##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062989_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1609449 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27242491063712 32.0 32.0 32.0 32.0 32.0 2 30.938010461965554 32.0 32.0 32.0 32.0 32.0 3 30.976393163126016 32.0 32.0 32.0 32.0 32.0 4 31.032022760584525 32.0 32.0 32.0 32.0 32.0 5 30.963279979670062 32.0 32.0 32.0 32.0 32.0 6 34.56310948653856 36.0 36.0 36.0 32.0 36.0 7 34.51698749074994 36.0 36.0 36.0 32.0 36.0 8 34.51120041703714 36.0 36.0 36.0 32.0 36.0 9 34.63589899400354 36.0 36.0 36.0 32.0 36.0 10 34.37406714968912 36.0 36.0 36.0 32.0 36.0 11 34.5936913813361 36.0 36.0 36.0 32.0 36.0 12 34.44392149114386 36.0 36.0 36.0 32.0 36.0 13 34.528710757532544 36.0 36.0 36.0 32.0 36.0 14 34.418207100690985 36.0 36.0 36.0 32.0 36.0 15 34.36812412198212 36.0 36.0 36.0 32.0 36.0 16 34.38828070973358 36.0 36.0 36.0 32.0 36.0 17 34.304590577272094 36.0 36.0 36.0 32.0 36.0 18 34.33015522703733 36.0 36.0 36.0 32.0 36.0 19 34.32263650479139 36.0 36.0 36.0 32.0 36.0 20 34.30725981376235 36.0 36.0 36.0 32.0 36.0 21 34.28775251654448 36.0 36.0 36.0 32.0 36.0 22 34.27145812013925 36.0 36.0 36.0 32.0 36.0 23 34.21330467756356 36.0 36.0 36.0 32.0 36.0 24 34.20125024154229 36.0 36.0 36.0 32.0 36.0 25 34.17958692695451 36.0 36.0 36.0 32.0 36.0 26 34.12325149787287 36.0 36.0 36.0 32.0 36.0 27 34.12255250088695 36.0 36.0 36.0 32.0 36.0 28 34.10770021293001 36.0 36.0 36.0 32.0 36.0 29 34.082132456511516 36.0 36.0 36.0 32.0 36.0 30 34.05532763076059 36.0 36.0 36.0 32.0 36.0 31 34.06940760471441 36.0 36.0 36.0 32.0 36.0 32 34.04125324878266 36.0 36.0 36.0 32.0 36.0 33 33.99853614497881 36.0 36.0 36.0 32.0 36.0 34 34.01565442583145 36.0 36.0 36.0 32.0 36.0 35 33.97112055119485 36.0 36.0 36.0 32.0 36.0 36 33.934818065064505 36.0 36.0 36.0 32.0 36.0 37 33.93638692496624 36.0 36.0 36.0 32.0 36.0 38 33.29543589141377 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 5.0 9 4.0 10 18.0 11 10.0 12 6.0 13 6.0 14 159.0 15 390.0 16 516.0 17 565.0 18 758.0 19 921.0 20 1296.0 21 1806.0 22 2789.0 23 4087.0 24 6198.0 25 9214.0 26 13700.0 27 20115.0 28 28694.0 29 39622.0 30 54934.0 31 75140.0 32 106664.0 33 164446.0 34 367729.0 35 709656.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.84697995261085 16.993407944183073 11.147958279135649 26.01165382407043 2 17.342803412958673 18.992213605209578 36.71808899180952 26.946893990022225 3 19.3808758290399 22.917760608883317 27.81920172304832 29.88216183902846 4 12.736486822352788 14.629686241760865 35.36242257945858 37.271404356427766 5 15.187940213041987 35.845457573031254 33.133533981837246 15.833068232089511 6 35.45698729311942 34.74959970623377 16.221450526672893 13.571962473973914 7 31.36802183108743 29.618167222550838 20.25104259348547 18.762768352876265 8 28.818842745365338 32.16241354949868 19.010442717281155 20.008300987854835 9 27.236995067249808 14.187233254652062 18.342635700336825 40.2331359777613 10 16.268391490207772 25.53695695397157 30.466870464260857 27.727781091559795 11 38.56993380232158 20.82635877973583 21.489640380211032 19.11406703773156 12 25.522568250293432 23.124169336904835 27.56847708503815 23.78478532776358 13 29.292891631401353 18.48188263952325 25.328946141943664 26.896279587131733 14 23.88177022780613 19.537664348691706 24.08129710490292 32.49926831859925 15 25.511916917479905 26.682634194664217 21.661998422719794 26.14345046513608 16 26.829281933089288 25.197930253237633 22.795052939856916 25.17773487381616 17 24.7073606653956 25.515490184868018 24.4161506586094 25.360998491126978 18 25.968270695753105 23.942004419137 25.45042637961331 24.639298505496583 19 26.10477652190663 24.424139238068015 24.708046205563804 24.763038034461545 20 26.166129083370254 23.767975279660337 24.161174327979452 25.904721308989952 21 27.522529324005323 23.648411436439748 23.744350969679008 25.084708269875915 22 26.408854815548494 23.58645381737471 24.47122700686431 25.53346436021248 23 24.60268439694277 23.39489218915056 25.2671347790965 26.735288634810168 24 25.25981402262451 24.504172186911983 24.55500401434725 25.681009776116248 25 25.345717195783475 23.979502743925362 24.663013899530885 26.01176616076028 26 25.051284298025 25.112496092698894 25.116473305753846 24.719746303522257 27 26.02744407692991 24.0639926825737 24.218593197453067 25.68997004304332 28 25.0297634581783 24.00817469845081 25.240593131662603 25.721468711708283 29 24.874664757743194 24.362138690249825 25.211149803266547 25.55204674874043 30 24.878246400206784 24.572728436347006 25.41801344353603 25.13101171991018 31 25.671574646193 24.480039171045238 23.91285436622939 25.93553181653237 32 25.406377769768973 24.182087066747858 23.83977282612748 26.571762337355686 33 24.726855157269167 23.740097470283867 24.94061123052039 26.59243614192658 34 25.87644593305598 24.078968218212776 24.826519103560344 25.2180667451709 35 26.520646489152266 23.772794161512916 25.023179449957244 24.683379899377574 36 24.81540769390426 24.77172198739515 24.391600413118887 26.0212699055817 37 26.362102659860376 24.35911377342252 24.208550949328746 25.07023261738836 38 25.019091594292593 23.900501259206376 24.966958648445612 26.113448498055426 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 40.0 1 68.0 2 96.0 3 96.0 4 267.0 5 438.0 6 438.0 7 549.0 8 660.0 9 628.5 10 597.0 11 597.0 12 938.0 13 1279.0 14 1830.5 15 2382.0 16 2382.0 17 3287.0 18 4192.0 19 4192.0 20 5555.5 21 6919.0 22 7855.0 23 8791.0 24 8791.0 25 10738.0 26 12685.0 27 12685.0 28 16352.0 29 20019.0 30 24734.5 31 29450.0 32 29450.0 33 39493.0 34 49536.0 35 49536.0 36 56030.5 37 62525.0 38 72067.0 39 81609.0 40 81609.0 41 87561.0 42 93513.0 43 107859.5 44 122206.0 45 122206.0 46 124838.0 47 127470.0 48 127470.0 49 138696.5 50 149923.0 51 154562.5 52 159202.0 53 159202.0 54 151251.0 55 143300.0 56 143300.0 57 140171.0 58 137042.0 59 123264.5 60 109487.0 61 109487.0 62 105048.5 63 100610.0 64 83848.5 65 67087.0 66 67087.0 67 56539.5 68 45992.0 69 45992.0 70 36988.0 71 27984.0 72 21770.5 73 15557.0 74 15557.0 75 11672.0 76 7787.0 77 7787.0 78 7713.0 79 7639.0 80 6078.0 81 4517.0 82 4517.0 83 4589.0 84 4661.0 85 4661.0 86 3072.5 87 1484.0 88 1284.0 89 1084.0 90 1084.0 91 759.5 92 435.0 93 362.0 94 289.0 95 289.0 96 258.0 97 227.0 98 227.0 99 481.0 100 735.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11854988881287944 2 0.05430429917319529 3 0.012923677606435494 4 0.00354158472868665 5 6.213306541555527E-5 6 3.727983924933316E-4 7 6.213306541555527E-5 8 1.2426613083111053E-4 9 1.2426613083111053E-4 10 5.591975887399974E-4 11 0.0016775927662199919 12 0.002609588747453321 13 0.013607141326006602 14 0.008822895289008847 15 0.02174657289544434 16 0.010562621120644395 17 0.018702052690082134 18 0.0052813105603221975 19 0.007393834784451076 20 0.005343443625737752 21 0.006337572672386637 22 0.006834637195711079 23 0.009257826746917733 24 0.013731407456837711 25 0.01603033087721326 26 0.017521524447186583 27 0.008698629158177738 28 0.005778375083646639 29 0.010251955793566619 30 0.0031687863361933187 31 0.00602690734530886 32 0.006772504130295523 33 0.008574363027346626 34 0.01205381469061772 35 0.016465262335122143 36 0.014104205849331045 37 0.00956849207399551 38 0.006337572672386637 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1609449.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.63225334363099 #Duplication Level Percentage of deduplicated Percentage of total 1 81.46671882253777 41.24843546497085 2 10.819040245416813 10.955847732817677 3 3.1891016549444666 4.8441420879522346 4 1.3581497183001607 2.7506472246221927 5 0.7512398981625219 1.9018484422804178 6 0.47479677880466337 1.4424018474706588 7 0.3262507538112423 1.1563167574364985 8 0.24027137926910858 0.9732385077101724 9 0.177950616875121 0.810903664464889 >10 0.9866415511472774 9.06859760860158 >50 0.09333714269736318 3.2998891896677556 >100 0.09310277361143171 10.069721155144347 >500 0.016255914230124364 5.652333017596405 >1k 0.007142750192024342 5.825677299264355 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2897 0.17999949050886357 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2803 0.1741589823598014 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2520 0.15657532484719927 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2486 0.15446280062307038 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2475 0.15377933690349926 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2443 0.15179107881020149 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2348 0.14588843759572376 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2347 0.1458263045303082 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2311 0.1435895141753482 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2096 0.13023090511100383 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 2043 0.1269378526439794 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2023 0.12569519133566828 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2001 0.12432826389652607 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1951 0.12122161062574832 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1896 0.11780429202789278 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1855 0.115256836345855 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1849 0.11488403795336168 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1849 0.11488403795336168 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1837 0.11413844116837502 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1769 0.10991339272011726 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1639 0.10183609421609506 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.213306541555527E-5 2 0.0 0.0 0.0 0.0 6.213306541555527E-5 3 0.0 0.0 0.0 6.213306541555527E-5 1.2426613083111053E-4 4 0.0 0.0 0.0 6.213306541555527E-5 1.2426613083111053E-4 5 0.0 6.213306541555527E-5 0.0 6.213306541555527E-5 1.2426613083111053E-4 6 0.0 6.213306541555527E-5 0.0 6.213306541555527E-5 2.4853226166222106E-4 7 0.0 6.213306541555527E-5 0.0 6.213306541555527E-5 2.4853226166222106E-4 8 0.0 6.213306541555527E-5 0.0 6.213306541555527E-5 2.4853226166222106E-4 9 0.0 6.213306541555527E-5 0.0 6.213306541555527E-5 2.4853226166222106E-4 10 0.0 6.213306541555527E-5 0.0 6.213306541555527E-5 2.4853226166222106E-4 11 0.0 6.213306541555527E-5 0.0 1.2426613083111053E-4 2.4853226166222106E-4 12 0.0 6.213306541555527E-5 0.0 1.2426613083111053E-4 3.1066532707777633E-4 13 0.0 6.213306541555527E-5 0.0 1.2426613083111053E-4 3.727983924933316E-4 14 0.0 6.213306541555527E-5 0.0 1.2426613083111053E-4 3.727983924933316E-4 15 0.0 6.213306541555527E-5 0.0 1.863991962466658E-4 4.970645233244421E-4 16 0.0 6.213306541555527E-5 0.0 1.863991962466658E-4 5.591975887399974E-4 17 0.0 6.213306541555527E-5 0.0 1.863991962466658E-4 5.591975887399974E-4 18 0.0 6.213306541555527E-5 0.0 1.863991962466658E-4 7.455967849866632E-4 19 0.0 6.213306541555527E-5 0.0 1.863991962466658E-4 7.455967849866632E-4 20 0.0 6.213306541555527E-5 0.0 1.863991962466658E-4 7.455967849866632E-4 21 0.0 6.213306541555527E-5 0.0 1.863991962466658E-4 7.455967849866632E-4 22 0.0 6.213306541555527E-5 0.0 1.863991962466658E-4 7.455967849866632E-4 23 0.0 6.213306541555527E-5 0.0 3.727983924933316E-4 7.455967849866632E-4 24 0.0 6.213306541555527E-5 0.0 5.591975887399974E-4 7.455967849866632E-4 25 0.0 6.213306541555527E-5 0.0 7.455967849866632E-4 7.455967849866632E-4 26 0.0 6.213306541555527E-5 0.0 8.077298504022183E-4 8.077298504022183E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCTTA 35 0.0020671545 22.856653 17 TCTAGCG 595 0.0 21.512146 28 CTAGCGG 630 0.0 20.317657 29 TAAGCTA 40 0.0044888337 19.996468 5 TAGCGGC 645 0.0 19.845154 30 TCCGTAC 50 7.204709E-4 19.197203 3 AGCGGCG 745 0.0 17.825676 31 CGCTTAC 45 0.008854441 17.776846 18 GTATCAA 2185 0.0 17.666983 1 CCTATTC 610 0.0 17.57121 3 CTATTCC 630 0.0 17.012865 4 GTTTTCG 635 0.0 16.881529 28 GTCCTAT 650 0.0 16.510424 1 TTTTCGG 645 0.0 16.124187 29 GATATAC 90 8.496061E-6 16.017576 1 ACGCGAA 60 0.002442317 16.000154 11 TTCGGAA 660 0.0 16.000154 31 AACCGCG 265 0.0 15.696803 7 GGTATCA 980 0.0 15.527243 1 CGTTATT 300 0.0 15.471624 2 >>END_MODULE