##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062995_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3104370 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.218322880326767 32.0 32.0 32.0 32.0 32.0 2 31.250730099827017 32.0 32.0 32.0 32.0 32.0 3 31.346120468887406 32.0 32.0 32.0 32.0 32.0 4 31.45759719363349 32.0 32.0 32.0 32.0 32.0 5 31.369508789222934 32.0 32.0 32.0 32.0 32.0 6 34.899663377754585 36.0 36.0 36.0 36.0 36.0 7 34.92635124034828 36.0 36.0 36.0 36.0 36.0 8 34.863064969704 36.0 36.0 36.0 32.0 36.0 9 34.9793339711439 36.0 36.0 36.0 36.0 36.0 10 34.811340143088614 36.0 36.0 36.0 32.0 36.0 11 35.00570163994627 36.0 36.0 36.0 36.0 36.0 12 34.89226026536785 36.0 36.0 36.0 32.0 36.0 13 34.951448119908385 36.0 36.0 36.0 36.0 36.0 14 34.897643966408644 36.0 36.0 36.0 32.0 36.0 15 34.864804775203986 36.0 36.0 36.0 32.0 36.0 16 34.88319079233467 36.0 36.0 36.0 32.0 36.0 17 34.84453979390343 36.0 36.0 36.0 32.0 36.0 18 34.84672091277779 36.0 36.0 36.0 32.0 36.0 19 34.84418899808979 36.0 36.0 36.0 32.0 36.0 20 34.827920318776435 36.0 36.0 36.0 32.0 36.0 21 34.824916166565195 36.0 36.0 36.0 32.0 36.0 22 34.80749298569436 36.0 36.0 36.0 32.0 36.0 23 34.75178184301485 36.0 36.0 36.0 32.0 36.0 24 34.729160828122936 36.0 36.0 36.0 32.0 36.0 25 34.7103705421712 36.0 36.0 36.0 32.0 36.0 26 34.641815891791246 36.0 36.0 36.0 32.0 36.0 27 34.62648975476506 36.0 36.0 36.0 32.0 36.0 28 34.59987308213905 36.0 36.0 36.0 32.0 36.0 29 34.56661190515306 36.0 36.0 36.0 32.0 36.0 30 34.54231454369163 36.0 36.0 36.0 32.0 36.0 31 34.547698566858976 36.0 36.0 36.0 32.0 36.0 32 34.52136568772408 36.0 36.0 36.0 32.0 36.0 33 34.49069086481315 36.0 36.0 36.0 32.0 36.0 34 34.488335797601444 36.0 36.0 36.0 32.0 36.0 35 34.4580323866034 36.0 36.0 36.0 32.0 36.0 36 34.43681584347227 36.0 36.0 36.0 32.0 36.0 37 34.434006577824164 36.0 36.0 36.0 32.0 36.0 38 33.98888341273753 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 11.0 21 52.0 22 225.0 23 773.0 24 2012.0 25 4961.0 26 10518.0 27 20697.0 28 35666.0 29 56544.0 30 86035.0 31 124882.0 32 181295.0 33 293310.0 34 717200.0 35 1570187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.582738765823144 18.3765737770036 12.113101575766324 26.927585881406934 2 15.944201238898714 20.740053537432715 36.3629657547264 26.95277946894217 3 17.832539291386013 24.926603465437434 28.43594674603865 28.804910497137904 4 12.3896350972068 16.29926416418709 35.933578601200054 35.377522137406054 5 14.522477529235427 36.677042372889545 32.92896748354818 15.87151261432685 6 34.086208962608765 35.76871140111147 16.65867791277054 13.486401723509228 7 30.16219124070662 30.272487726938884 21.099292607816103 18.46602842453839 8 28.07353522910742 32.46578625574524 19.48141099401219 19.979267521135142 9 27.69379448531129 14.204342104627358 18.229687960557364 39.872175449503985 10 15.867661360437763 26.312912346235386 31.18125952094794 26.63816677237892 11 37.6781522994782 21.14981319014788 22.244643270174272 18.92739124019965 12 25.294698614012944 23.414921861460567 28.098209033880757 23.19217049064573 13 29.324102448136667 19.199216843659613 25.185891718134584 26.29078899006913 14 24.043654590142282 19.47390291750017 24.65376227704816 31.828680215309387 15 25.39900205194613 26.637643064454302 21.921227173307305 26.042127710292267 16 26.26278602458602 25.49528631611092 23.05556110329774 25.186366556005318 17 24.544496951072198 25.5515289736726 24.515247860274386 25.388726214980817 18 25.618338020274646 24.454623643444563 25.39632840157584 24.530709934704948 19 26.01542341924448 24.604154788250113 24.949377812567445 24.431043979937957 20 26.16820804221146 23.94563148078354 24.326191787705717 25.55996868929928 21 27.381855103425305 23.944760379414028 23.92485293293381 24.74853158422686 22 26.25461084039945 23.92734240033965 24.424416040747733 25.393630718513165 23 24.67539286579426 23.569853831762213 25.168826633955767 26.585926668487758 24 25.21442353843131 24.597325705376612 24.661751015503953 25.526499740688124 25 25.32650768207893 24.046311519768274 24.85362560108853 25.773555197064262 26 25.223266056086135 24.82257258160115 25.0871352880844 24.867026074228313 27 25.887162108837074 24.239514361230075 24.21406632274233 25.65925720719052 28 24.951761549042157 24.256258113562495 25.17592941563023 25.616050921765126 29 25.068049233822 24.404243050924986 25.072494580220784 25.455213135032228 30 24.926474614817177 24.518565763745944 25.351810512277854 25.203149109159025 31 25.653417601638978 24.30296646340481 24.157687389067668 25.885928545888536 32 25.37542238843952 24.318428537835374 24.09103940574094 26.215109667984166 33 24.844976597506097 23.969211144290146 24.91094811507649 26.274864143127267 34 25.663532375328973 24.052029880458836 24.998276622954094 25.2861611212581 35 26.392085994903958 23.91084181331478 24.848745478148544 24.84832671363272 36 25.18040697468407 24.73451940329278 24.433041164551906 25.65203245747124 37 26.168594594072225 24.3732866894088 24.41216736407065 25.04595135244832 38 25.190980840228722 24.070914250206723 24.94236348836108 25.795741421203473 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 96.0 1 131.0 2 166.0 3 166.0 4 515.5 5 865.0 6 865.0 7 1048.0 8 1231.0 9 1147.5 10 1064.0 11 1064.0 12 1535.0 13 2006.0 14 2979.0 15 3952.0 16 3952.0 17 6259.5 18 8567.0 19 8567.0 20 11104.0 21 13641.0 22 15558.0 23 17475.0 24 17475.0 25 21824.0 26 26173.0 27 26173.0 28 33615.5 29 41058.0 30 50908.5 31 60759.0 32 60759.0 33 80064.0 34 99369.0 35 99369.0 36 112314.5 37 125260.0 38 144430.5 39 163601.0 40 163601.0 41 177377.5 42 191154.0 43 218828.0 44 246502.0 45 246502.0 46 251914.0 47 257326.0 48 257326.0 49 276519.0 50 295712.0 51 300128.5 52 304545.0 53 304545.0 54 290927.5 55 277310.0 56 277310.0 57 269096.5 58 260883.0 59 234340.5 60 207798.0 61 207798.0 62 195040.5 63 182283.0 64 150607.5 65 118932.0 66 118932.0 67 99408.5 68 79885.0 69 79885.0 70 64113.5 71 48342.0 72 37740.5 73 27139.0 74 27139.0 75 20064.0 76 12989.0 77 12989.0 78 12653.5 79 12318.0 80 9527.5 81 6737.0 82 6737.0 83 6412.0 84 6087.0 85 6087.0 86 3831.5 87 1576.0 88 1377.0 89 1178.0 90 1178.0 91 704.0 92 230.0 93 152.5 94 75.0 95 75.0 96 62.0 97 49.0 98 49.0 99 43.0 100 37.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009438307933654817 2 0.0 3 0.0 4 2.899138955730148E-4 5 9.663796519100494E-5 6 1.9327593038200987E-4 7 3.221265506366831E-4 8 0.0019971846139474354 9 0.0037044553323218564 10 9.985923069737177E-4 11 0.004638622329168237 12 3.8655186076401975E-4 13 2.899138955730148E-4 14 0.0 15 0.0 16 1.2885062025467327E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 1.2885062025467327E-4 22 3.221265506366832E-5 23 6.442531012733663E-5 24 0.0 25 6.442531012733663E-5 26 6.442531012733663E-5 27 1.6106327531834156E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 3.221265506366832E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 3104370.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.53792806619985 #Duplication Level Percentage of deduplicated Percentage of total 1 78.29347830778921 38.7849669646384 2 12.55668844174388 12.440646575535824 3 3.7248337341492856 5.535616367425255 4 1.6388699406238514 3.2474488491392624 5 0.9045586700809051 2.2404981165062634 6 0.5890933842320887 1.7509479415418059 7 0.4021014452004948 1.3943490727359977 8 0.2964452886222982 1.1748228306668207 9 0.22716611179301266 1.0128004654572513 >10 1.2067520820405546 10.661910804642144 >50 0.0744232518504264 2.5678930230365222 >100 0.0633915808904438 6.844481302312985 >500 0.013449231654872192 4.607195517127863 >1k 0.008683241796400152 7.570086796306826 >5k 6.528753230376055E-5 0.16633537292697267 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5143 0.16566968499244614 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3976 0.12807751653314522 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3975 0.12804530387808152 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3902 0.12569378005843376 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3662 0.11796274284315336 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3552 0.11441935078614984 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3474 0.11190676369118371 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3402 0.1095874525265996 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3355 0.1080734577386072 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 3241 0.104401215061349 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3228 0.10398245054552133 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 3128 0.10076118503915447 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.221265506366831E-5 2 0.0 0.0 0.0 0.0 3.221265506366831E-5 3 0.0 0.0 0.0 0.0 3.221265506366831E-5 4 0.0 0.0 0.0 0.0 3.221265506366831E-5 5 0.0 0.0 0.0 0.0 3.221265506366831E-5 6 0.0 0.0 0.0 0.0 6.442531012733662E-5 7 0.0 0.0 0.0 3.221265506366831E-5 6.442531012733662E-5 8 0.0 0.0 0.0 3.221265506366831E-5 6.442531012733662E-5 9 0.0 0.0 0.0 3.221265506366831E-5 6.442531012733662E-5 10 0.0 0.0 0.0 6.442531012733662E-5 6.442531012733662E-5 11 0.0 0.0 0.0 6.442531012733662E-5 6.442531012733662E-5 12 0.0 0.0 0.0 6.442531012733662E-5 1.6106327531834156E-4 13 0.0 0.0 0.0 6.442531012733662E-5 2.254885854456782E-4 14 0.0 0.0 0.0 9.663796519100494E-5 2.254885854456782E-4 15 0.0 0.0 0.0 1.2885062025467324E-4 3.5433920570035146E-4 16 0.0 0.0 0.0 1.2885062025467324E-4 3.8655186076401975E-4 17 3.221265506366831E-5 0.0 0.0 1.6106327531834156E-4 3.8655186076401975E-4 18 3.221265506366831E-5 0.0 0.0 2.254885854456782E-4 4.187645158276881E-4 19 3.221265506366831E-5 0.0 0.0 2.577012405093465E-4 4.8318982595502467E-4 20 3.221265506366831E-5 0.0 0.0 3.221265506366831E-4 5.15402481018693E-4 21 3.221265506366831E-5 0.0 0.0 3.5433920570035146E-4 5.15402481018693E-4 22 3.221265506366831E-5 0.0 0.0 4.8318982595502467E-4 5.476151360823613E-4 23 3.221265506366831E-5 0.0 0.0 6.442531012733662E-4 6.12040446209698E-4 24 3.221265506366831E-5 0.0 0.0 9.019543417827128E-4 6.442531012733662E-4 25 3.221265506366831E-5 0.0 0.0 9.663796519100493E-4 6.442531012733662E-4 26 3.221265506366831E-5 0.0 0.0 0.0012562935474830642 6.442531012733662E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGAACG 40 0.004483404 20.00136 9 GTATCAA 4140 0.0 19.286957 1 TACCGTC 830 0.0 15.03741 7 ATACCGT 910 0.0 14.946311 6 GGTATCA 1660 0.0 14.844861 1 TATTAGG 205 0.0 14.8290825 2 ACCGTCG 810 0.0 14.81606 8 GGACCGT 220 0.0 14.546678 6 GTTTTCG 1100 0.0 14.399587 28 TTTTCGG 1115 0.0 14.349364 29 TACACCG 145 2.0314474E-8 14.346033 5 CGTCGTA 830 0.0 14.073246 10 ATCGTTT 810 0.0 13.826763 29 CATCGTT 810 0.0 13.826763 28 TCTAGCG 830 0.0 13.686355 28 CGTTTAT 835 0.0 13.6044 31 CTAGCGG 865 0.0 13.502503 29 TATACCG 95 2.4273255E-4 13.474818 5 GTATTAG 610 0.0 13.378388 1 CGGCATC 885 0.0 13.378147 25 >>END_MODULE