##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063017_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2382905 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25924575255833 32.0 32.0 32.0 32.0 32.0 2 30.89666688348885 32.0 32.0 32.0 32.0 32.0 3 30.941988455267836 32.0 32.0 32.0 32.0 32.0 4 31.004049259202528 32.0 32.0 32.0 32.0 32.0 5 30.923797633560717 32.0 32.0 32.0 32.0 32.0 6 34.57374968788097 36.0 36.0 36.0 32.0 36.0 7 34.509875970716415 36.0 36.0 36.0 32.0 36.0 8 34.497781069744704 36.0 36.0 36.0 32.0 36.0 9 34.63062018838351 36.0 36.0 36.0 32.0 36.0 10 34.36583371976642 36.0 36.0 36.0 32.0 36.0 11 34.61402615714852 36.0 36.0 36.0 32.0 36.0 12 34.43845684154425 36.0 36.0 36.0 32.0 36.0 13 34.52329866276666 36.0 36.0 36.0 32.0 36.0 14 34.42672452321851 36.0 36.0 36.0 32.0 36.0 15 34.37504852270653 36.0 36.0 36.0 32.0 36.0 16 34.38918169209431 36.0 36.0 36.0 32.0 36.0 17 34.319624995541155 36.0 36.0 36.0 32.0 36.0 18 34.34736508589306 36.0 36.0 36.0 32.0 36.0 19 34.32869669583974 36.0 36.0 36.0 32.0 36.0 20 34.31479265854073 36.0 36.0 36.0 32.0 36.0 21 34.3033180089009 36.0 36.0 36.0 32.0 36.0 22 34.27095876671542 36.0 36.0 36.0 32.0 36.0 23 34.21919254019778 36.0 36.0 36.0 32.0 36.0 24 34.20484282839643 36.0 36.0 36.0 32.0 36.0 25 34.18428892465289 36.0 36.0 36.0 32.0 36.0 26 34.14152011935012 36.0 36.0 36.0 32.0 36.0 27 34.14275180924124 36.0 36.0 36.0 32.0 36.0 28 34.124729689181905 36.0 36.0 36.0 32.0 36.0 29 34.09404319517564 36.0 36.0 36.0 32.0 36.0 30 34.06688264953911 36.0 36.0 36.0 32.0 36.0 31 34.08597699027028 36.0 36.0 36.0 32.0 36.0 32 34.035808813192304 36.0 36.0 36.0 32.0 36.0 33 34.00571151598574 36.0 36.0 36.0 32.0 36.0 34 34.01465312297385 36.0 36.0 36.0 32.0 36.0 35 33.97443288758889 36.0 36.0 36.0 32.0 36.0 36 33.930701391788595 36.0 36.0 36.0 32.0 36.0 37 33.93752709403019 36.0 36.0 36.0 32.0 36.0 38 33.348838917204 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 7.0 10 25.0 11 24.0 12 9.0 13 12.0 14 225.0 15 615.0 16 752.0 17 974.0 18 1126.0 19 1485.0 20 1997.0 21 2818.0 22 4337.0 23 6590.0 24 10043.0 25 15046.0 26 21670.0 27 31885.0 28 44741.0 29 60417.0 30 81398.0 31 109837.0 32 150233.0 33 226498.0 34 510138.0 35 1099999.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.702720599109945 16.993534627640265 11.378559568146066 25.92518520510373 2 17.01814001354528 19.219647293609743 37.20229035358394 26.55992233926104 3 19.38345016422918 22.970050943362967 28.079832253721282 29.566666638686566 4 12.861383869930766 15.010529390386488 35.39746874965902 36.73061799002373 5 15.088637831481739 35.92418310637589 33.25411609975916 15.733062962383215 6 34.97199834654905 34.854871910008626 16.545000933738162 13.628128809704162 7 31.21484070913444 29.883818280628056 20.215745067470166 18.685595942767335 8 28.524265170898833 32.502399386294265 19.10503205966173 19.868303383145168 9 27.42822515226176 14.489972944765272 18.40859657317146 39.67320532980151 10 16.135513926523952 26.080543069597155 31.121503681020474 26.662439322858418 11 37.78049253376822 21.08926156865148 21.939373744681813 19.19087215289849 12 25.427703557348746 23.373182107752 28.04957273709293 23.149541597806316 13 29.433784875607273 19.104246456040208 25.114634376672296 26.34733429168022 14 23.8184153204991 19.64540078650601 24.782577674812924 31.75360621818197 15 25.367145056034563 26.81935502015011 22.1842628073149 25.629237116500427 16 26.188197807308022 25.664493448868946 23.293679873014913 24.85362887080812 17 24.27875201527178 25.671152137331877 24.973294107326417 25.07680174006992 18 25.28910546122367 24.530454120626278 25.94577512578789 24.23466529236216 19 25.75167853398659 24.818422870534437 25.266815347411836 24.163083248067135 20 25.840076214138225 24.089711091339456 24.90850945961826 25.16170323490406 21 26.94336353899821 24.029829073316165 24.402167891568492 24.624639496117133 22 25.969121082323355 24.1336603537293 24.90936851320714 24.9878500507402 23 24.455664326859516 24.003147722622682 25.5265195630961 26.0146683874217 24 24.935112357192622 24.92487135793971 25.089860571313448 25.05015571355421 25 25.095361374278287 24.3098892095583 25.138425093472616 25.456324322690804 26 24.716157828419558 25.1827712733674 25.606152565009825 24.494918333203216 27 25.50483504280212 24.590959282060883 24.732185088485416 25.172020586651577 28 24.646306440829903 24.54449272132628 25.57345759139628 25.235743246447534 29 24.600404589828177 24.81931958399436 25.565754241058315 25.014521585119155 30 24.609939911987304 24.939882610567736 25.721639490389194 24.72853798705577 31 25.232407396915445 24.808028615350914 24.598231391355547 25.361332596378087 32 24.834047003613048 24.78674877337265 24.58823889845066 25.790965324563647 33 24.461747789913343 24.451255544102686 25.239516987365658 25.847479678618313 34 25.3752779486904 24.518620988368337 25.378719517978844 24.727381544962423 35 25.87492041026958 24.462221058193997 25.26296614818443 24.39989238335199 36 24.660083011306714 25.05495123536925 24.9725191358732 25.31244661745084 37 25.65960306091914 24.821262417199435 24.714575963315305 24.80455855856612 38 24.699238117461018 24.68450743710503 25.329509791495823 25.286744653938126 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 196.0 1 279.5 2 363.0 3 363.0 4 795.5 5 1228.0 6 1228.0 7 1465.5 8 1703.0 9 1663.5 10 1624.0 11 1624.0 12 2198.0 13 2772.0 14 3754.0 15 4736.0 16 4736.0 17 7043.0 18 9350.0 19 9350.0 20 11346.0 21 13342.0 22 14601.5 23 15861.0 24 15861.0 25 18749.5 26 21638.0 27 21638.0 28 27811.5 29 33985.0 30 42113.0 31 50241.0 32 50241.0 33 64150.0 34 78059.0 35 78059.0 36 87599.0 37 97139.0 38 111499.5 39 125860.0 40 125860.0 41 135064.0 42 144268.0 43 163696.5 44 183125.0 45 183125.0 46 189477.5 47 195830.0 48 195830.0 49 209510.5 50 223191.0 51 225979.0 52 228767.0 53 228767.0 54 219867.5 55 210968.0 56 210968.0 57 204385.0 58 197802.0 59 176980.5 60 156159.0 61 156159.0 62 146823.0 63 137487.0 64 114274.5 65 91062.0 66 91062.0 67 76086.5 68 61111.0 69 61111.0 70 49224.5 71 37338.0 72 29185.0 73 21032.0 74 21032.0 75 15927.0 76 10822.0 77 10822.0 78 10218.0 79 9614.0 80 7517.0 81 5420.0 82 5420.0 83 5393.0 84 5366.0 85 5366.0 86 3579.5 87 1793.0 88 1546.5 89 1300.0 90 1300.0 91 938.5 92 577.0 93 501.5 94 426.0 95 426.0 96 378.0 97 330.0 98 330.0 99 675.0 100 1020.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11922422421372234 2 0.053044498207020424 3 0.010869086262356241 4 0.0021402447852516154 5 2.5179350414724884E-4 6 4.196558402454147E-4 7 0.0 8 1.678623360981659E-4 9 8.393116804908296E-5 10 2.5179350414724884E-4 11 0.0018045201130552832 12 0.0026438317935461126 13 0.013848642728098685 14 0.009022600565276418 15 0.022493553037154227 16 0.011036948598454407 17 0.019807755659583575 18 0.005203732419043143 19 0.007176114868196592 20 0.006085009683558514 21 0.00541356033916585 22 0.007511839540392924 23 0.009652084325644539 24 0.013638814807975979 25 0.016324612185546632 26 0.017583579706282878 27 0.00822525446881013 28 0.00511980125099406 29 0.01028156808601266 30 0.0028116941296442784 31 0.005371594755141309 32 0.006378768771730305 33 0.008099357716736505 34 0.01137267327065074 35 0.015695128425178513 36 0.01418436740029502 37 0.009316359653448207 38 0.005161766835018601 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2382905.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.162339508330035 #Duplication Level Percentage of deduplicated Percentage of total 1 78.42725433522124 41.693763216751805 2 12.850115425991637 13.662843979955932 3 3.9316378361617934 6.270451964094881 4 1.6256427203321064 3.456918808701627 5 0.8508844719804198 2.261750459089461 6 0.5145638168539148 1.641324979817399 7 0.34439399926622144 1.2816153499535703 8 0.24503372115500144 1.0421252700025327 9 0.17898393738852472 0.8563684361387794 >10 0.880707488512014 8.399918263517987 >50 0.0660926519709733 2.4807715640930965 >100 0.06744198173071696 7.827497249002866 >500 0.011946741416292678 4.394334753120576 >1k 0.005221754526326325 4.493471846932427 >5k 7.911749282312615E-5 0.23684385882710865 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5631 0.23630820364219304 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3549 0.1489358577030977 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3115 0.13072279423644667 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3001 0.12593871765764897 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2539 0.10655061783831081 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2511 0.10537558148562365 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2464 0.10340319903647019 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2457 0.1031094399482984 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 4.196558402454147E-5 7 0.0 0.0 0.0 4.196558402454147E-5 4.196558402454147E-5 8 0.0 0.0 0.0 4.196558402454147E-5 4.196558402454147E-5 9 0.0 0.0 0.0 4.196558402454147E-5 4.196558402454147E-5 10 0.0 0.0 0.0 8.393116804908294E-5 8.393116804908294E-5 11 0.0 0.0 0.0 1.6786233609816589E-4 8.393116804908294E-5 12 0.0 0.0 0.0 2.0982792012270738E-4 2.9375908817179033E-4 13 0.0 0.0 0.0 2.5179350414724884E-4 3.3572467219633177E-4 14 0.0 0.0 0.0 2.5179350414724884E-4 3.3572467219633177E-4 15 0.0 0.0 0.0 2.9375908817179033E-4 3.7769025622087326E-4 16 0.0 0.0 0.0 2.9375908817179033E-4 5.035870082944977E-4 17 0.0 0.0 0.0 3.3572467219633177E-4 5.455525923190391E-4 18 0.0 0.0 0.0 4.1965584024541476E-4 5.875181763435807E-4 19 0.0 0.0 0.0 5.035870082944977E-4 5.875181763435807E-4 20 0.0 0.0 0.0 6.714493443926635E-4 5.875181763435807E-4 21 0.0 0.0 0.0 8.393116804908295E-4 5.875181763435807E-4 22 0.0 0.0 0.0 0.0010071740165889954 5.875181763435807E-4 23 0.0 0.0 0.0 0.001594692192932576 5.875181763435807E-4 24 0.0 0.0 0.0 0.0028956252976933615 5.875181763435807E-4 25 0.0 0.0 0.0 0.003357246721963318 5.875181763435807E-4 26 0.0 0.0 0.0 0.004070661650380523 5.875181763435807E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 700 0.0 19.65655 28 CTAGCGG 710 0.0 19.380917 29 TAGCGGC 735 0.0 18.939 30 CAAGACG 785 0.0 17.727484 4 AAGACGG 785 0.0 17.524824 5 TAGATCG 55 0.0013672335 17.450722 5 CGCAAGA 775 0.0 16.313637 2 AGCGGCG 890 0.0 16.000189 31 GCGCAAG 795 0.0 15.916596 1 GACGGAC 865 0.0 15.720749 7 ACACCGT 165 2.910383E-11 15.511754 6 CGGTCCA 935 0.0 15.059002 10 AGACGGA 915 0.0 15.034958 6 CGCCGGT 905 0.0 14.6723585 7 GTATCAA 4210 0.0 14.64768 1 GCCGGTC 930 0.0 14.622294 8 CCGGTCC 955 0.0 14.575783 9 CGACGCT 110 3.5456378E-6 14.545626 15 TCGACGC 110 3.5456378E-6 14.545626 14 ACCGTCG 510 0.0 14.430029 8 >>END_MODULE