##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062995_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3104370 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.251447797781836 32.0 32.0 32.0 32.0 32.0 2 30.787490859659126 32.0 32.0 32.0 32.0 32.0 3 30.836087515341276 32.0 32.0 32.0 32.0 32.0 4 30.92400261566759 32.0 32.0 32.0 32.0 32.0 5 30.784531805164978 32.0 32.0 32.0 32.0 32.0 6 34.4704787122669 36.0 36.0 36.0 32.0 36.0 7 34.406019256725195 36.0 36.0 36.0 32.0 36.0 8 34.38898520472753 36.0 36.0 36.0 32.0 36.0 9 34.56241008642655 36.0 36.0 36.0 32.0 36.0 10 34.22213460380045 36.0 36.0 36.0 32.0 36.0 11 34.54281802749028 36.0 36.0 36.0 32.0 36.0 12 34.33554827549551 36.0 36.0 36.0 32.0 36.0 13 34.43701588406021 36.0 36.0 36.0 32.0 36.0 14 34.32735981857833 36.0 36.0 36.0 32.0 36.0 15 34.244349417112005 36.0 36.0 36.0 32.0 36.0 16 34.280661454659075 36.0 36.0 36.0 32.0 36.0 17 34.1976996943019 36.0 36.0 36.0 32.0 36.0 18 34.220524937426916 36.0 36.0 36.0 32.0 36.0 19 34.21682950163801 36.0 36.0 36.0 32.0 36.0 20 34.20291363465051 36.0 36.0 36.0 32.0 36.0 21 34.19744134880829 36.0 36.0 36.0 32.0 36.0 22 34.17138324362109 36.0 36.0 36.0 32.0 36.0 23 34.10102855007618 36.0 36.0 36.0 32.0 36.0 24 34.08160915097105 36.0 36.0 36.0 32.0 36.0 25 34.06269613480352 36.0 36.0 36.0 32.0 36.0 26 34.01426118664979 36.0 36.0 36.0 32.0 36.0 27 34.02567477459195 36.0 36.0 36.0 32.0 36.0 28 34.002698454114686 36.0 36.0 36.0 32.0 36.0 29 33.97062302496159 36.0 36.0 36.0 32.0 36.0 30 33.945199186952586 36.0 36.0 36.0 32.0 36.0 31 33.96499901751402 36.0 36.0 36.0 32.0 36.0 32 33.91745378289315 36.0 36.0 36.0 32.0 36.0 33 33.87957170053827 36.0 36.0 36.0 32.0 36.0 34 33.900424240667185 36.0 36.0 36.0 32.0 36.0 35 33.86618251046106 36.0 36.0 36.0 32.0 36.0 36 33.81510966798417 36.0 36.0 36.0 32.0 36.0 37 33.82037740346673 36.0 36.0 36.0 32.0 36.0 38 33.218312894403695 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 7.0 8 6.0 9 7.0 10 31.0 11 25.0 12 17.0 13 15.0 14 300.0 15 621.0 16 894.0 17 1041.0 18 1275.0 19 1694.0 20 2347.0 21 3574.0 22 5579.0 23 8790.0 24 13952.0 25 20923.0 26 31092.0 27 44949.0 28 63025.0 29 85422.0 30 114893.0 31 156403.0 32 211796.0 33 317679.0 34 692126.0 35 1325887.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.3231275514186 17.135954611919917 11.359146212854666 26.18177162380681 2 17.0232857948594 19.661010394005316 37.154040770284425 26.161663040850858 3 18.861585785060704 24.032007711335236 28.212095224165452 28.894311279438607 4 12.929869519068 15.316377201191255 35.98033041424998 35.773422865490765 5 15.088119527258895 36.06862341807321 33.31066631060865 15.532590744059249 6 34.06585264893996 35.31725591950663 17.013711382879855 13.603180048673558 7 30.397149824279968 30.051830161997444 21.190805219738625 18.360214793983964 8 28.126556279913594 32.23755121026634 19.72894234492285 19.906950164897218 9 27.85939775026092 14.349946526820343 18.459328170701852 39.331327552216884 10 16.139982521351428 26.02811079517543 31.132997182349076 26.698909501124064 11 37.49187420070805 21.217210909992883 22.378209650453723 18.912705238845348 12 25.499476693449953 23.330452382325284 28.173220427542578 22.996850496682182 13 29.33377793242094 19.181647722879454 25.236700688162067 26.24787365653754 14 24.18684545907907 19.53384637786864 24.718113298480322 31.561194864571963 15 25.430930877714157 26.510763203087993 22.126638806816533 25.931667112381305 16 26.289541753636968 25.426405487835325 23.13509313218401 25.148959626343697 17 24.60706213642595 25.39047309129162 24.721698211992972 25.280766560289457 18 25.56298669900132 24.36667318471118 25.502939079692922 24.56740103659458 19 26.05844608111913 24.576032029627665 24.99792212042939 24.367599768823816 20 26.221160434624196 23.94466334149325 24.32447146590795 25.5097047579746 21 27.40257259317508 23.879423345853 24.025967541217767 24.69203651975415 22 26.383778340322912 23.79833293923675 24.440925136897558 25.376963583542782 23 24.74865338522203 23.597201103064354 25.1805687997732 26.473576711940417 24 25.267087701030594 24.627642968959158 24.64249504581753 25.46277428419272 25 25.2910739887559 24.089469529777535 24.75722087085394 25.86223561061263 26 25.141118613094005 24.91191363283128 25.16457394422013 24.78239380985459 27 25.893897816502164 24.2674693035216 24.269982107546724 25.568650772429514 28 24.995675204473432 24.25509625206938 25.20896735480043 25.54026118865676 29 25.054260299308734 24.499334572372142 25.05036212729368 25.396043001025443 30 24.89179441518731 24.685981529992823 25.382182512121986 25.040041542697878 31 25.723580912913864 24.40685468205478 24.05646002498539 25.813104380045964 32 25.326463027272904 24.421264230811357 24.011429749563494 26.24084299235225 33 24.933322294209194 23.95851823597803 24.819376626673467 26.28878284313931 34 25.73977555282215 24.126686301660254 24.835743248511104 25.297794897006494 35 26.42240472492341 23.982266072700597 24.845475712503156 24.749853489872837 36 25.123207939433595 24.731056004077452 24.423249596716904 25.72248645977205 37 26.1327701161571 24.43786742060107 24.38912499452332 25.04023746871851 38 25.172662512479153 24.194851002375188 24.929409630958542 25.703076854187117 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 231.0 1 253.5 2 276.0 3 276.0 4 613.5 5 951.0 6 951.0 7 1114.0 8 1277.0 9 1229.5 10 1182.0 11 1182.0 12 1709.0 13 2236.0 14 3169.5 15 4103.0 16 4103.0 17 6234.5 18 8366.0 19 8366.0 20 11046.0 21 13726.0 22 15599.0 23 17472.0 24 17472.0 25 21786.0 26 26100.0 27 26100.0 28 33296.0 29 40492.0 30 50417.0 31 60342.0 32 60342.0 33 79488.5 34 98635.0 35 98635.0 36 111458.0 37 124281.0 38 143803.0 39 163325.0 40 163325.0 41 176934.5 42 190544.0 43 217942.0 44 245340.0 45 245340.0 46 251256.0 47 257172.0 48 257172.0 49 276137.5 50 295103.0 51 300119.5 52 305136.0 53 305136.0 54 291124.0 55 277112.0 56 277112.0 57 268687.5 58 260263.0 59 233878.5 60 207494.0 61 207494.0 62 194509.0 63 181524.0 64 150013.0 65 118502.0 66 118502.0 67 98807.5 68 79113.0 69 79113.0 70 63709.5 71 48306.0 72 37672.0 73 27038.0 74 27038.0 75 20455.5 76 13873.0 77 13873.0 78 13161.5 79 12450.0 80 9743.0 81 7036.0 82 7036.0 83 7164.0 84 7292.0 85 7292.0 86 4879.0 87 2466.0 88 2199.5 89 1933.0 90 1933.0 91 1406.0 92 879.0 93 754.5 94 630.0 95 630.0 96 590.0 97 550.0 98 550.0 99 1084.5 100 1619.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11738291505200733 2 0.05218450120314267 3 0.01185425706342994 4 0.0027380756804118067 5 2.254885854456782E-4 6 4.831898259550247E-4 7 0.0 8 3.8655186076401975E-4 9 3.221265506366831E-4 10 3.5433920570035146E-4 11 0.001932759303820099 12 0.00228709850952045 13 0.014495694778650741 14 0.009212819348209137 15 0.02383736474711455 16 0.010984515376710895 17 0.02045503596542938 18 0.005379513395632608 19 0.00785988783553507 20 0.005508364015887281 21 0.0060237664969059745 22 0.007215634734261702 23 0.009341669968463811 24 0.01375480371218637 25 0.016750580633107522 26 0.01926316772807365 27 0.008632991557063107 28 0.005701639946269292 29 0.011306641927347578 30 0.0030279895759848215 31 0.005025174189932257 32 0.006120404462096979 33 0.008343077661490093 34 0.012498510164703306 35 0.015751988326133805 36 0.015172160534987777 37 0.009599371208973157 38 0.006217042427287984 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 3104370.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.72874022537843 #Duplication Level Percentage of deduplicated Percentage of total 1 80.10672933034994 41.43820191834375 2 11.501874102477085 11.8995491510409 3 3.46375148373411 5.375265021220527 4 1.4830077026102106 3.068564808022354 5 0.8275853916469065 2.140497486941045 6 0.5192652928853163 1.6116563666231747 7 0.36417423884679373 1.31867922186565 8 0.2685620229691263 1.111390009645764 9 0.19239253210015017 0.8957000982880304 >10 1.1212417867729123 10.294517480270276 >50 0.0702721788170864 2.4988452776736776 >100 0.06145402438797788 6.9391926077853 >500 0.011813947441515964 4.256503607645869 >1k 0.007875964960845354 7.1514369446338835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4875 0.15703669343538304 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3802 0.12247251455206691 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3780 0.12176383614066623 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3639 0.11722185177668899 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3505 0.11290535599815744 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 3474 0.11190676369118371 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3452 0.11119808527978302 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3354 0.10804124508354351 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3283 0.10575414657402306 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3180 0.10243624310246524 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3172 0.10217854186195588 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.663796519100494E-5 2 0.0 0.0 0.0 0.0 9.663796519100494E-5 3 0.0 0.0 0.0 0.0 9.663796519100494E-5 4 0.0 0.0 0.0 0.0 9.663796519100494E-5 5 0.0 0.0 0.0 0.0 1.2885062025467324E-4 6 0.0 0.0 0.0 0.0 1.9327593038200987E-4 7 0.0 0.0 0.0 0.0 1.9327593038200987E-4 8 0.0 0.0 0.0 0.0 1.9327593038200987E-4 9 0.0 0.0 0.0 3.221265506366831E-5 1.9327593038200987E-4 10 0.0 0.0 0.0 6.442531012733662E-5 1.9327593038200987E-4 11 0.0 0.0 0.0 6.442531012733662E-5 1.9327593038200987E-4 12 0.0 0.0 0.0 6.442531012733662E-5 4.509771708913564E-4 13 0.0 0.0 0.0 6.442531012733662E-5 4.8318982595502467E-4 14 0.0 0.0 0.0 6.442531012733662E-5 4.8318982595502467E-4 15 0.0 0.0 0.0 9.663796519100494E-5 6.12040446209698E-4 16 0.0 0.0 0.0 9.663796519100494E-5 6.442531012733662E-4 17 0.0 0.0 0.0 9.663796519100494E-5 6.442531012733662E-4 18 0.0 0.0 0.0 1.6106327531834156E-4 6.442531012733662E-4 19 0.0 0.0 0.0 1.9327593038200987E-4 6.442531012733662E-4 20 0.0 0.0 0.0 1.9327593038200987E-4 6.442531012733662E-4 21 0.0 0.0 0.0 2.254885854456782E-4 6.442531012733662E-4 22 0.0 0.0 0.0 3.5433920570035146E-4 6.442531012733662E-4 23 0.0 0.0 0.0 4.8318982595502467E-4 6.442531012733662E-4 24 0.0 0.0 0.0 7.731037215280395E-4 6.442531012733662E-4 25 0.0 0.0 0.0 9.019543417827128E-4 6.442531012733662E-4 26 0.0 0.0 0.0 0.0011596555822920593 6.764657563370346E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4650 0.0 19.633472 1 ACCGTCG 800 0.0 15.597495 8 TCTAGCG 820 0.0 15.413897 28 TAGTACG 85 9.414475E-5 15.063684 2 CGTCGTA 810 0.0 15.013563 10 CGCTTCG 725 0.0 14.785261 32 GTCCTAC 390 0.0 14.78472 1 CTAGCGG 845 0.0 14.768524 29 CCGTCGT 860 0.0 14.698629 9 ATACCGT 865 0.0 14.609428 6 AACGCTT 735 0.0 14.584102 30 AACGCAG 6175 0.0 14.506858 6 TAAACGC 740 0.0 14.2695875 28 TCAACGC 6315 0.0 14.261011 4 TATCAAC 6415 0.0 14.22127 2 AAACGCT 745 0.0 14.173819 29 TACCGTC 860 0.0 14.137265 7 GGTATCA 1825 0.0 14.129872 1 GTCCTAT 1135 0.0 14.111702 1 CAACGCA 6415 0.0 13.963672 5 >>END_MODULE