##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063005_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1970862 Sequences flagged as poor quality 0 Sequence length 38 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.392057891420098 32.0 32.0 32.0 32.0 32.0 2 31.154435977759984 32.0 32.0 32.0 32.0 32.0 3 31.176088432371216 32.0 32.0 32.0 32.0 32.0 4 31.227348743849138 32.0 32.0 32.0 32.0 32.0 5 31.213711056380408 32.0 32.0 32.0 32.0 32.0 6 34.884436353230214 36.0 36.0 36.0 36.0 36.0 7 34.825564144014145 36.0 36.0 36.0 32.0 36.0 8 34.812687544840784 36.0 36.0 36.0 32.0 36.0 9 34.91414924028167 36.0 36.0 36.0 36.0 36.0 10 34.70645687014108 36.0 36.0 36.0 32.0 36.0 11 34.87228126576087 36.0 36.0 36.0 36.0 36.0 12 34.736641124543475 36.0 36.0 36.0 32.0 36.0 13 34.78720326435844 36.0 36.0 36.0 32.0 36.0 14 34.749772434599684 36.0 36.0 36.0 32.0 36.0 15 34.69882213975408 36.0 36.0 36.0 32.0 36.0 16 34.75634519311854 36.0 36.0 36.0 32.0 36.0 17 34.7012205826689 36.0 36.0 36.0 32.0 36.0 18 34.74821474055515 36.0 36.0 36.0 32.0 36.0 19 34.65110697755601 36.0 36.0 36.0 32.0 36.0 20 34.61365889646256 36.0 36.0 36.0 32.0 36.0 21 34.57192893261933 36.0 36.0 36.0 32.0 36.0 22 34.53634551784955 36.0 36.0 36.0 32.0 36.0 23 34.540925239818925 36.0 36.0 36.0 32.0 36.0 24 34.49251292074229 36.0 36.0 36.0 32.0 36.0 25 34.45599083040822 36.0 36.0 36.0 32.0 36.0 26 34.479357255860634 36.0 36.0 36.0 32.0 36.0 27 34.42701924335646 36.0 36.0 36.0 32.0 36.0 28 34.33753758507699 36.0 36.0 36.0 32.0 36.0 29 34.26861951775416 36.0 36.0 36.0 32.0 36.0 30 34.2018467046399 36.0 36.0 36.0 32.0 36.0 31 34.19176329951057 36.0 36.0 36.0 32.0 36.0 32 34.148883077556924 36.0 36.0 36.0 32.0 36.0 33 34.203508921476995 36.0 36.0 36.0 32.0 36.0 34 34.1768317619397 36.0 36.0 36.0 32.0 36.0 35 34.19037304489102 36.0 36.0 36.0 32.0 36.0 36 34.09702099893346 36.0 36.0 36.0 32.0 36.0 37 34.003930259957315 36.0 36.0 36.0 32.0 36.0 38 33.38555870476979 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 13.0 11 24.0 12 12.0 13 12.0 14 113.0 15 304.0 16 434.0 17 515.0 18 663.0 19 817.0 20 1123.0 21 1449.0 22 2143.0 23 3361.0 24 5233.0 25 8320.0 26 12869.0 27 19791.0 28 29371.0 29 41235.0 30 58226.0 31 80997.0 32 113062.0 33 176028.0 34 439719.0 35 975020.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.78315363477443 19.819558024353924 12.37387528583019 26.023413055041456 2 11.219371035337062 19.47780042594346 50.01601730173195 19.28681123698753 3 19.6181106178097 25.17675882195631 29.712887751741455 25.492242808492545 4 10.320598168474378 16.547663505877768 40.46034738910178 32.67139093654608 5 10.24258965253222 40.828745232408814 37.430379342205605 11.498285772853361 6 30.637210753708416 39.70449373495259 18.289321132198967 11.368974379140017 7 27.115800091533554 31.236484340354625 22.459563378866708 19.188152189245113 8 21.509808667185222 46.13820674132447 19.327663724294837 13.02432086719547 9 27.057680403478685 14.113584932466031 20.781993647443247 38.04674101661204 10 15.278285171519379 29.06772488705415 35.870504998843145 19.783484942583325 11 35.243732707132594 19.29347426232744 29.366250817550192 16.096542212989775 12 26.83882235402344 22.372797419136166 34.96922336112051 15.819156865719883 13 32.13133405528733 22.87130983904215 25.605685235499433 19.391670870171087 14 17.804144364674862 26.520899427404604 26.445696806578045 29.229259401342482 15 19.23739419671722 41.90464686901454 21.126145832170288 17.73181310209795 16 17.717257050762242 26.93406906798712 36.950825062746176 18.397848818504464 17 17.94795019840555 32.3761621023325 31.673432433762894 18.002455265499055 18 18.489614386364618 26.175095331484634 39.441178634584205 15.894111647566541 19 24.991804950723143 24.497818543848844 26.695766280239226 23.81461022518879 20 24.65749045540069 28.800333680409672 29.820910639006105 16.721265225183537 21 20.970936253797436 26.83016556750089 25.658928614015974 26.539969564685702 22 23.16425950555052 33.90831864747704 26.549880069030714 16.377541777941733 23 18.106781632292677 32.6803594299621 30.693477771079568 18.519381166665653 24 24.59666533372036 26.43521779463019 31.94478557494981 17.023331296699638 25 20.54771440576986 30.265321367601178 31.548690799770213 17.638273426858753 26 15.68211310198951 33.09283441098571 33.38316872935472 17.841883757670058 27 17.96672421019728 31.52451790801357 31.195139550673318 19.31361833111583 28 16.884561383390004 32.90057150743904 27.375881198709322 22.838985910461634 29 20.14649951412094 28.408016623914385 26.806620133914866 24.638863728049813 30 16.94791412434424 29.652938421546953 30.94911059096216 22.450036863146646 31 24.112407795395974 26.41634948671904 28.748453002481796 20.7227897154032 32 19.115118879926605 31.79860437361219 29.484941605335692 19.601335141125514 33 17.022598084536543 31.992522446361644 33.61347096308009 17.371408506021723 34 19.4244830664195 31.391735862633467 32.66306744456415 16.520713626382882 35 17.751350769813193 32.56254748056754 32.21650073101678 17.46960101860249 36 16.127265927144236 30.77687408242669 34.08691274673936 19.008947243689708 37 17.62160318916593 30.476913458962223 27.916720793719097 23.984762558152752 38 19.293193664144447 34.55406870067873 27.207583704088588 18.945153931088235 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 21.0 1 51.0 2 81.0 3 81.0 4 209.0 5 337.0 6 337.0 7 461.0 8 585.0 9 652.5 10 720.0 11 720.0 12 1083.5 13 1447.0 14 2162.5 15 2878.0 16 2878.0 17 4522.0 18 6166.0 19 6166.0 20 8895.5 21 11625.0 22 16972.5 23 22320.0 24 22320.0 25 37476.5 26 52633.0 27 52633.0 28 73351.5 29 94070.0 30 132038.0 31 170006.0 32 170006.0 33 212080.5 34 254155.0 35 254155.0 36 265306.0 37 276457.0 38 275233.5 39 274010.0 40 274010.0 41 234431.5 42 194853.0 43 161797.5 44 128742.0 45 128742.0 46 110695.0 47 92648.0 48 92648.0 49 85909.0 50 79170.0 51 74528.5 52 69887.0 53 69887.0 54 62311.5 55 54736.0 56 54736.0 57 51291.0 58 47846.0 59 41716.5 60 35587.0 61 35587.0 62 34916.0 63 34245.0 64 28649.0 65 23053.0 66 23053.0 67 19725.0 68 16397.0 69 16397.0 70 13097.5 71 9798.0 72 7621.0 73 5444.0 74 5444.0 75 4014.0 76 2584.0 77 2584.0 78 2686.0 79 2788.0 80 2214.5 81 1641.0 82 1641.0 83 1679.0 84 1717.0 85 1717.0 86 1142.0 87 567.0 88 513.0 89 459.0 90 459.0 91 326.5 92 194.0 93 179.5 94 165.0 95 165.0 96 158.5 97 152.0 98 152.0 99 415.0 100 678.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12547809029754492 2 0.05667570839561572 3 0.01212667350631348 4 0.0023340041058176574 5 1.522176590750646E-4 6 3.5517453784181745E-4 7 0.0 8 1.522176590750646E-4 9 1.0147843938337642E-4 10 3.044353181501292E-4 11 0.0017758726892090873 12 0.0024862217648927223 13 0.01440993839243945 14 0.009437494862654007 15 0.023340041058176574 16 0.011365585210938159 17 0.020447905535750346 18 0.005429096507010638 19 0.008118275150670113 20 0.005784271044852456 21 0.006342402461461026 22 0.00735718685529479 23 0.009437494862654007 24 0.01471437371058958 25 0.017555770013324118 26 0.01902720738438308 27 0.009133059544503877 28 0.005530574946394014 29 0.010503018476179458 30 0.002993613961809604 31 0.005530574946394014 32 0.00679905543868622 33 0.008321232029436866 34 0.01273554414261374 35 0.016185811081648536 36 0.015779897324115034 37 0.00964045174142076 38 0.005581314166085703 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1970862.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.69375356511192 #Duplication Level Percentage of deduplicated Percentage of total 1 82.48844858629573 40.991606360157846 2 10.857906800006944 10.791402895049961 3 2.7552668501910214 4.107586555785443 4 1.138590047474491 2.2632325292354576 5 0.618733746105738 1.5373601150698535 6 0.3804862639448578 1.1344674381231534 7 0.2553869757645116 0.8883796206166593 8 0.1828679594361524 0.7269916248940033 9 0.1497723130388157 0.6698473573524936 >10 0.9422371238738902 9.095201093882483 >50 0.10853223725512233 3.7737455494593926 >100 0.10291156582321237 10.484451477980924 >500 0.012197196543213997 4.290495420649129 >1k 0.005944852096692536 5.737604881040443 >5k 3.074923498289243E-4 0.9388307899733451 >10k+ 4.099897997718991E-4 2.568796290729477 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 14541 0.7377989935368382 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 12799 0.6494112728339173 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 12402 0.6292678026163171 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAG 10691 0.5424529977238386 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCA 6295 0.3194033879591772 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 6160 0.31255359330079935 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 5977 0.3032683160972204 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAA 4951 0.2512098766935483 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTA 4331 0.21975156048470162 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATG 4027 0.2043268376984284 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAAT 3823 0.193976036881324 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCAT 3692 0.18732919910171286 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 3393 0.17215817241389808 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCA 3018 0.153130965029515 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAA 2802 0.14217129357611036 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAAT 2790 0.14156242293981008 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACG 2733 0.13867028741738385 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAG 2704 0.13719885004632493 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTT 2669 0.13542297735711584 No Hit TTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGT 2659 0.13491558516019894 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTT 2465 0.1250721765400114 No Hit ACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAA 2449 0.12426034902494443 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAA 2446 0.12410813136586935 No Hit GACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAA 2336 0.11852681719978365 No Hit ACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTT 2219 0.11259032849585612 No Hit CCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 2208 0.11203219707924755 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTC 2198 0.11152480488233069 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2192 0.11122036956418055 No Hit CACTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAA 1997 0.10132622172430135 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.0147843938337641E-4 0.0 10 0.0 0.0 0.0 1.522176590750646E-4 0.0 11 0.0 0.0 0.0 1.522176590750646E-4 0.0 12 0.0 0.0 0.0 1.522176590750646E-4 0.0 13 0.0 0.0 0.0 1.522176590750646E-4 0.0 14 0.0 0.0 0.0 1.522176590750646E-4 0.0 15 0.0 0.0 0.0 1.522176590750646E-4 0.0 16 0.0 0.0 0.0 1.522176590750646E-4 0.0 17 0.0 0.0 0.0 4.0591375753350564E-4 0.0 18 0.0 0.0 0.0 4.0591375753350564E-4 0.0 19 0.0 0.0 0.0 4.566529772251938E-4 0.0 20 0.0 0.0 0.0 5.073921969168821E-4 0.0 21 0.0 0.0 0.0 6.088706363002584E-4 0.0 22 0.0 0.0 0.0 9.133059544503876E-4 0.0 23 0.0 0.0 0.0 0.0010655236135254523 0.0 24 0.0 0.0 0.0 0.0013192197119838934 0.0 25 0.0 0.0 0.0 0.001725133469517399 0.0 26 0.0 0.0 0.0 0.002232525666434281 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACC 3805 0.0 21.90065 4 AGTGCGG 45 3.5369472E-4 21.33428 10 GTATCAA 2965 0.0 19.713345 1 AGGACCT 6020 0.0 19.502241 5 CTAGCGG 255 0.0 19.44987 29 GGACCTG 5920 0.0 19.210732 6 GGTATCA 1205 0.0 19.003828 1 TGTAGGA 11310 0.0 18.88774 2 TAGCGGC 255 0.0 18.822933 30 AAGACGG 315 0.0 18.78781 5 GCATCGT 180 0.0 18.664654 27 GTCCTAT 660 0.0 18.440037 1 CTGTAGG 11270 0.0 18.386644 1 TAGGACA 2565 0.0 18.27066 4 GGACGTA 115 9.458745E-10 18.081793 6 CGGACCA 320 0.0 18.000343 9 GTAGGAC 11500 0.0 17.956156 3 ACCGTCG 205 0.0 17.949282 8 GTCCTAG 500 0.0 17.935362 1 GCGCAAG 295 0.0 17.913649 1 >>END_MODULE