##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063014_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 736447 Sequences flagged as poor quality 0 Sequence length 38 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.172947951447966 32.0 32.0 32.0 32.0 32.0 2 31.330966111614277 32.0 32.0 32.0 32.0 32.0 3 31.395895427641094 32.0 32.0 32.0 32.0 32.0 4 31.49695361648564 32.0 32.0 32.0 32.0 32.0 5 31.417511375564025 32.0 32.0 32.0 32.0 32.0 6 34.95171818202803 36.0 36.0 36.0 36.0 36.0 7 34.9667009302774 36.0 36.0 36.0 36.0 36.0 8 34.923846522560346 36.0 36.0 36.0 36.0 36.0 9 35.01233761560574 36.0 36.0 36.0 36.0 36.0 10 34.87879236387683 36.0 36.0 36.0 32.0 36.0 11 35.039857586492985 36.0 36.0 36.0 36.0 36.0 12 34.949957023383895 36.0 36.0 36.0 36.0 36.0 13 34.99297301774602 36.0 36.0 36.0 36.0 36.0 14 34.94182744990474 36.0 36.0 36.0 32.0 36.0 15 34.9229856323673 36.0 36.0 36.0 32.0 36.0 16 34.92546374688199 36.0 36.0 36.0 36.0 36.0 17 34.90240438212118 36.0 36.0 36.0 32.0 36.0 18 34.89470253799662 36.0 36.0 36.0 32.0 36.0 19 34.87964782258601 36.0 36.0 36.0 32.0 36.0 20 34.86925060459205 36.0 36.0 36.0 32.0 36.0 21 34.85533378505174 36.0 36.0 36.0 32.0 36.0 22 34.839745426351115 36.0 36.0 36.0 32.0 36.0 23 34.786383813091774 36.0 36.0 36.0 32.0 36.0 24 34.76630904871634 36.0 36.0 36.0 32.0 36.0 25 34.740170032602485 36.0 36.0 36.0 32.0 36.0 26 34.69092141050204 36.0 36.0 36.0 32.0 36.0 27 34.67595224096235 36.0 36.0 36.0 32.0 36.0 28 34.62823393944167 36.0 36.0 36.0 32.0 36.0 29 34.59510731933187 36.0 36.0 36.0 32.0 36.0 30 34.55857515883696 36.0 36.0 36.0 32.0 36.0 31 34.555037904968046 36.0 36.0 36.0 32.0 36.0 32 34.50967822531696 36.0 36.0 36.0 32.0 36.0 33 34.47502535824031 36.0 36.0 36.0 32.0 36.0 34 34.46153898379652 36.0 36.0 36.0 32.0 36.0 35 34.42588536581723 36.0 36.0 36.0 32.0 36.0 36 34.38945097203193 36.0 36.0 36.0 32.0 36.0 37 34.3619839581124 36.0 36.0 36.0 32.0 36.0 38 33.95420308589756 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 3.0 21 25.0 22 59.0 23 168.0 24 442.0 25 1073.0 26 2440.0 27 4699.0 28 8341.0 29 13342.0 30 20357.0 31 29703.0 32 42178.0 33 66965.0 34 163402.0 35 383246.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.71857053424355 18.803835483244544 12.430148821204067 26.04744516130785 2 14.784499088189646 21.21374654252105 38.7778075000645 25.223946869224807 3 17.926476718623334 25.53707191420428 29.48155128610749 27.054900081064897 4 11.589731751861985 16.779121319311013 36.88910916633286 34.74203776249414 5 13.084598191856564 38.08412293637279 33.917082854683166 14.914196017087471 6 32.785883535090875 36.78889801682407 17.215270658365526 13.20994778971953 7 28.627993596280522 31.38134855597212 21.620972045510403 18.36968580223696 8 26.99868012970577 34.75481915604343 19.82317540152844 18.423325312722355 9 27.3608938426107 14.040841046365099 19.022943553643593 39.57532155738061 10 15.561119877029702 27.69642522520565 32.525752337603436 24.216702560161206 11 36.685791106795854 21.150997073621173 23.268174442052945 18.895037377530027 12 24.468086550930483 24.296586982055686 30.01323927788226 21.22208718913157 13 30.047145343989918 20.141327402144896 25.464053033080496 24.347474220784687 14 22.731469788687832 20.858012671669073 26.19866222370683 30.211855315936265 15 24.183953495635123 28.977781157367737 23.178450044606063 23.659815302391074 16 23.994394708648418 26.109278739678484 26.089318036464267 23.80700851520883 17 22.702652057785556 26.726295307062152 26.828407203777054 23.74264543137524 18 23.59748902500791 24.96825976614746 28.89562996386705 22.538621244977573 19 24.941238133905088 25.127130669281023 26.7891647328321 23.14246646398179 20 25.014698953217273 24.909192379084985 26.94111049403419 23.134998173663547 21 25.847993873261238 24.639619577320204 25.660742704129575 23.851643845288983 22 24.811493051076454 25.640339740238577 26.362864843946255 23.18530236473871 23 23.073277705734984 25.33522530535206 27.005546917964 24.58595007094895 24 23.991271605424423 25.7145456495851 26.950479803706173 23.343702941284302 25 23.963875151742286 25.312107065555384 27.018274252287338 23.705743530414995 26 22.955111440621582 26.405737827349192 27.662177539154264 22.97697319287497 27 23.984514818465986 25.781931058081653 26.691977415859412 23.541576707592952 28 22.964313793117494 25.902746565604858 27.093463616526375 24.039476024751274 29 23.327544276777555 25.445551411031612 26.947628274675573 24.27927603751526 30 23.035873593075944 25.673809520576498 27.580667719469286 23.70964916687827 31 23.97769289575489 25.423418114270273 26.412491326599195 24.18639766337564 32 23.206286399428606 26.187899468665087 26.479162791076615 24.126651340829685 33 22.9203187737882 25.586634204498083 27.428721958267193 24.06432506344652 34 23.653161734653004 25.970775901049226 27.33855932606148 23.037503038236288 35 24.099222347297225 25.960320294603683 27.070922958474945 22.869534399624143 36 22.966893747954707 26.319205591169492 27.037926693977976 23.67597396689782 37 23.93709255384298 26.18586266221466 26.302775352469354 23.574269431473006 38 23.45450521218771 26.394160068545325 26.575164268440226 23.576170450826737 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 373.0 1 287.0 2 201.0 3 201.0 4 627.5 5 1054.0 6 1054.0 7 1218.0 8 1382.0 9 1269.0 10 1156.0 11 1156.0 12 1512.0 13 1868.0 14 2332.5 15 2797.0 16 2797.0 17 4290.5 18 5784.0 19 5784.0 20 6538.0 21 7292.0 22 7484.5 23 7677.0 24 7677.0 25 8983.5 26 10290.0 27 10290.0 28 13391.5 29 16493.0 30 20675.0 31 24857.0 32 24857.0 33 30063.5 34 35270.0 35 35270.0 36 38169.5 37 41069.0 38 44590.0 39 48111.0 40 48111.0 41 48889.5 42 49668.0 43 52828.5 44 55989.0 45 55989.0 46 58219.5 47 60450.0 48 60450.0 49 62685.5 50 64921.0 51 63722.0 52 62523.0 53 62523.0 54 58848.5 55 55174.0 56 55174.0 57 52950.0 58 50726.0 59 44981.5 60 39237.0 61 39237.0 62 36782.5 63 34328.0 64 28190.0 65 22052.0 66 22052.0 67 18241.0 68 14430.0 69 14430.0 70 11595.0 71 8760.0 72 6828.0 73 4896.0 74 4896.0 75 3652.5 76 2409.0 77 2409.0 78 2339.0 79 2269.0 80 1739.5 81 1210.0 82 1210.0 83 1180.5 84 1151.0 85 1151.0 86 718.5 87 286.0 88 255.0 89 224.0 90 224.0 91 131.5 92 39.0 93 30.0 94 21.0 95 21.0 96 12.0 97 3.0 98 3.0 99 5.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008147225801720965 2 0.0 3 0.0 4 2.7157419339069887E-4 5 1.3578709669534943E-4 6 2.7157419339069887E-4 7 0.0 8 0.0014936580636488437 9 0.004209399997555832 10 0.0012220838702581447 11 0.0057030580612046754 12 2.7157419339069887E-4 13 1.3578709669534943E-4 14 1.3578709669534943E-4 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 4.073612900860483E-4 22 2.7157419339069887E-4 23 2.7157419339069887E-4 24 0.0 25 1.3578709669534943E-4 26 1.3578709669534943E-4 27 1.3578709669534943E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 736447.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.43713099965334 #Duplication Level Percentage of deduplicated Percentage of total 1 82.50361369187938 50.68785322332787 2 11.863102883039188 14.576700117752878 3 2.8127611682226017 5.184239290884898 4 1.020494591634872 2.507850396428375 5 0.4696773193965135 1.4427813499664812 6 0.2755882255080427 1.0158809947499774 7 0.17123261994040573 0.7364028631884793 8 0.11056038497469532 0.5434010284049969 9 0.08022841088363954 0.443610305041696 >10 0.5271038003580163 6.429249354562167 >50 0.07971023000204411 3.43742554542854 >100 0.0792656916681964 9.363765885658658 >500 0.005772851493436213 2.3172060353498374 >1k 8.881309989901866E-4 1.31363360925525 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3769 0.511781567444772 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2904 0.39432572880329475 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1725 0.23423274179947776 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1232 0.1672897031286705 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 935 0.12696093541015172 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 927 0.12587463863658893 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 808 0.10971597412984234 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 740 0.10048245155455857 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.3578709669534943E-4 0.0 5 0.0 0.0 0.0 1.3578709669534943E-4 0.0 6 0.0 0.0 0.0 1.3578709669534943E-4 0.0 7 0.0 0.0 0.0 1.3578709669534943E-4 0.0 8 0.0 0.0 0.0 1.3578709669534943E-4 0.0 9 0.0 0.0 0.0 1.3578709669534943E-4 0.0 10 0.0 0.0 0.0 1.3578709669534943E-4 0.0 11 0.0 0.0 0.0 1.3578709669534943E-4 0.0 12 0.0 0.0 0.0 1.3578709669534943E-4 0.0 13 0.0 0.0 0.0 1.3578709669534943E-4 0.0 14 0.0 0.0 0.0 1.3578709669534943E-4 0.0 15 0.0 0.0 0.0 1.3578709669534943E-4 1.3578709669534943E-4 16 0.0 0.0 0.0 1.3578709669534943E-4 1.3578709669534943E-4 17 0.0 0.0 0.0 2.7157419339069887E-4 1.3578709669534943E-4 18 0.0 0.0 0.0 2.7157419339069887E-4 1.3578709669534943E-4 19 0.0 0.0 0.0 4.073612900860483E-4 1.3578709669534943E-4 20 0.0 0.0 0.0 4.073612900860483E-4 1.3578709669534943E-4 21 0.0 0.0 0.0 6.789354834767471E-4 4.073612900860483E-4 22 0.0 0.0 0.0 0.0010862967735627955 4.073612900860483E-4 23 0.0 0.0 0.0 0.0020368064504302412 4.073612900860483E-4 24 0.0 0.0 0.0 0.0033946774173837357 5.431483867813977E-4 25 0.0 0.0 0.0 0.003937825804165134 5.431483867813977E-4 26 0.0 0.0 0.0 0.005295696771118628 5.431483867813977E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTAGC 55 5.8286936E-5 20.364069 2 CGGTCCA 210 0.0 19.8086 10 CCGGTCC 240 0.0 18.668331 9 GGTCCAA 255 0.0 18.195229 11 GTCTAGC 45 0.008839341 17.78057 1 GTAATGT 45 0.008839341 17.78057 3 TATTGGG 45 0.00884626 17.778154 2 CGAAGAT 45 0.0088497205 17.776947 30 TCGAACT 55 0.0013644416 17.453732 19 AACGAAT 120 1.6570993E-9 17.332525 31 CCTCGCC 205 0.0 17.16993 30 TCCCCGC 95 7.670551E-7 16.84475 1 TCCTCGC 190 0.0 16.84132 29 CGAGCCG 210 0.0 16.761122 15 AGGCCCG 225 0.0 16.354792 10 GCCGGTC 235 0.0 16.341883 8 AGGACCT 425 0.0 16.190777 5 TAGTACC 130 4.780304E-9 16.002514 4 AACCGCG 80 5.6121782E-5 16.001427 7 CCTAAGT 80 5.6154393E-5 16.000341 2 >>END_MODULE