##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062999_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1718330 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.223580453114362 32.0 32.0 32.0 32.0 32.0 2 30.81671681225376 32.0 32.0 32.0 32.0 32.0 3 30.866789266322535 32.0 32.0 32.0 32.0 32.0 4 30.936652447434426 32.0 32.0 32.0 32.0 32.0 5 30.850723085786782 32.0 32.0 32.0 32.0 32.0 6 34.51728829735848 36.0 36.0 36.0 32.0 36.0 7 34.42846310080136 36.0 36.0 36.0 32.0 36.0 8 34.41353232498996 36.0 36.0 36.0 32.0 36.0 9 34.54935256906415 36.0 36.0 36.0 32.0 36.0 10 34.252281575715955 36.0 36.0 36.0 32.0 36.0 11 34.556853456553746 36.0 36.0 36.0 32.0 36.0 12 34.35706819993831 36.0 36.0 36.0 32.0 36.0 13 34.4487898133653 36.0 36.0 36.0 32.0 36.0 14 34.34168407698172 36.0 36.0 36.0 32.0 36.0 15 34.28731500934047 36.0 36.0 36.0 32.0 36.0 16 34.30487682808308 36.0 36.0 36.0 32.0 36.0 17 34.22974283170287 36.0 36.0 36.0 32.0 36.0 18 34.25335354675761 36.0 36.0 36.0 32.0 36.0 19 34.249035982611026 36.0 36.0 36.0 32.0 36.0 20 34.227865427479 36.0 36.0 36.0 32.0 36.0 21 34.203439385915395 36.0 36.0 36.0 32.0 36.0 22 34.184437797163525 36.0 36.0 36.0 32.0 36.0 23 34.128963004777894 36.0 36.0 36.0 32.0 36.0 24 34.11123416340284 36.0 36.0 36.0 32.0 36.0 25 34.08863722335058 36.0 36.0 36.0 32.0 36.0 26 34.039229950009606 36.0 36.0 36.0 32.0 36.0 27 34.04998457804962 36.0 36.0 36.0 32.0 36.0 28 34.02460994104741 36.0 36.0 36.0 32.0 36.0 29 33.992985049437536 36.0 36.0 36.0 32.0 36.0 30 33.97118830492397 36.0 36.0 36.0 32.0 36.0 31 33.98682208888863 36.0 36.0 36.0 32.0 36.0 32 33.93561539401628 36.0 36.0 36.0 32.0 36.0 33 33.889206380613736 36.0 36.0 36.0 32.0 36.0 34 33.906850255771595 36.0 36.0 36.0 32.0 36.0 35 33.8559368689367 36.0 36.0 36.0 32.0 36.0 36 33.81019536410352 36.0 36.0 36.0 32.0 36.0 37 33.80757305057818 36.0 36.0 36.0 32.0 36.0 38 33.202759656177804 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 3.0 8 3.0 9 8.0 10 19.0 11 22.0 12 14.0 13 6.0 14 244.0 15 539.0 16 653.0 17 764.0 18 999.0 19 1215.0 20 1554.0 21 2317.0 22 3477.0 23 5248.0 24 7846.0 25 11795.0 26 17225.0 27 24527.0 28 34109.0 29 46339.0 30 61966.0 31 82793.0 32 113240.0 33 168175.0 34 370596.0 35 762632.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.216469196729 17.48528079380293 11.642229337031221 25.656020672436846 2 16.38824224031415 20.322673433476844 37.867313535211906 25.4217707909971 3 18.441684069368684 24.973226612281767 28.76381448603244 27.821274832317112 4 12.357946526728197 15.976159866936626 36.7908238417626 34.87506976457257 5 14.453651720539803 36.82971867403585 33.56904710221046 15.147582503213883 6 32.946134108662925 36.27886026084735 17.445497732382094 13.329507898107632 7 29.482305193010188 31.032823167158323 21.483487737214467 18.001383902617018 8 27.89917844316814 32.565123088034085 20.042622952727747 19.49307551607003 9 27.91356238571726 14.252708740949041 18.780080147771727 39.05364872556197 10 15.935497500176044 26.549055735220602 31.764553887195703 25.750892877407654 11 36.954217882768404 21.532674034840433 22.53500716700489 18.978100915386275 12 24.99364187180966 24.227931184392702 28.74502480106479 22.03340214273285 13 29.363786849445194 19.77553909265735 25.25697409654543 25.603699961352028 14 23.930530536939116 20.134794970215317 25.351290475594602 30.583384017250964 15 25.101562186210824 26.891350144041056 23.01292323883689 24.99416443091123 16 25.50678379339506 25.845638798723503 24.078494231258354 24.56908317662308 17 23.88142844669519 25.77863150848395 25.438633254751302 24.90130679006956 18 24.851780352654217 24.721122412812743 26.558656103064383 23.86844113146866 19 25.436344535981075 25.19597600970786 25.850034483862427 23.51764497044864 20 25.684311242306006 24.16896749201501 25.497839629757234 24.648881635921743 21 27.262685126931295 24.263755424967684 24.531941034085992 23.941618414015025 22 25.86966112171007 24.441944409200804 25.08575845158707 24.602636017502057 23 24.216690199620757 24.278558782137615 25.596190804338136 25.908560213903492 24 24.556492849231145 25.440334981115402 25.399184083042165 24.603988086611288 25 24.831914357374725 24.53389739252618 25.492557433747976 25.141630816351118 26 24.432677408727216 25.489906180623546 25.96651187265059 24.11090453799865 27 25.32290131604985 24.99598410403615 24.832205390380008 24.848909189533995 28 24.240129762120237 24.77696408087202 26.079881458787895 24.903024698219845 29 24.286281352692544 25.100488093339557 25.916324527941686 24.696906026026213 30 24.304488184897924 25.26557281260712 26.225202485993155 24.2047365165018 31 24.896302267178438 25.151974578268728 24.798235377994025 25.153487776558812 32 24.331962716905142 25.198797582360662 24.883992305923915 25.585247394810285 33 24.101143998547304 24.783841544328197 25.476025850549185 25.638988606575314 34 24.990600223732137 24.86703536294777 25.76621272246622 24.376151690853874 35 25.80573437481811 24.64343503719311 25.498236382896987 24.05259420509179 36 24.429470120811246 25.5413689457595 25.132766645014236 24.89639428841502 37 25.409520727612623 25.433383367274544 24.962416342532478 24.194679562580355 38 24.32133570166474 25.2080049911886 25.631813705748012 24.838845601398653 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 759.0 1 598.5 2 438.0 3 438.0 4 933.0 5 1428.0 6 1428.0 7 1696.0 8 1964.0 9 1883.5 10 1803.0 11 1803.0 12 2301.5 13 2800.0 14 3667.0 15 4534.0 16 4534.0 17 6717.0 18 8900.0 19 8900.0 20 10674.0 21 12448.0 22 13520.5 23 14593.0 24 14593.0 25 16739.0 26 18885.0 27 18885.0 28 24260.5 29 29636.0 30 35704.0 31 41772.0 32 41772.0 33 52078.5 34 62385.0 35 62385.0 36 68921.5 37 75458.0 38 85934.0 39 96410.0 40 96410.0 41 102827.5 42 109245.0 43 123347.0 44 137449.0 45 137449.0 46 142335.0 47 147221.0 48 147221.0 49 153673.5 50 160126.0 51 158808.0 52 157490.0 53 157490.0 54 149793.0 55 142096.0 56 142096.0 57 137093.5 58 132091.0 59 117411.0 60 102731.0 61 102731.0 62 97559.5 63 92388.0 64 76094.0 65 59800.0 66 59800.0 67 49636.5 68 39473.0 69 39473.0 70 31960.5 71 24448.0 72 19162.5 73 13877.0 74 13877.0 75 10570.5 76 7264.0 77 7264.0 78 6962.0 79 6660.0 80 5171.5 81 3683.0 82 3683.0 83 3776.0 84 3869.0 85 3869.0 86 2620.5 87 1372.0 88 1170.0 89 968.0 90 968.0 91 700.5 92 433.0 93 378.5 94 324.0 95 324.0 96 296.5 97 269.0 98 269.0 99 554.5 100 840.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11842893972636222 2 0.054005924356788276 3 0.011988384070580158 4 0.0029679979980562522 5 1.7458811753272071E-4 6 4.0737227424301505E-4 7 5.8196039177573576E-5 8 4.0737227424301505E-4 9 2.327841567102943E-4 10 5.237643525981622E-4 11 0.0022696455279253695 12 0.0033171742331216934 13 0.015014578107813982 14 0.00960234646429964 15 0.02426774833704818 16 0.011115443482916553 17 0.022114494887477958 18 0.005994192035290079 19 0.007856465288972433 20 0.006168780152822799 21 0.006808936583776108 22 0.0076818771714397115 23 0.010009718738542655 24 0.015305558303701849 25 0.017866184027515088 26 0.020252221633795604 27 0.009194974190056625 28 0.00634336827035552 29 0.012570344462355894 30 0.003666350468187135 31 0.00669254450542096 32 0.0072745048971966965 33 0.008496621719925742 34 0.011871991992225009 35 0.015712930577944866 36 0.016178498891365453 37 0.009485954385944493 38 0.0059359959961125044 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1718330.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.081621613709565 #Duplication Level Percentage of deduplicated Percentage of total 1 79.4279369562405 43.750195689812166 2 12.961330195716043 14.278621709015582 3 3.7042107535291775 6.121018053099843 4 1.4623258301660538 3.2218911221264115 5 0.691849836667637 1.9054105458416772 6 0.39732074571537074 1.313104258486258 7 0.2538575591179975 0.9788020210582211 8 0.16734170676075497 0.7373962057590598 9 0.12596797058771425 0.6244668082223435 >10 0.6460604865600653 6.3197103190558215 >50 0.06901443405336963 2.6916579665018516 >100 0.07626077555694429 9.274328539306135 >500 0.01175657163755265 4.468648487984888 >1k 0.004660262631101952 4.010506568899998 >5k 1.0591505979777161E-4 0.3042417048297086 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5215 0.3034923443110462 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3484 0.20275500049466633 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2331 0.135654967322924 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2244 0.13059191191447508 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2047 0.1191272921964931 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2032 0.11825435160882951 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2004 0.11662486251185744 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1981 0.11528635361077325 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1946 0.11324949223955817 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1898 0.11045608235903465 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1867 0.10865200514452987 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1842 0.10719710416509053 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1769 0.10294879330512766 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1761 0.10248322499170706 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.8196039177573576E-5 2 0.0 0.0 0.0 0.0 5.8196039177573576E-5 3 0.0 0.0 0.0 0.0 5.8196039177573576E-5 4 0.0 0.0 0.0 0.0 5.8196039177573576E-5 5 0.0 0.0 0.0 0.0 5.8196039177573576E-5 6 0.0 0.0 0.0 0.0 5.8196039177573576E-5 7 0.0 0.0 0.0 5.8196039177573576E-5 5.8196039177573576E-5 8 0.0 0.0 0.0 5.8196039177573576E-5 5.8196039177573576E-5 9 0.0 0.0 0.0 5.8196039177573576E-5 5.8196039177573576E-5 10 0.0 0.0 0.0 5.8196039177573576E-5 5.8196039177573576E-5 11 0.0 0.0 0.0 5.8196039177573576E-5 5.8196039177573576E-5 12 0.0 0.0 0.0 5.8196039177573576E-5 1.7458811753272071E-4 13 0.0 0.0 0.0 5.8196039177573576E-5 1.7458811753272071E-4 14 0.0 0.0 0.0 5.8196039177573576E-5 1.7458811753272071E-4 15 0.0 0.0 0.0 1.1639207835514715E-4 2.327841567102943E-4 16 0.0 0.0 0.0 1.1639207835514715E-4 2.327841567102943E-4 17 0.0 0.0 0.0 1.1639207835514715E-4 2.327841567102943E-4 18 0.0 0.0 0.0 2.327841567102943E-4 2.9098019588786787E-4 19 0.0 0.0 0.0 2.327841567102943E-4 2.9098019588786787E-4 20 0.0 0.0 0.0 2.9098019588786787E-4 3.4917623506544143E-4 21 0.0 0.0 0.0 5.237643525981622E-4 3.4917623506544143E-4 22 0.0 0.0 0.0 8.147445484860301E-4 4.0737227424301505E-4 23 0.0 0.0 0.0 0.0011639207835514715 4.0737227424301505E-4 24 0.0 0.0 0.0 0.0020368613712150752 4.0737227424301505E-4 25 0.0 0.0 0.0 0.0024442336454580903 4.0737227424301505E-4 26 0.0 0.0 0.0 0.003666350468187135 4.0737227424301505E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 545 0.0 18.201323 29 CATCGTT 570 0.0 17.682682 28 CGTACTA 75 3.239214E-5 17.064198 3 GCATCGT 560 0.0 16.854706 27 CGGCATC 605 0.0 16.660688 25 TACCGTC 520 0.0 16.614431 7 ATACCGT 520 0.0 16.30486 6 ACCGTCG 530 0.0 16.300953 8 CGTTTAT 610 0.0 16.261837 31 GGCATCG 600 0.0 15.999548 26 GTATTAC 155 1.8735591E-10 15.496514 1 CCGTCGT 540 0.0 15.4083185 9 TCGTTTA 635 0.0 15.369645 30 CGTCGTA 535 0.0 15.253238 10 GTATAGG 105 2.1678734E-6 15.250537 1 GTCTTAC 160 3.0195224E-10 15.012248 1 GTCCTAT 590 0.0 14.927432 1 GTCGTAG 555 0.0 14.703572 11 GTCTATA 120 5.370912E-7 14.678642 1 TAGACAG 265 0.0 14.487628 5 >>END_MODULE