##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062996_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 835256 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.256345359985442 32.0 32.0 32.0 32.0 32.0 2 30.91698952177536 32.0 32.0 32.0 32.0 32.0 3 30.973287231699025 32.0 32.0 32.0 32.0 32.0 4 31.028599614968346 32.0 32.0 32.0 32.0 32.0 5 30.962118200886913 32.0 32.0 32.0 32.0 32.0 6 34.600661354123766 36.0 36.0 36.0 32.0 36.0 7 34.5317806756252 36.0 36.0 36.0 32.0 36.0 8 34.523571216489316 36.0 36.0 36.0 32.0 36.0 9 34.639996599844835 36.0 36.0 36.0 32.0 36.0 10 34.40611620868333 36.0 36.0 36.0 32.0 36.0 11 34.64306631739251 36.0 36.0 36.0 32.0 36.0 12 34.47893460208607 36.0 36.0 36.0 32.0 36.0 13 34.5538972482688 36.0 36.0 36.0 32.0 36.0 14 34.45878149932476 36.0 36.0 36.0 32.0 36.0 15 34.401144080377755 36.0 36.0 36.0 32.0 36.0 16 34.417454050015806 36.0 36.0 36.0 32.0 36.0 17 34.35898694531976 36.0 36.0 36.0 32.0 36.0 18 34.3644678996619 36.0 36.0 36.0 32.0 36.0 19 34.35995072169491 36.0 36.0 36.0 32.0 36.0 20 34.327547482448495 36.0 36.0 36.0 32.0 36.0 21 34.29189613723218 36.0 36.0 36.0 32.0 36.0 22 34.27552151675654 36.0 36.0 36.0 32.0 36.0 23 34.2168664457364 36.0 36.0 36.0 32.0 36.0 24 34.21296464796422 36.0 36.0 36.0 32.0 36.0 25 34.166517810108516 36.0 36.0 36.0 32.0 36.0 26 34.12965246583084 36.0 36.0 36.0 32.0 36.0 27 34.10867686074688 36.0 36.0 36.0 32.0 36.0 28 34.08792394188129 36.0 36.0 36.0 32.0 36.0 29 34.051991245797694 36.0 36.0 36.0 32.0 36.0 30 34.01024715775762 36.0 36.0 36.0 32.0 36.0 31 34.02361072533451 36.0 36.0 36.0 32.0 36.0 32 33.96628219372264 36.0 36.0 36.0 32.0 36.0 33 33.93972147461377 36.0 36.0 36.0 32.0 36.0 34 33.92537377762027 36.0 36.0 36.0 32.0 36.0 35 33.87970274981563 36.0 36.0 36.0 32.0 36.0 36 33.825922830844675 36.0 36.0 36.0 32.0 36.0 37 33.809651172814085 36.0 36.0 36.0 32.0 36.0 38 33.190312910053926 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 3.0 9 4.0 10 13.0 11 5.0 12 4.0 13 3.0 14 78.0 15 201.0 16 267.0 17 351.0 18 382.0 19 598.0 20 758.0 21 1033.0 22 1389.0 23 2162.0 24 3300.0 25 4979.0 26 7320.0 27 10626.0 28 15569.0 29 21529.0 30 29234.0 31 39679.0 32 54323.0 33 82019.0 34 182008.0 35 377417.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.572510080500166 16.569297745132353 11.06661520537371 25.791576968993773 2 16.478714305223136 19.28602060887461 37.828976528116186 26.406288557786066 3 19.922385757870387 23.430592607848112 27.486840781841952 29.160180852439545 4 12.548010612620205 14.979550591931343 35.61333856940347 36.85910022604498 5 14.458339070104339 36.71525462283973 33.641462786813605 15.184943520242323 6 34.88068884517625 34.75449953487147 16.787129169245727 13.577682450706552 7 30.965835624048193 30.051624891051365 20.28515808327028 18.69738140163016 8 28.65251606399498 32.94067785449439 19.023577287360833 19.383228794149794 9 27.59744030266206 14.499524097431324 18.060233102465713 39.8428024974409 10 15.788547394735236 26.700836036113696 31.714059606034596 25.796556963116473 11 37.74120514874292 21.220545644149595 21.572902411662376 19.465346795445104 12 25.12562453081617 23.625673020627925 28.367018786509533 22.881683662046363 13 30.19380332285586 19.449184253854213 24.760604699895225 25.596407723394705 14 23.6762511883865 19.767686902963003 24.7538812643235 31.802180644326995 15 25.314207633913227 27.17125109426289 22.71324504183647 24.801296229987415 16 25.703858123180712 25.63105656848435 24.265548460330937 24.399536848004004 17 24.00184416781927 25.89379269877195 25.50017064539886 24.604192488009915 18 25.06106292594384 24.53616122528149 26.85834837955757 23.5444274692171 19 25.360578362185187 25.395420900254557 25.470733465359814 23.773267272200442 20 25.545559256607415 24.05537369581824 26.039813313729198 24.359253733845147 21 26.30110021946918 24.346112354330774 24.455906810010095 24.896880616189954 22 25.46456828674879 25.03651889882948 25.05483821529148 24.444074599130253 23 23.89070488643031 24.834345103392124 25.630111234838417 25.644838775339153 24 24.47334483654621 25.393681694684293 25.461335913373862 24.671637555395634 25 24.91686674130798 24.674382263308207 25.295382017830093 25.11336897755372 26 23.89169433863302 25.579315060455215 25.94993779046583 24.579052810445933 27 25.200678186903712 25.301615962297408 25.152903367945136 24.34480248285375 28 24.338963893851083 24.788195458834007 25.684383695480385 25.18845695183452 29 24.00238037365161 25.517294228791265 25.93350040650747 24.54682499104965 30 24.454339304571455 25.24789697638723 26.16573238859901 24.1320313304423 31 24.684088400171454 25.2415583296017 25.034662273318308 25.039690996908533 32 24.152711825037056 25.502338378867663 25.140745742905242 25.20420405319004 33 23.76059206611293 25.147124501752323 25.81955681250801 25.272726619626738 34 24.468288921298857 25.538775813222784 25.920391218654732 24.072544046823623 35 25.215959574187828 25.264216690016884 25.76798266096682 23.751841074828466 36 23.972966888749454 25.899866367150263 25.503877268525393 24.623289475574886 37 25.063071067053492 25.62487352859122 25.227828140172825 24.08422726418246 38 24.142749213061798 25.707047063035276 25.277089651687803 24.873114072215124 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 44.0 1 70.0 2 96.0 3 96.0 4 257.5 5 419.0 6 419.0 7 582.0 8 745.0 9 761.5 10 778.0 11 778.0 12 1001.0 13 1224.0 14 1589.0 15 1954.0 16 1954.0 17 2773.0 18 3592.0 19 3592.0 20 4305.5 21 5019.0 22 5293.0 23 5567.0 24 5567.0 25 6634.0 26 7701.0 27 7701.0 28 10182.0 29 12663.0 30 16124.0 31 19585.0 32 19585.0 33 24804.0 34 30023.0 35 30023.0 36 33366.0 37 36709.0 38 41762.0 39 46815.0 40 46815.0 41 50364.5 42 53914.0 43 59705.0 44 65496.0 45 65496.0 46 71895.0 47 78294.0 48 78294.0 49 78566.5 50 78839.0 51 77776.5 52 76714.0 53 76714.0 54 72847.5 55 68981.0 56 68981.0 57 66975.0 58 64969.0 59 58458.0 60 51947.0 61 51947.0 62 48111.0 63 44275.0 64 36783.5 65 29292.0 66 29292.0 67 24430.5 68 19569.0 69 19569.0 70 15525.0 71 11481.0 72 9138.0 73 6795.0 74 6795.0 75 5260.0 76 3725.0 77 3725.0 78 3327.0 79 2929.0 80 2354.5 81 1780.0 82 1780.0 83 1667.0 84 1554.0 85 1554.0 86 1060.0 87 566.0 88 483.5 89 401.0 90 401.0 91 288.0 92 175.0 93 152.0 94 129.0 95 129.0 96 119.0 97 109.0 98 109.0 99 248.5 100 388.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11637150765753254 2 0.05627017345580278 3 0.011972377331021867 4 0.002873370559445248 5 1.1972377331021867E-4 6 3.59171319930656E-4 7 0.0 8 3.59171319930656E-4 9 1.1972377331021867E-4 10 5.986188665510933E-4 11 0.0027536467861350293 12 0.0034719894259963415 13 0.015683814303638643 14 0.01077513959791968 15 0.026219506354937888 16 0.013049891290813836 17 0.022867240702251764 18 0.006225636212131371 19 0.008380664131715307 20 0.006943978851992683 21 0.007063702625302901 22 0.008620111678335743 23 0.010296244504678805 24 0.015204919210397771 25 0.018078289769843017 26 0.020951660329288267 27 0.010535692051299242 28 0.006225636212131371 29 0.011134310917850337 30 0.0035917131993065603 31 0.006465083758751807 32 0.007422873945233556 33 0.009458178091507273 34 0.014606300343846676 35 0.017479670903291923 36 0.015803538076948863 37 0.010415968277989024 38 0.006824255078682464 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 835256.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.54695914651921 #Duplication Level Percentage of deduplicated Percentage of total 1 80.21488121443414 48.567671358332355 2 12.7130511777336 15.394731805716885 3 3.6030240155562594 6.544564436214374 4 1.3266285784693927 3.2129330537276473 5 0.6673840212883633 2.020403653599312 6 0.3267290975080117 1.1869471991278007 7 0.21089360811089672 0.8938276672186748 8 0.1412879668555735 0.6843645405679335 9 0.09983072311872083 0.5440002042812997 >10 0.5491424505302908 6.372331063268384 >50 0.07060007679186107 3.0396422664512612 >100 0.07059781550598582 8.29633933942073 >500 0.004759403277539496 1.9412876897531128 >1k 0.001189850819384874 1.3009557223203227 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2583 0.3092465064602948 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2463 0.29487965366306856 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2028 0.24279981227312347 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1594 0.19083969465648853 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 1155 0.13828095817330255 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1012 0.12116045858994128 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 965 0.11553344124436102 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 956 0.11445592728456903 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1972377331021867E-4 2 0.0 0.0 0.0 0.0 1.1972377331021867E-4 3 0.0 0.0 0.0 0.0 1.1972377331021867E-4 4 0.0 0.0 0.0 1.1972377331021867E-4 1.1972377331021867E-4 5 0.0 0.0 0.0 1.1972377331021867E-4 1.1972377331021867E-4 6 0.0 0.0 0.0 1.1972377331021867E-4 1.1972377331021867E-4 7 0.0 0.0 0.0 2.3944754662043734E-4 1.1972377331021867E-4 8 0.0 0.0 0.0 2.3944754662043734E-4 1.1972377331021867E-4 9 0.0 0.0 0.0 2.3944754662043734E-4 1.1972377331021867E-4 10 0.0 0.0 0.0 2.3944754662043734E-4 2.3944754662043734E-4 11 0.0 0.0 0.0 3.59171319930656E-4 2.3944754662043734E-4 12 0.0 0.0 0.0 3.59171319930656E-4 3.59171319930656E-4 13 0.0 0.0 0.0 3.59171319930656E-4 3.59171319930656E-4 14 0.0 0.0 0.0 3.59171319930656E-4 3.59171319930656E-4 15 0.0 0.0 0.0 4.7889509324087467E-4 4.7889509324087467E-4 16 0.0 0.0 0.0 4.7889509324087467E-4 5.986188665510933E-4 17 0.0 0.0 0.0 4.7889509324087467E-4 7.18342639861312E-4 18 0.0 0.0 0.0 4.7889509324087467E-4 8.380664131715307E-4 19 0.0 0.0 0.0 5.986188665510933E-4 8.380664131715307E-4 20 0.0 0.0 0.0 7.18342639861312E-4 0.0011972377331021867 21 0.0 0.0 0.0 0.0011972377331021867 0.0011972377331021867 22 0.0 0.0 0.0 0.0016761328263430614 0.0011972377331021867 23 0.0 0.0 0.0 0.0022747516928941546 0.0011972377331021867 24 0.0 0.0 0.0 0.003112818106065685 0.0011972377331021867 25 0.0 0.0 0.0 0.003950884519237216 0.0011972377331021867 26 0.0 0.0 0.0 0.004190332065857653 0.0011972377331021867 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 140 0.0 19.426027 29 CTAGCGG 220 0.0 18.179436 29 GTAAACG 125 1.4733814E-10 17.917652 27 GTATTAG 170 0.0 17.897156 1 GTCGTAC 45 0.008806229 17.792494 1 CGCCGGT 240 0.0 17.331062 7 CGGTCCA 260 0.0 17.23264 10 TCTAGCG 235 0.0 17.019049 28 CGCTTCG 125 2.8539944E-9 16.637821 32 CGCGGTT 245 0.0 16.328302 10 GCCGGTC 255 0.0 16.311588 8 CCGGTCC 310 0.0 16.001738 9 CGAACGA 100 1.3118297E-6 16.001736 16 CATCGTT 170 3.6379788E-12 15.997906 28 TAGCGGC 250 0.0 15.997905 30 AAACGCT 130 4.802132E-9 15.997905 29 TAGGACA 150 1.1459633E-10 15.995989 4 AGGACCG 355 0.0 15.771638 5 ATACCGT 165 2.910383E-11 15.512191 6 CTTGCGC 290 0.0 15.446253 3 >>END_MODULE