##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062999_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1718330 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.204387399393596 32.0 32.0 32.0 32.0 32.0 2 31.316030680951854 32.0 32.0 32.0 32.0 32.0 3 31.397193205030465 32.0 32.0 32.0 32.0 32.0 4 31.48959163839309 32.0 32.0 32.0 32.0 32.0 5 31.421593640336837 32.0 32.0 32.0 32.0 32.0 6 34.9475799177108 36.0 36.0 36.0 36.0 36.0 7 34.96837394446934 36.0 36.0 36.0 36.0 36.0 8 34.91540099980795 36.0 36.0 36.0 36.0 36.0 9 35.01336879411987 36.0 36.0 36.0 36.0 36.0 10 34.87267404980417 36.0 36.0 36.0 32.0 36.0 11 35.04676109943957 36.0 36.0 36.0 36.0 36.0 12 34.93957563448232 36.0 36.0 36.0 36.0 36.0 13 34.9885155936287 36.0 36.0 36.0 36.0 36.0 14 34.93461733194439 36.0 36.0 36.0 32.0 36.0 15 34.91509547060227 36.0 36.0 36.0 32.0 36.0 16 34.922491605221346 36.0 36.0 36.0 32.0 36.0 17 34.88884149144809 36.0 36.0 36.0 32.0 36.0 18 34.887624030308494 36.0 36.0 36.0 32.0 36.0 19 34.88080811020002 36.0 36.0 36.0 32.0 36.0 20 34.861483533430714 36.0 36.0 36.0 32.0 36.0 21 34.85483929163781 36.0 36.0 36.0 32.0 36.0 22 34.833952151216586 36.0 36.0 36.0 32.0 36.0 23 34.77469752608638 36.0 36.0 36.0 32.0 36.0 24 34.76082708210879 36.0 36.0 36.0 32.0 36.0 25 34.734301909412046 36.0 36.0 36.0 32.0 36.0 26 34.67474408291772 36.0 36.0 36.0 32.0 36.0 27 34.65912601188363 36.0 36.0 36.0 32.0 36.0 28 34.62604447341314 36.0 36.0 36.0 32.0 36.0 29 34.59670610418255 36.0 36.0 36.0 32.0 36.0 30 34.572415659390224 36.0 36.0 36.0 32.0 36.0 31 34.56579004032986 36.0 36.0 36.0 32.0 36.0 32 34.52875524491803 36.0 36.0 36.0 32.0 36.0 33 34.48542596590876 36.0 36.0 36.0 32.0 36.0 34 34.48540617925544 36.0 36.0 36.0 32.0 36.0 35 34.44288989891348 36.0 36.0 36.0 32.0 36.0 36 34.40796296404067 36.0 36.0 36.0 32.0 36.0 37 34.403559851716494 36.0 36.0 36.0 32.0 36.0 38 33.975737489306475 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 30.0 22 105.0 23 403.0 24 1150.0 25 2778.0 26 5762.0 27 11233.0 28 19906.0 29 31340.0 30 47537.0 31 67626.0 32 96987.0 33 154524.0 34 379907.0 35 899032.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.56877957361612 18.729054750112038 12.349709283714649 26.3524563925572 2 15.454307379839726 21.29585120436703 37.146357218927676 26.103484196865562 3 17.486338479803067 25.58251325414792 29.165876170467836 27.765272095581174 4 11.861195139921064 16.874737389761897 36.67121372777925 34.59285374253779 5 13.887611809140271 37.38455360728149 33.32223728853015 15.405597295048098 6 32.995679521022765 36.69316917375495 17.104301390654168 13.206849914568114 7 29.186147881479723 31.218246638290147 21.477348250211545 18.11825723001859 8 27.708008517805272 32.895105171848876 19.891892080640964 19.504994229704884 9 27.724303294311415 13.973863170116369 18.73511943733941 39.56671409823281 10 15.661052656082685 26.911634619861257 31.726453745518878 25.700858978537177 11 36.97707091035435 21.419534015343483 22.56447533368175 19.03891974062042 12 24.65240819100949 24.325636099848516 28.825895946221987 22.196059762920008 13 29.42672112276716 19.70091821924361 25.305500818820175 25.566859839169055 14 23.859386730139146 20.050281377849423 25.446218130394044 30.644113761617387 15 25.15186256423388 26.97590102017657 22.818085001134822 25.054151414454733 16 25.46444830995694 25.937349599523724 23.941980843016676 24.65622124750266 17 23.814808564129127 25.816810507876838 25.446974678903356 24.921406249090687 18 24.82771062601479 24.660978973771044 26.647558967136696 23.863751433077464 19 25.353337251866638 25.201736569809057 25.95904162762682 23.48588455069748 20 25.659273829823142 24.029377360576838 25.628604517176562 24.682744292423457 21 27.19626287879846 24.255846380900504 24.56568245410655 23.98220828619449 22 25.679540995932676 24.447064560977555 25.243303232384484 24.630091210705285 23 24.115563635771093 24.123361923174066 25.84928587474088 25.91178856631396 24 24.547147521139713 25.290892901829103 25.617023505380228 24.544936071650962 25 24.69305936174039 24.420236171303632 25.71579714943995 25.17090731751603 26 24.396012407395553 25.349787293476805 26.088062246483506 24.166138052644136 27 25.3043943829183 24.829805683425185 25.008583915778694 24.85721601787782 28 24.214615353279058 24.640726752137248 26.21027392875641 24.934383965827287 29 24.36109478388901 24.915877625368818 25.999371482776883 24.72365610796529 30 24.338631112766464 24.986934989204634 26.378693266136306 24.295740631892592 31 24.857390605995356 24.826255725035352 25.06654717079956 25.249806498169736 32 24.422607997299703 25.08255108157339 25.079524887536152 25.415316033590752 33 24.131685997451015 24.483131878044382 25.75075800341029 25.63442412109432 34 24.8121140875152 24.69711871410032 26.042960316120883 24.447806882263592 35 25.821117014775975 24.47905815530195 25.682261265298283 24.017563564623792 36 24.51269546594659 25.230252629006074 25.41566520982582 24.841386695221523 37 25.41677093457019 25.122939132762625 25.106353261597015 24.353936671070166 38 24.345570609586407 24.888365382880696 25.818455022292007 24.947608985240894 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 424.0 1 340.0 2 256.0 3 256.0 4 815.0 5 1374.0 6 1374.0 7 1691.5 8 2009.0 9 1981.0 10 1953.0 11 1953.0 12 2417.0 13 2881.0 14 3767.0 15 4653.0 16 4653.0 17 7169.5 18 9686.0 19 9686.0 20 11369.5 21 13053.0 22 14022.0 23 14991.0 24 14991.0 25 16933.5 26 18876.0 27 18876.0 28 24174.0 29 29472.0 30 35419.5 31 41367.0 32 41367.0 33 52253.5 34 63140.0 35 63140.0 36 69499.0 37 75858.0 38 86311.0 39 96764.0 40 96764.0 41 102889.0 42 109014.0 43 123499.0 44 137984.0 45 137984.0 46 142356.5 47 146729.0 48 146729.0 49 153759.5 50 160790.0 51 159181.5 52 157573.0 53 157573.0 54 149943.0 55 142313.0 56 142313.0 57 137552.0 58 132791.0 59 117986.0 60 103181.0 61 103181.0 62 98209.5 63 93238.0 64 76011.0 65 58784.0 66 58784.0 67 49196.5 68 39609.0 69 39609.0 70 32035.0 71 24461.0 72 19025.5 73 13590.0 74 13590.0 75 10214.0 76 6838.0 77 6838.0 78 6573.5 79 6309.0 80 4895.0 81 3481.0 82 3481.0 83 3341.5 84 3202.0 85 3202.0 86 2040.0 87 878.0 88 751.5 89 625.0 90 625.0 91 366.5 92 108.0 93 73.5 94 39.0 95 39.0 96 28.5 97 18.0 98 18.0 99 18.0 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009311366268411772 2 0.0 3 0.0 4 2.327841567102943E-4 5 0.0 6 1.1639207835514715E-4 7 4.655683134205886E-4 8 0.002735213841345958 9 0.0037827425465422823 10 5.819603917757357E-4 11 0.004422898977495591 12 4.0737227424301505E-4 13 2.327841567102943E-4 14 0.0 15 0.0 16 5.8196039177573576E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.1639207835514715E-4 22 5.8196039177573576E-5 23 2.327841567102943E-4 24 0.0 25 5.8196039177573576E-5 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 5.8196039177573576E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1718330.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.12532765677275 #Duplication Level Percentage of deduplicated Percentage of total 1 78.02487349332215 41.45096969710981 2 13.743586756140225 14.602650991984637 3 4.042598530818401 6.442931146035469 4 1.5697615968786376 3.335763967087858 5 0.7539775286067373 2.002765162653833 6 0.4324280423213114 1.3783728861777877 7 0.26443885097386566 0.9833880422216978 8 0.18363050697732405 0.7804344680759707 9 0.13436437463243742 0.6424336284971041 >10 0.6798672772358434 6.483404057655916 >50 0.07021942684449482 2.6492546222452185 >100 0.08231613377657411 9.729627200247904 >500 0.012325140643350066 4.600510920964256 >1k 0.005502294930066994 4.560698132660787 >5k 1.1004589860133987E-4 0.35679507638190483 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 6103 0.35517042710073154 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 4455 0.2592633545360903 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2770 0.1612030285218788 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2443 0.14217292371081225 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2269 0.13204681289391446 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2148 0.12500509215342806 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2043 0.11889450803978283 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1978 0.11511176549324054 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1929 0.11226015957353941 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1917 0.11156180710340854 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1909 0.11109623878998796 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1891 0.11004871008479163 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1853 0.10783726059604383 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1822 0.10603318338153905 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1798 0.1046364784412773 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1639207835514715E-4 2 0.0 0.0 0.0 0.0 1.1639207835514715E-4 3 0.0 0.0 0.0 0.0 1.1639207835514715E-4 4 0.0 0.0 0.0 0.0 1.1639207835514715E-4 5 0.0 0.0 0.0 0.0 1.7458811753272071E-4 6 0.0 0.0 0.0 0.0 2.327841567102943E-4 7 0.0 0.0 0.0 0.0 2.327841567102943E-4 8 0.0 0.0 0.0 0.0 2.327841567102943E-4 9 0.0 0.0 0.0 0.0 2.327841567102943E-4 10 0.0 0.0 0.0 0.0 2.327841567102943E-4 11 0.0 0.0 0.0 0.0 2.327841567102943E-4 12 0.0 0.0 0.0 0.0 4.0737227424301505E-4 13 0.0 0.0 0.0 0.0 5.819603917757357E-4 14 0.0 0.0 0.0 0.0 5.819603917757357E-4 15 0.0 0.0 0.0 0.0 5.819603917757357E-4 16 0.0 0.0 0.0 0.0 5.819603917757357E-4 17 0.0 0.0 0.0 0.0 5.819603917757357E-4 18 0.0 0.0 0.0 1.1639207835514715E-4 6.401564309533093E-4 19 0.0 0.0 0.0 1.1639207835514715E-4 6.401564309533093E-4 20 0.0 0.0 0.0 2.327841567102943E-4 6.983524701308829E-4 21 0.0 0.0 0.0 4.655683134205886E-4 6.983524701308829E-4 22 0.0 0.0 0.0 7.565485093084564E-4 7.565485093084564E-4 23 0.0 0.0 0.0 0.0010475287051963243 8.147445484860301E-4 24 0.0 0.0 0.0 0.0019204692928599279 8.147445484860301E-4 25 0.0 0.0 0.0 0.0023860376062805164 8.147445484860301E-4 26 0.0 0.0 0.0 0.0034335663114768407 8.147445484860301E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATTA 60 1.1386704E-4 18.666513 32 ACCGTCG 435 0.0 17.65554 8 TACCGTC 435 0.0 17.65554 7 CGTCGTA 445 0.0 17.258787 10 ATACCGT 450 0.0 17.067024 6 GTATAAT 180 0.0 16.889734 1 CCGTCGT 450 0.0 16.71146 9 GTCGTAG 460 0.0 16.696001 11 ATCGTTT 480 0.0 15.999869 29 AACGAAT 60 0.0024427 15.999869 31 CATCGTT 480 0.0 15.999869 28 CGTTTAT 505 0.0 15.8414545 31 TCGTTTA 515 0.0 15.223177 30 GTATAGC 235 0.0 14.979472 1 ATAACGA 140 1.2798409E-8 14.857021 12 ATAGCAC 65 0.004162921 14.76911 3 TAAACGC 455 0.0 14.417464 28 TCCGAAA 540 0.0 14.222106 21 CGCTTCG 450 0.0 13.866554 32 GTCCTAT 520 0.0 13.846846 1 >>END_MODULE