.0014612541811795776 26 2.656825783962868E-4 0.0 0.0 0.00504796898952945 0.0014612541811795776 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCTAA 35 0.0020646604 22.859468 9 TACGCCT 95 1.718945E-9 20.212582 5 CATTCCG 40 0.00447943 20.002033 9 ATAAGAT 65 9.423855E-6 19.693003 3 GATATAC 90 2.0347215E-8 19.556246 1 ACCGTCC 50 7.1878626E-4 19.201952 8 CACCGTC 60 1.1366326E-4 18.668564 7 GTACGCC 80 2.7926417E-6 18.000633 4 TGCGTAG 80 2.7944134E-6 17.99944 13 GAGTAGT 45 0.0088457195 17.778404 1 TCTAGCG 260 0.0 17.230232 28 TAACGAA 140 4.0017767E-11 17.142323 13 TAGTACG 85 4.9808023E-6 16.940647 2 ACGCCTG 95 7.675553E-7 16.843819 6 TGAACGG 60 0.002439199 16.001627 5 TAGAACC 190 0.0 16.000565 4 CTAGTAC 120 3.1035597E-8 16.000565 1 CTAGCGG 270 0.0 15.999503 29 ACGTTTT 190 0.0 15.999502 29 AACCCGT 70 3.6951562E-4 15.999502 29 >>END_MODULE