##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062990_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 923682 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.152050164450536 32.0 32.0 32.0 32.0 32.0 2 30.76256980216135 32.0 32.0 32.0 32.0 32.0 3 30.8212350137818 32.0 32.0 32.0 32.0 32.0 4 30.87300174735461 32.0 32.0 32.0 32.0 32.0 5 30.809280683178844 32.0 32.0 32.0 32.0 32.0 6 34.44600306165975 36.0 36.0 36.0 32.0 36.0 7 34.337645423424945 36.0 36.0 36.0 32.0 36.0 8 34.34184816852553 36.0 36.0 36.0 32.0 36.0 9 34.45678166295327 36.0 36.0 36.0 32.0 36.0 10 34.18701457861039 36.0 36.0 36.0 32.0 36.0 11 34.465890858542224 36.0 36.0 36.0 32.0 36.0 12 34.29594709001583 36.0 36.0 36.0 32.0 36.0 13 34.36670845594046 36.0 36.0 36.0 32.0 36.0 14 34.271704980718475 36.0 36.0 36.0 32.0 36.0 15 34.21356917207437 36.0 36.0 36.0 32.0 36.0 16 34.23096909975511 36.0 36.0 36.0 32.0 36.0 17 34.153247546233445 36.0 36.0 36.0 32.0 36.0 18 34.1796072674362 36.0 36.0 36.0 32.0 36.0 19 34.16698928852137 36.0 36.0 36.0 32.0 36.0 20 34.133094506550954 36.0 36.0 36.0 32.0 36.0 21 34.12334872824197 36.0 36.0 36.0 32.0 36.0 22 34.10075978529407 36.0 36.0 36.0 32.0 36.0 23 34.04291845028917 36.0 36.0 36.0 32.0 36.0 24 34.03194281148707 36.0 36.0 36.0 32.0 36.0 25 34.01230726592052 36.0 36.0 36.0 32.0 36.0 26 33.97762649916313 36.0 36.0 36.0 32.0 36.0 27 33.97158545906492 36.0 36.0 36.0 32.0 36.0 28 33.95487841053523 36.0 36.0 36.0 32.0 36.0 29 33.91367591876858 36.0 36.0 36.0 32.0 36.0 30 33.88476012307266 36.0 36.0 36.0 32.0 36.0 31 33.90345703391427 36.0 36.0 36.0 32.0 36.0 32 33.85730803458333 36.0 36.0 36.0 32.0 36.0 33 33.81923973835151 36.0 36.0 36.0 32.0 36.0 34 33.81742417845103 36.0 36.0 36.0 32.0 36.0 35 33.76488012108063 36.0 36.0 36.0 32.0 36.0 36 33.7204600717563 36.0 36.0 36.0 27.0 36.0 37 33.72152104295634 36.0 36.0 36.0 27.0 36.0 38 33.118444443000946 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 10.0 11 10.0 12 4.0 13 5.0 14 236.0 15 426.0 16 520.0 17 544.0 18 701.0 19 839.0 20 1075.0 21 1450.0 22 2213.0 23 3219.0 24 4650.0 25 6719.0 26 9688.0 27 13727.0 28 19284.0 29 25763.0 30 34144.0 31 45628.0 32 61615.0 33 90518.0 34 198328.0 35 402362.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.52030185865063 17.454969969139917 11.575078234157244 25.449649938052204 2 16.436409328726022 20.166816512668305 37.65189510057736 25.744879058028314 3 18.958410254133693 24.405756364711245 28.530515857504962 28.105317523650104 4 12.616196108066442 15.695162907322437 36.132252986507936 35.55638799810318 5 14.546797000263078 36.65724422176054 33.48872608617044 15.30723269180594 6 33.5024397003721 35.721392388481284 17.228712572224765 13.547455338921853 7 29.857894816614376 31.002877613724205 20.910984516316223 18.2282430533452 8 28.19891282813006 32.419417526180574 19.871037728393244 19.510631917296124 9 27.740174648851013 14.559880998005806 18.85042687851447 38.84951747462871 10 15.920340377619954 26.674714186731336 31.449961025463363 25.954984410185343 11 36.689925459988196 21.695636404973666 22.560452111967 19.053986023071133 12 25.174333817999933 24.021310895038102 28.47208764273395 22.33226764422801 13 29.365154986552096 19.674759951665504 25.38210670836022 25.577978353422175 14 23.93247344379157 20.047054645536466 25.437767362092316 30.582704548579642 15 25.07769473494996 26.76164013314766 23.249296686685017 24.91136844521736 16 25.494673496544458 26.039504584831562 24.022914954595606 24.44290696402837 17 23.77278525284944 25.895438509865578 25.54926075836425 24.78251547892073 18 24.703778128085645 24.881338022069396 26.753728757773658 23.6611550920713 19 25.362869609467197 25.289245460746418 25.993980143134003 23.353904786652375 20 25.50943404397682 24.323127509817315 25.760185703474253 24.40725274273161 21 26.817860456656206 24.36687104209816 24.87746676959422 23.937801731651415 22 25.515416479901955 24.394178570887224 25.44861425994617 24.641790689264656 23 23.990346564401168 24.406973080600125 25.96434205383447 25.638338301164236 24 24.44200223047522 25.495847634721784 25.581060450209513 24.481089684593478 25 24.717419762804763 24.694356407877056 25.6453678929947 24.942855936323486 26 24.191395020221215 25.53384549583936 26.21806428559827 24.056695198341156 27 25.117556683272035 25.21879131266126 25.22214775491908 24.441504249147624 28 24.142489495286547 24.867452765329954 26.169160261705677 24.82089747767782 29 24.03881342315596 25.36904584028982 26.103889354459408 24.48825138209481 30 24.136769977469893 25.42231768856919 26.284221455460006 24.156690878500907 31 24.604252987929186 25.284284991982748 25.239678530325353 24.87178348976271 32 24.090972083878288 25.500636622694948 25.17171489697106 25.2366763964557 33 24.01863128080311 24.864552927215875 25.735485184190694 25.38133060779032 34 24.662830835062127 25.169017683515744 25.90832117041227 24.25983031100986 35 25.42978321623047 24.91253828987588 25.81449563476466 23.84318285912899 36 24.228066053313437 25.777293659189414 25.358586421845104 24.636053865652038 37 25.052403864893307 25.541470513081478 25.240256562393082 24.165869059632133 38 24.095501135191142 25.58656955738914 25.696461689870326 24.621467617549396 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1074.0 1 728.5 2 383.0 3 383.0 4 764.0 5 1145.0 6 1145.0 7 1269.5 8 1394.0 9 1335.0 10 1276.0 11 1276.0 12 1584.5 13 1893.0 14 2418.5 15 2944.0 16 2944.0 17 4200.5 18 5457.0 19 5457.0 20 6485.5 21 7514.0 22 7723.0 23 7932.0 24 7932.0 25 9211.0 26 10490.0 27 10490.0 28 13131.5 29 15773.0 30 19046.5 31 22320.0 32 22320.0 33 27509.5 34 32699.0 35 32699.0 36 36240.5 37 39782.0 38 44986.5 39 50191.0 40 50191.0 41 54220.0 42 58249.0 43 65602.0 44 72955.0 45 72955.0 46 75648.0 47 78341.0 48 78341.0 49 81620.0 50 84899.0 51 84777.5 52 84656.0 53 84656.0 54 80935.0 55 77214.0 56 77214.0 57 74518.0 58 71822.0 59 64388.5 60 56955.0 61 56955.0 62 53133.5 63 49312.0 64 40833.5 65 32355.0 66 32355.0 67 26786.5 68 21218.0 69 21218.0 70 17070.5 71 12923.0 72 10076.5 73 7230.0 74 7230.0 75 5496.0 76 3762.0 77 3762.0 78 3587.0 79 3412.0 80 2705.5 81 1999.0 82 1999.0 83 2017.5 84 2036.0 85 2036.0 86 1340.0 87 644.0 88 542.0 89 440.0 90 440.0 91 344.5 92 249.0 93 213.5 94 178.0 95 178.0 96 154.0 97 130.0 98 130.0 99 283.0 100 436.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12244473747458542 2 0.05543033208398561 3 0.012233647510723387 4 0.0030313462858429633 5 1.0826236735153439E-4 6 3.247871020546032E-4 7 0.0 8 1.0826236735153439E-4 9 0.0 10 2.1652473470306878E-4 11 0.001840460244976085 12 0.0024900344490852914 13 0.012774959347481058 14 0.00811967755136508 15 0.021219424000900742 16 0.010068400163692698 17 0.01818807771505778 18 0.0054131183675767205 19 0.007794890449310477 20 0.006387479673740529 21 0.0059544302043343916 22 0.006495742041092064 23 0.00790315281666201 24 0.012125385143371853 25 0.015048469061863284 26 0.015914568000675557 27 0.009202301224880425 28 0.0053048560002251855 29 0.00909403885752889 30 0.0031396086531944975 31 0.0053048560002251855 32 0.006279217306388995 33 0.008011415184013547 34 0.011908860408668783 35 0.014615419592457145 36 0.0135327959189418 37 0.009310563592231959 38 0.0053048560002251855 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 923682.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.439508642962956 #Duplication Level Percentage of deduplicated Percentage of total 1 81.86842666502884 47.843506276767314 2 11.243306146562464 13.141065734550311 3 3.1682813439206514 5.554584149441676 4 1.1892865528236194 2.780052871307821 5 0.6738057606854818 1.9688438787628726 6 0.3800948480762738 1.3327533695579459 7 0.26009622829446916 1.0639927046991688 8 0.18217539609185945 0.8516992507556337 9 0.1428513846292609 0.7513348254030825 >10 0.7216220988813005 7.842950739075934 >50 0.0802904521006799 3.316596854238564 >100 0.08177178903759068 9.594224045819274 >500 0.0068762640254806705 2.889812114366029 >1k 0.0011150698419698385 1.0685831852543355 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3313 0.3586732230356335 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2165 0.23438802531607197 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1239 0.1341370731485511 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1074 0.11627378253554796 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1038 0.11237633731089271 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1010 0.10934499102504974 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 982 0.10631364473920678 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 968 0.10479797159628532 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 941 0.10187488767779387 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 930 0.100684001636927 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 928 0.10046747690222392 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.247871020546032E-4 2 0.0 0.0 0.0 0.0 3.247871020546032E-4 3 0.0 0.0 0.0 0.0 3.247871020546032E-4 4 0.0 0.0 0.0 0.0 3.247871020546032E-4 5 0.0 0.0 0.0 0.0 3.247871020546032E-4 6 0.0 0.0 0.0 0.0 3.247871020546032E-4 7 0.0 0.0 0.0 0.0 3.247871020546032E-4 8 0.0 0.0 0.0 0.0 3.247871020546032E-4 9 0.0 0.0 0.0 0.0 3.247871020546032E-4 10 0.0 0.0 0.0 0.0 3.247871020546032E-4 11 0.0 0.0 0.0 0.0 3.247871020546032E-4 12 0.0 0.0 0.0 0.0 7.578365714607408E-4 13 0.0 0.0 0.0 0.0 8.660989388122752E-4 14 0.0 0.0 0.0 0.0 0.001082623673515344 15 0.0 0.0 0.0 1.082623673515344E-4 0.0012991484082184128 16 0.0 0.0 0.0 1.082623673515344E-4 0.0012991484082184128 17 0.0 0.0 0.0 2.165247347030688E-4 0.0012991484082184128 18 0.0 0.0 0.0 2.165247347030688E-4 0.0012991484082184128 19 0.0 0.0 0.0 3.247871020546032E-4 0.0012991484082184128 20 0.0 0.0 0.0 4.330494694061376E-4 0.0012991484082184128 21 0.0 0.0 0.0 7.578365714607408E-4 0.0014074107755699472 22 0.0 0.0 0.0 0.0011908860408668784 0.0014074107755699472 23 0.0 0.0 0.0 0.0020569849796791538 0.0014074107755699472 24 0.0 0.0 0.0 0.004222232326709842 0.0014074107755699472 25 0.0 0.0 0.0 0.005846167836982857 0.0014074107755699472 26 0.0 0.0 0.0 0.007037053877849736 0.0014074107755699472 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 175 0.0 21.0253 29 CTATATA 65 9.324647E-6 19.718063 1 TATACAC 140 0.0 19.42765 3 CATCGTT 195 0.0 18.868858 28 CGTTTAT 215 0.0 18.601757 31 GGCATCG 195 0.0 18.049452 26 GCATCGT 220 0.0 17.451828 27 GTAATAC 100 1.3143344E-6 15.999242 3 ACCGTGT 70 3.701323E-4 15.996644 8 CGGCATC 230 0.0 15.302794 25 CGCATCG 255 0.0 15.060557 13 ACAATAC 170 4.7293724E-11 15.05811 3 AAAGGCG 85 9.445871E-5 15.055665 5 CGGTCCA 235 0.0 14.979636 10 ATTTCGG 75 6.237259E-4 14.935052 14 TCTAGCG 225 0.0 14.931009 28 AAGACGG 215 0.0 14.880599 5 AACGAAT 65 0.0041650636 14.7669325 31 GGCCCGT 65 0.0041665626 14.766132 6 ATAATAC 100 2.3257537E-5 14.399318 3 >>END_MODULE