##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063005_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1970862 Sequences flagged as poor quality 0 Sequence length 38 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.312529745867543 32.0 32.0 32.0 32.0 32.0 2 31.394986559180705 32.0 32.0 32.0 32.0 32.0 3 31.45729229139331 32.0 32.0 32.0 32.0 32.0 4 31.531893658713802 32.0 32.0 32.0 32.0 32.0 5 31.497805528748334 32.0 32.0 32.0 32.0 32.0 6 35.05512968437161 36.0 36.0 36.0 36.0 36.0 7 35.080069025634465 36.0 36.0 36.0 36.0 36.0 8 34.989996762837784 36.0 36.0 36.0 36.0 36.0 9 35.11744911617353 36.0 36.0 36.0 36.0 36.0 10 34.998208905544885 36.0 36.0 36.0 36.0 36.0 11 35.11986785477624 36.0 36.0 36.0 36.0 36.0 12 35.05729472687585 36.0 36.0 36.0 36.0 36.0 13 35.0852971948315 36.0 36.0 36.0 36.0 36.0 14 35.050815328521225 36.0 36.0 36.0 36.0 36.0 15 35.02169862730115 36.0 36.0 36.0 36.0 36.0 16 35.05284438991669 36.0 36.0 36.0 36.0 36.0 17 35.06004479258314 36.0 36.0 36.0 36.0 36.0 18 35.07123887923152 36.0 36.0 36.0 36.0 36.0 19 35.01530294865901 36.0 36.0 36.0 36.0 36.0 20 34.998814224435804 36.0 36.0 36.0 36.0 36.0 21 34.962349469419976 36.0 36.0 36.0 36.0 36.0 22 34.929427834115224 36.0 36.0 36.0 36.0 36.0 23 34.91486618545591 36.0 36.0 36.0 36.0 36.0 24 34.90366803966995 36.0 36.0 36.0 36.0 36.0 25 34.86738340888403 36.0 36.0 36.0 32.0 36.0 26 34.817438765372714 36.0 36.0 36.0 32.0 36.0 27 34.75142348880845 36.0 36.0 36.0 32.0 36.0 28 34.681354655983014 36.0 36.0 36.0 32.0 36.0 29 34.65050216605729 36.0 36.0 36.0 32.0 36.0 30 34.57554055027698 36.0 36.0 36.0 32.0 36.0 31 34.57637926957849 36.0 36.0 36.0 32.0 36.0 32 34.55303212502955 36.0 36.0 36.0 32.0 36.0 33 34.600675237535654 36.0 36.0 36.0 32.0 36.0 34 34.57424872974364 36.0 36.0 36.0 32.0 36.0 35 34.56672816260093 36.0 36.0 36.0 32.0 36.0 36 34.49448058768194 36.0 36.0 36.0 32.0 36.0 37 34.403693916672 36.0 36.0 36.0 32.0 36.0 38 34.02585011025632 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 8.0 21 16.0 22 88.0 23 288.0 24 848.0 25 2171.0 26 4873.0 27 10094.0 28 18804.0 29 31114.0 30 49309.0 31 73094.0 32 105719.0 33 170856.0 34 442077.0 35 1061502.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.39847403546376 21.073351032735776 12.87367660431281 26.65449832748766 2 10.691311720455314 20.496513708214984 48.93564338852745 19.876531182802246 3 19.17044420157271 25.920333336377688 30.08059417655828 24.828628285491323 4 10.094547749810234 17.442979091318698 40.66471624512394 31.797756913747122 5 9.954583301409892 41.591619094395796 36.706799718498665 11.746997885695642 6 31.087276068682673 39.79463797802077 17.78603361677967 11.332052336516883 7 27.218874264087685 31.39640551578428 22.508274336036223 18.87644588409181 8 21.60055611510974 46.23797768943305 19.05216877281734 13.109297422639873 9 26.492353281441865 14.10984483301028 20.74594830473214 38.65185358081572 10 15.275493786161556 29.543753612033026 35.20189076451041 19.978861837295007 11 34.84421793353447 19.323501623226704 29.6461375931998 16.18614285003902 12 26.792825046578745 22.499868077627184 34.71648867294211 15.990818202851958 13 31.994676424863105 22.827745913450805 25.675239591324782 19.502338070361304 14 17.864264469049584 26.7370318165351 26.28261136497634 29.116092349438976 15 19.262840320631277 41.93327589653664 20.93556017620716 17.86832360662492 16 17.839208345997005 27.3633198891246 36.199458003380244 18.598013761498148 17 18.084574160950893 32.973084873522346 30.889580295322556 18.052760670204204 18 18.704962600121167 26.49688308973434 38.84011158569194 15.958042724452548 19 25.31704401424351 24.68508703298354 26.78000793561396 23.217861017158988 20 25.02569941477384 29.08980943363868 29.221274751859845 16.66321639972763 21 21.19526501121338 26.79896085972621 25.718011426483873 26.28776270257654 22 23.478075560922644 33.58376546279289 26.478796058573415 16.45936291771105 23 18.098411960679055 32.88917821578216 30.252813749138703 18.759596074400083 24 24.86267430190445 26.687764034214474 31.261346558003556 17.18821510587753 25 20.70261641860262 30.72452561366549 30.84198690725175 17.730871060480137 26 15.852200712175687 33.43673986306499 32.67894961696963 18.032109807789688 27 18.264421757213476 31.845657147467172 30.62821845702813 19.261702638291222 28 17.066542457056862 33.07638992481463 27.431296559576467 22.425771058552044 29 20.147275659077092 28.223437257403106 26.916547175804297 24.71273990771551 30 17.092419459099624 29.451884505358567 30.944023478051736 22.511672557490073 31 23.88142853228689 26.484502720129566 28.879495368016634 20.75457337956691 32 19.243559417148433 31.824501157361603 29.323717236417362 19.6082221890726 33 17.15756861718375 32.19327380608079 33.048026701006975 17.601130875728487 34 19.72974262023419 31.599168282710817 31.988135140867296 16.6829539561877 35 18.016025475147423 32.93173240947362 31.38235959696823 17.669882518410727 36 16.335187344420866 30.907237543775263 33.626656762370985 19.13091834943289 37 17.814134119994197 30.542422554192022 27.587471877787483 24.055971448026295 38 19.53064192216401 34.2101070496057 27.30044011199161 18.95881091623868 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 22.5 2 39.0 3 39.0 4 120.5 5 202.0 6 202.0 7 333.5 8 465.0 9 544.0 10 623.0 11 623.0 12 945.0 13 1267.0 14 1981.5 15 2696.0 16 2696.0 17 4343.0 18 5990.0 19 5990.0 20 8485.5 21 10981.0 22 16207.5 23 21434.0 24 21434.0 25 36103.0 26 50772.0 27 50772.0 28 71189.5 29 91607.0 30 129380.0 31 167153.0 32 167153.0 33 209153.5 34 251154.0 35 251154.0 36 264039.0 37 276924.0 38 279081.5 39 281239.0 40 281239.0 41 239937.0 42 198635.0 43 164470.0 44 130305.0 45 130305.0 46 111753.5 47 93202.0 48 93202.0 49 86390.5 50 79579.0 51 74568.0 52 69557.0 53 69557.0 54 62216.0 55 54875.0 56 54875.0 57 51296.0 58 47717.0 59 41679.5 60 35642.0 61 35642.0 62 35189.5 63 34737.0 64 28958.0 65 23179.0 66 23179.0 67 19902.5 68 16626.0 69 16626.0 70 13256.0 71 9886.0 72 7541.0 73 5196.0 74 5196.0 75 3874.5 76 2553.0 77 2553.0 78 2668.0 79 2783.0 80 2181.0 81 1579.0 82 1579.0 83 1518.5 84 1458.0 85 1458.0 86 933.5 87 409.0 88 350.5 89 292.0 90 292.0 91 171.0 92 50.0 93 37.5 94 25.0 95 25.0 96 16.5 97 8.0 98 8.0 99 12.5 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008828624226353748 2 0.0 3 0.0 4 3.044353181501292E-4 5 5.073921969168821E-5 6 5.073921969168821E-5 7 4.566529772251938E-4 8 0.0023847433255093455 9 0.004160616014718433 10 9.640451741420759E-4 11 0.0048709650904020674 12 3.044353181501292E-4 13 3.044353181501292E-4 14 0.0 15 0.0 16 5.073921969168821E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.0147843938337642E-4 22 1.0147843938337642E-4 23 2.0295687876675285E-4 24 0.0 25 0.0 26 0.0 27 1.522176590750646E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1970862.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.203884431355654 #Duplication Level Percentage of deduplicated Percentage of total 1 81.52291753935019 39.297212955737734 2 11.430135518952197 11.019538631806103 3 2.984499051044193 4.3159334202607464 4 1.1813698455961485 2.2778646203122093 5 0.6183018433349553 1.4902275299906178 6 0.40483539784371414 1.1708783238828173 7 0.2677699798040921 0.9035287212464025 8 0.1949694929113358 0.7518629523150436 9 0.1627466047888752 0.7060516675954608 >10 0.9891470121171311 9.297139112668004 >50 0.11600411610451827 3.941122280925454 >100 0.10719804973734494 10.61312379121477 >500 0.01227496640091573 4.17174752917015 >1k 0.006984032607417571 6.262747669333652 >5k 4.232747034798528E-4 1.2301771126856578 >10k+ 4.232747034798528E-4 2.5508436808551798 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 15152 0.7688006567684597 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 11771 0.5972513549908618 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCA 11691 0.5931922174155269 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAG 11394 0.5781226691670954 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 6517 0.33066749473073204 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCA 6043 0.30661710459687186 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCA 5961 0.30245648858215335 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAA 5596 0.2839366733946872 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATG 4265 0.2164027719850502 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCAT 3909 0.1983396097748092 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTA 3742 0.18986616008629728 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAAT 3714 0.18844546193493 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 3613 0.1833208007460695 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCA 3125 0.15856006153652566 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAG 3119 0.15825562621837552 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAA 3016 0.15302948659013163 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACG 2929 0.14861517447695474 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTT 2907 0.1474989116437376 No Hit ACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAA 2822 0.14318607796994412 No Hit TTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGT 2745 0.13927915805368413 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTT 2723 0.13816289522046699 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAAT 2660 0.13496632437989062 No Hit GACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAA 2642 0.13405301842544023 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAA 2539 0.12882687879719634 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTC 2526 0.12816726894120442 No Hit ACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTT 2441 0.12385443526741091 No Hit CCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 2405 0.12202782335851013 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2127 0.10792232028422082 No Hit CACTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAA 2114 0.10726271042822885 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAA 2055 0.10426909646641927 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 5.0739219691688205E-5 0.0 8 0.0 0.0 0.0 1.0147843938337641E-4 0.0 9 0.0 0.0 0.0 1.0147843938337641E-4 0.0 10 0.0 0.0 0.0 2.0295687876675282E-4 0.0 11 0.0 0.0 0.0 2.0295687876675282E-4 0.0 12 0.0 0.0 0.0 2.0295687876675282E-4 0.0 13 0.0 0.0 0.0 2.0295687876675282E-4 0.0 14 0.0 0.0 0.0 2.0295687876675282E-4 0.0 15 0.0 0.0 0.0 2.0295687876675282E-4 0.0 16 0.0 0.0 0.0 2.0295687876675282E-4 0.0 17 0.0 0.0 0.0 3.044353181501292E-4 0.0 18 0.0 0.0 0.0 3.044353181501292E-4 0.0 19 0.0 0.0 0.0 3.5517453784181745E-4 0.0 20 0.0 0.0 0.0 3.5517453784181745E-4 0.0 21 0.0 0.0 0.0 4.0591375753350564E-4 0.0 22 0.0 0.0 0.0 4.0591375753350564E-4 0.0 23 0.0 0.0 0.0 5.073921969168821E-4 0.0 24 0.0 0.0 0.0 8.625667347586995E-4 0.0 25 0.0 0.0 0.0 0.0010655236135254523 0.0 26 0.0 0.0 0.0 0.0013699589316755816 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGAGGCG 35 0.0020652516 22.860588 5 TAGGACC 3870 0.0 21.996471 4 AAGACGG 310 0.0 21.680687 5 GCGCAAG 320 0.0 20.500488 1 GACGTTA 55 5.8281003E-5 20.367222 7 GGTATCA 1125 0.0 19.76936 1 GTATCAA 2920 0.0 19.726498 1 TCTAGGA 570 0.0 19.649591 2 AGGACCT 6490 0.0 19.380424 5 CAAGACG 340 0.0 19.295555 4 CTAGGAC 590 0.0 19.255672 3 GTGTAGG 375 0.0 19.200457 1 CTAGCGG 225 0.0 19.198996 29 GGACCTG 6495 0.0 18.971294 6 TAGAAAT 3030 0.0 18.694462 4 TGTAGGA 11375 0.0 18.623741 2 CGCAAGA 345 0.0 18.551167 2 TTTAGAA 3105 0.0 18.396572 2 AAATGTC 2915 0.0 18.281092 7 ATTTAGA 2980 0.0 18.255468 1 >>END_MODULE