##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063029_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1502128 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.257371542238744 32.0 32.0 32.0 32.0 32.0 2 30.855363857141334 32.0 32.0 32.0 32.0 32.0 3 30.90112427169988 32.0 32.0 32.0 32.0 32.0 4 30.984379493625045 32.0 32.0 32.0 32.0 32.0 5 30.867008670366307 32.0 32.0 32.0 32.0 32.0 6 34.532915304155175 36.0 36.0 36.0 32.0 36.0 7 34.469274256255126 36.0 36.0 36.0 32.0 36.0 8 34.45514496767253 36.0 36.0 36.0 32.0 36.0 9 34.61694742392126 36.0 36.0 36.0 32.0 36.0 10 34.30849701223864 36.0 36.0 36.0 32.0 36.0 11 34.587535150133675 36.0 36.0 36.0 32.0 36.0 12 34.39395644046313 36.0 36.0 36.0 32.0 36.0 13 34.49697229530373 36.0 36.0 36.0 32.0 36.0 14 34.38926975597286 36.0 36.0 36.0 32.0 36.0 15 34.31448252079716 36.0 36.0 36.0 32.0 36.0 16 34.3373780396877 36.0 36.0 36.0 32.0 36.0 17 34.25457817176699 36.0 36.0 36.0 32.0 36.0 18 34.28554890129203 36.0 36.0 36.0 32.0 36.0 19 34.27923053161914 36.0 36.0 36.0 32.0 36.0 20 34.26825343778959 36.0 36.0 36.0 32.0 36.0 21 34.25387317192676 36.0 36.0 36.0 32.0 36.0 22 34.22924278090815 36.0 36.0 36.0 32.0 36.0 23 34.17231687312932 36.0 36.0 36.0 32.0 36.0 24 34.15310213244144 36.0 36.0 36.0 32.0 36.0 25 34.13030114610739 36.0 36.0 36.0 32.0 36.0 26 34.07441176783869 36.0 36.0 36.0 32.0 36.0 27 34.09519694726415 36.0 36.0 36.0 32.0 36.0 28 34.071636371867115 36.0 36.0 36.0 32.0 36.0 29 34.043713318705194 36.0 36.0 36.0 32.0 36.0 30 34.02031251664305 36.0 36.0 36.0 32.0 36.0 31 34.03964975022102 36.0 36.0 36.0 32.0 36.0 32 33.99781643108976 36.0 36.0 36.0 32.0 36.0 33 33.9554385511754 36.0 36.0 36.0 32.0 36.0 34 33.96432527720673 36.0 36.0 36.0 32.0 36.0 35 33.9285400445235 36.0 36.0 36.0 32.0 36.0 36 33.88447322731485 36.0 36.0 36.0 32.0 36.0 37 33.89124695099219 36.0 36.0 36.0 32.0 36.0 38 33.28922235655018 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 2.0 9 6.0 10 11.0 11 11.0 12 3.0 13 8.0 14 153.0 15 391.0 16 476.0 17 552.0 18 684.0 19 854.0 20 1190.0 21 1804.0 22 2685.0 23 4199.0 24 6403.0 25 9902.0 26 14115.0 27 20599.0 28 28826.0 29 38900.0 30 52686.0 31 71819.0 32 99049.0 33 148813.0 34 329424.0 35 668560.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.83471083193806 17.103533683840073 11.196930755366912 25.864824728854952 2 17.33693628647607 19.10713013059484 36.55330063855396 27.002632944375137 3 19.044261527778055 23.040775413976014 28.107025557954646 29.80793750029129 4 12.76000404768816 14.58519185242981 35.30622624979029 37.34857785009174 5 15.205935062618 35.916209314277644 33.14899435732336 15.728861265780989 6 35.520855108026886 34.86238837487667 16.128939915825967 13.487816601270467 7 31.259607210309113 29.781702878651405 20.428499055006665 18.530190856032814 8 28.95326883799207 31.99549437995798 19.089169735654313 19.96206704639564 9 27.398984771573602 13.869152034617624 18.48434717483565 40.24751601897312 10 16.46226666311613 25.598820333928046 30.60601017228983 27.33290283066599 11 38.556784350484385 20.661285769826858 21.608423917385213 19.17350596230354 12 25.219060274362924 23.34208553636314 27.773420908622477 23.665433280651463 13 29.417380964111793 18.40583724271643 25.33566542516289 26.841116368008883 14 24.03308093871358 19.31887407099672 24.156448712494498 32.491596277795196 15 25.649734819101017 26.584543266269588 21.700020974760374 26.065700939869025 16 26.81062302303022 25.142295219053747 22.770497402433982 25.27658435548205 17 24.713151103049867 25.515369188113752 24.40665958200496 25.36482012683143 18 26.073097238847602 23.806134799414668 25.355013867677194 24.765754094060533 19 26.09772449317228 24.410218376486895 24.772659032155623 24.7193980981852 20 26.1972462985611 23.568773630189654 24.233864229643334 26.000115841605908 21 27.79339716161435 23.565711150952932 23.80351932124808 24.83737236618464 22 26.522905667663093 23.311185528917534 24.607298123206593 25.55861068021278 23 24.679863170383232 23.149717645774274 25.372932609150112 26.797486574692382 24 25.37895659850874 24.4665445589842 24.58399164288097 25.570507199626086 25 25.47945424377928 23.782754827833248 24.7050434245324 26.032747503855074 26 25.240450078601956 24.930503352152083 25.178660484156097 24.650386085089863 27 26.154570312161912 23.92176078838409 24.180281210032696 25.743387689421304 28 25.041942399105228 23.79405616286966 25.467358161458264 25.69664327656685 29 24.91641111748782 24.26560958299434 25.39863674555291 25.41934255396493 30 24.742242647083298 24.58519490496914 25.526948766752483 25.14561368119508 31 25.655016673756926 24.336494989218146 24.029649927666053 25.978838409358872 32 25.361091045874122 24.08815980879401 23.83936566481031 26.711383480521555 33 24.857375496081612 23.84953339533868 24.75877501046923 26.534316098110477 34 26.120353485015237 23.95165247520072 24.776575126218493 25.15141891356555 35 26.606370151094172 23.62510162053544 25.00041613650875 24.768112091861635 36 24.9948566417899 24.626732013393372 24.383446176504076 25.99496516831265 37 26.41537572469847 24.225101930487536 24.339216140569533 25.020306204244463 38 25.177224223928334 23.878001560531857 24.95313078375449 25.991643431785317 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 87.0 1 115.5 2 144.0 3 144.0 4 381.5 5 619.0 6 619.0 7 747.5 8 876.0 9 885.0 10 894.0 11 894.0 12 1177.5 13 1461.0 14 2037.0 15 2613.0 16 2613.0 17 3884.5 18 5156.0 19 5156.0 20 6342.0 21 7528.0 22 8061.0 23 8594.0 24 8594.0 25 10060.5 26 11527.0 27 11527.0 28 14892.0 29 18257.0 30 22460.5 31 26664.0 32 26664.0 33 35468.5 34 44273.0 35 44273.0 36 49612.0 37 54951.0 38 64349.0 39 73747.0 40 73747.0 41 79784.5 42 85822.0 43 100056.5 44 114291.0 45 114291.0 46 116617.0 47 118943.0 48 118943.0 49 129187.5 50 139432.0 51 144014.0 52 148596.0 53 148596.0 54 142212.0 55 135828.0 56 135828.0 57 132812.5 58 129797.0 59 117077.0 60 104357.0 61 104357.0 62 100104.5 63 95852.0 64 79808.0 65 63764.0 66 63764.0 67 53293.0 68 42822.0 69 42822.0 70 34347.0 71 25872.0 72 19808.5 73 13745.0 74 13745.0 75 10354.0 76 6963.0 77 6963.0 78 6793.5 79 6624.0 80 5324.0 81 4024.0 82 4024.0 83 3967.5 84 3911.0 85 3911.0 86 2609.5 87 1308.0 88 1140.0 89 972.0 90 972.0 91 712.0 92 452.0 93 399.0 94 346.0 95 346.0 96 309.5 97 273.0 98 273.0 99 508.0 100 743.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12142773452062673 2 0.051060894943706525 3 0.011250705665562456 4 0.0023966000234334223 5 2.662888914926025E-4 6 1.3314444574630125E-4 7 6.657222287315062E-5 8 2.662888914926025E-4 9 1.997166686194519E-4 10 5.32577782985205E-4 11 0.001597733348955615 12 0.0019971666861945186 13 0.012382433454406015 14 0.007655805630412322 15 0.02150282798802765 16 0.00965297231660684 17 0.01943908907895998 18 0.004926344492613146 19 0.005924927835710405 20 0.005126061161232598 21 0.005126061161232598 22 0.006524077841568761 23 0.007589233407539171 24 0.011650139002801358 25 0.014113311249107932 26 0.017109061278399708 27 0.007922094521904925 28 0.004526911155374242 29 0.008920677865002183 30 0.002463172246306573 31 0.004460338932501091 32 0.0055254944984715025 33 0.007123227847427116 34 0.011250705665562456 35 0.014446172363473685 36 0.01271529456877177 37 0.008254955636270676 38 0.0050594889383594474 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1502128.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.901468987470004 #Duplication Level Percentage of deduplicated Percentage of total 1 77.93399505835403 38.11086842415741 2 12.70849657456706 12.429283022371198 3 3.9198786306610947 5.750634698757597 4 1.7577862279780552 3.4383331485628306 5 0.972490760593371 2.3778113384878927 6 0.576681211646579 1.6920335032195088 7 0.39523047359455493 1.352914552317105 8 0.27276949718719823 1.0671063285942048 9 0.20408598640437192 0.8982094081437557 >10 1.0567994969242815 9.191179025238608 >50 0.08708708480564223 3.0116196818083605 >100 0.09214203924197427 9.98539119472964 >500 0.015448098537693874 5.2131680360326955 >1k 0.007108859504071518 5.481447637579236 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3149 0.2096359298275513 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2598 0.17295463502444533 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2476 0.16483282383392095 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2242 0.1492549236816037 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2215 0.14745747366402862 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2189 0.14572659586932674 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2164 0.14406229029749795 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2159 0.1437294291831322 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2136 0.14219826805704974 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2090 0.1391359458048848 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2055 0.13680591800432454 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1808 0.12036257895465634 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1788 0.11903113449719331 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1777 0.11829884004558866 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1773 0.11803255115409605 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1767 0.11763311781685716 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1752 0.1166345344737599 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1740 0.11583566779928209 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1715 0.11417136222745333 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1689 0.1124404844327514 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1676 0.11157504553540044 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1567 0.10431867324222702 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1529 0.10178892877304731 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1505 0.10019119542409169 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 6.657222287315062E-5 6.657222287315062E-5 2 0.0 0.0 0.0 1.3314444574630125E-4 1.3314444574630125E-4 3 0.0 0.0 0.0 1.9971666861945186E-4 1.3314444574630125E-4 4 0.0 0.0 0.0 2.662888914926025E-4 1.3314444574630125E-4 5 0.0 0.0 0.0 2.662888914926025E-4 1.9971666861945186E-4 6 0.0 0.0 0.0 2.662888914926025E-4 2.662888914926025E-4 7 0.0 0.0 0.0 2.662888914926025E-4 2.662888914926025E-4 8 0.0 0.0 0.0 2.662888914926025E-4 2.662888914926025E-4 9 0.0 0.0 0.0 3.994333372389037E-4 3.3286111436575314E-4 10 0.0 0.0 0.0 3.994333372389037E-4 3.3286111436575314E-4 11 0.0 0.0 0.0 3.994333372389037E-4 3.3286111436575314E-4 12 0.0 0.0 0.0 3.994333372389037E-4 5.32577782985205E-4 13 0.0 0.0 0.0 3.994333372389037E-4 5.32577782985205E-4 14 0.0 0.0 0.0 3.994333372389037E-4 6.657222287315063E-4 15 0.0 0.0 0.0 3.994333372389037E-4 7.322944516046569E-4 16 0.0 0.0 0.0 3.994333372389037E-4 7.322944516046569E-4 17 0.0 0.0 0.0 4.6600556011205436E-4 7.322944516046569E-4 18 0.0 0.0 0.0 5.991500058583556E-4 9.985833430972593E-4 19 0.0 0.0 0.0 6.657222287315063E-4 9.985833430972593E-4 20 0.0 0.0 0.0 7.988666744778074E-4 0.00106515556597041 21 0.0 0.0 0.0 7.988666744778074E-4 0.0011317277888435607 22 0.0 0.0 0.0 9.320111202241087E-4 0.0011317277888435607 23 0.0 0.0 0.0 9.985833430972593E-4 0.001398016680336163 24 0.0 0.0 0.0 0.001398016680336163 0.001398016680336163 25 0.0 0.0 0.0 0.0019305944633213681 0.001398016680336163 26 0.0 0.0 0.0 0.002596316692052874 0.0015311611260824644 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGCGT 35 0.0020687848 22.853434 4 GTACTAA 65 9.3340095E-6 19.717337 1 CTAGCGG 545 0.0 18.494259 29 TCTAGCG 545 0.0 18.493027 28 TAGCGGC 560 0.0 17.998877 30 GTCCTAT 590 0.0 16.834929 1 ATCGTTT 375 0.0 16.638962 29 GTATTAG 340 0.0 16.491522 1 CTATTCC 630 0.0 16.251331 4 GTATCAA 2350 0.0 15.952165 1 CGAGCCG 615 0.0 15.869985 15 CCTATTC 640 0.0 15.752164 3 AGCGGCG 655 0.0 15.632612 31 AGGCCCG 605 0.0 15.602851 10 GTATTAA 165 2.910383E-11 15.534871 1 CGAACGA 240 0.0 15.333398 16 GTTCAAA 690 0.0 15.09162 1 CATCGTT 425 0.0 15.056882 28 TCGTTTA 415 0.0 15.035205 30 CGGTCCA 725 0.0 14.565093 10 >>END_MODULE