##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062988_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 681124 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.06993293438493 32.0 32.0 32.0 32.0 32.0 2 31.099501706003604 32.0 32.0 32.0 32.0 32.0 3 31.26629512394219 32.0 32.0 32.0 32.0 32.0 4 31.402436267111423 32.0 32.0 32.0 32.0 32.0 5 31.262542503274 32.0 32.0 32.0 32.0 32.0 6 34.80570204544253 36.0 36.0 36.0 32.0 36.0 7 34.85541692848879 36.0 36.0 36.0 32.0 36.0 8 34.762317874572034 36.0 36.0 36.0 32.0 36.0 9 34.926787192934036 36.0 36.0 36.0 32.0 36.0 10 34.72480928582755 36.0 36.0 36.0 32.0 36.0 11 34.941468807441815 36.0 36.0 36.0 36.0 36.0 12 34.82702709051509 36.0 36.0 36.0 32.0 36.0 13 34.894663820391 36.0 36.0 36.0 32.0 36.0 14 34.837747605428675 36.0 36.0 36.0 32.0 36.0 15 34.800062837310094 36.0 36.0 36.0 32.0 36.0 16 34.80512505799238 36.0 36.0 36.0 32.0 36.0 17 34.767215661171825 36.0 36.0 36.0 32.0 36.0 18 34.77469007111774 36.0 36.0 36.0 32.0 36.0 19 34.7779156218251 36.0 36.0 36.0 32.0 36.0 20 34.758927889782186 36.0 36.0 36.0 32.0 36.0 21 34.732464279631905 36.0 36.0 36.0 32.0 36.0 22 34.7208584633635 36.0 36.0 36.0 32.0 36.0 23 34.65311308954023 36.0 36.0 36.0 32.0 36.0 24 34.63076914042083 36.0 36.0 36.0 32.0 36.0 25 34.61102970971512 36.0 36.0 36.0 32.0 36.0 26 34.54019532419941 36.0 36.0 36.0 32.0 36.0 27 34.522045912344886 36.0 36.0 36.0 32.0 36.0 28 34.47893188318133 36.0 36.0 36.0 32.0 36.0 29 34.43057798579994 36.0 36.0 36.0 32.0 36.0 30 34.418082463692365 36.0 36.0 36.0 32.0 36.0 31 34.398917084113904 36.0 36.0 36.0 32.0 36.0 32 34.36921764612611 36.0 36.0 36.0 32.0 36.0 33 34.32748368872628 36.0 36.0 36.0 32.0 36.0 34 34.30722893335134 36.0 36.0 36.0 32.0 36.0 35 34.262585079956075 36.0 36.0 36.0 32.0 36.0 36 34.217848732389406 36.0 36.0 36.0 32.0 36.0 37 34.20707683182504 36.0 36.0 36.0 32.0 36.0 38 33.731919591733664 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 3.0 21 13.0 22 50.0 23 175.0 24 441.0 25 1082.0 26 2422.0 27 4819.0 28 8443.0 29 13661.0 30 20876.0 31 30585.0 32 45236.0 33 71816.0 34 166165.0 35 315337.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.555205126059185 18.16438569366687 11.873833635064877 26.406575545209076 2 15.47148536830298 20.449874031747523 36.94231887292182 27.136321727027678 3 18.673545492450714 24.431674702403676 28.207345505370533 28.687434299775077 4 12.013689157464952 16.048202747521373 35.94798589975672 35.99012219525695 5 13.849627747117626 37.44257645094939 33.3378846405128 15.369911161420182 6 34.74541308985308 35.60795920854236 16.391753031390806 13.25487467021375 7 30.06263231921635 30.524373162946798 20.662205374105515 18.750789143731335 8 28.33085453282808 33.39861901692681 18.941314826261287 19.329211623983827 9 27.143805186301023 14.177171701154892 17.92095750709879 40.758065605445296 10 15.080588565203476 27.470144498571457 32.37842710618193 25.070839830043134 11 37.85549633675432 21.234051300121866 21.258864467251023 19.65158789587279 12 24.117888011087604 24.05284817235117 28.971651145684834 22.857612670876392 13 30.020275339402723 19.545662090400707 24.984474169863592 25.449588400332978 14 23.304420340496005 19.32540917659633 25.490512740705068 31.879657742202593 15 25.227124576435422 26.909784415172567 23.01563298312789 24.84745802526412 16 25.523840005637737 25.99820297038425 24.009871917595035 24.46808510638298 17 23.794786265055993 25.984108620456777 25.558929064311343 24.662176050175884 18 24.83116143316048 24.970489954839355 26.524685666633392 23.67366294536678 19 24.887538832870373 25.798973461513615 25.73569570298507 23.577792002630947 20 25.24063166178258 24.32112214516006 26.285522166301583 24.152724026755774 21 26.116830415607144 24.692273359916843 24.72780286702568 24.463093357450333 22 24.785574390490982 24.956028435434476 25.52097862057018 24.737418553504366 23 23.99408622831152 24.742997583399156 25.66177571712557 25.60114047116376 24 24.03057299405101 25.663755791896925 25.62661130719223 24.679059906859838 25 24.62048026497378 24.88930062661131 25.506956148953787 24.983262959461126 26 24.127765282092543 25.330776774860375 26.1389996535139 24.402458289533183 27 25.100275427088164 25.217141078570126 25.3061116624873 24.376471831854403 28 24.21233138165738 24.915287084290085 26.08981624491282 24.782565289139715 29 24.027783487294528 25.491100005285382 26.216665394260076 24.264451113160014 30 24.493337483336365 25.198935876580475 26.271868264809346 24.03585837527381 31 24.339914611730023 25.272931213699707 25.447201977907106 24.939952196663164 32 24.05993622306658 25.32314233531633 25.533383055067798 25.083538386549293 33 23.818717296703685 25.031418655046657 25.913343238529258 25.236520809720403 34 24.210275955626287 25.43193309881901 26.16836288252947 24.189428063025233 35 25.093815516704744 25.099100897927546 25.82657489678825 23.980508688579466 36 24.19324528279726 25.82995166812504 25.536025745679204 24.4407773033985 37 25.180143410010515 25.37056395017647 25.501964400021144 23.947328239791872 38 24.213359094672924 25.435309870155802 25.681814177741497 24.669516857429777 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 24.0 2 35.0 3 35.0 4 185.0 5 335.0 6 335.0 7 482.5 8 630.0 9 701.5 10 773.0 11 773.0 12 976.0 13 1179.0 14 1542.5 15 1906.0 16 1906.0 17 2732.5 18 3559.0 19 3559.0 20 4167.5 21 4776.0 22 5029.5 23 5283.0 24 5283.0 25 6159.0 26 7035.0 27 7035.0 28 9325.0 29 11615.0 30 13920.0 31 16225.0 32 16225.0 33 19602.0 34 22979.0 35 22979.0 36 25943.5 37 28908.0 38 33113.5 39 37319.0 40 37319.0 41 40434.5 42 43550.0 43 49107.0 44 54664.0 45 54664.0 46 60290.5 47 65917.0 48 65917.0 49 66775.0 50 67633.0 51 65222.5 52 62812.0 53 62812.0 54 60121.5 55 57431.0 56 57431.0 57 54775.0 58 52119.0 59 46848.0 60 41577.0 61 41577.0 62 37883.0 63 34189.0 64 28412.5 65 22636.0 66 22636.0 67 18733.0 68 14830.0 69 14830.0 70 11902.0 71 8974.0 72 6887.5 73 4801.0 74 4801.0 75 3674.0 76 2547.0 77 2547.0 78 2372.0 79 2197.0 80 1708.0 81 1219.0 82 1219.0 83 1067.5 84 916.0 85 916.0 86 603.0 87 290.0 88 236.5 89 183.0 90 183.0 91 110.5 92 38.0 93 27.5 94 17.0 95 17.0 96 12.0 97 7.0 98 7.0 99 7.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008074887979281306 2 0.0 3 0.0 4 1.468161450778419E-4 5 1.468161450778419E-4 6 1.468161450778419E-4 7 8.808968704670515E-4 8 0.0022022421761676288 9 0.003229955191712522 10 0.001468161450778419 11 0.004991748932646626 12 4.4044843523352573E-4 13 1.468161450778419E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 2.936322901556838E-4 23 2.936322901556838E-4 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 681124.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.499390641109656 #Duplication Level Percentage of deduplicated Percentage of total 1 80.1893904769151 50.919774311661094 2 13.091410354555547 16.625931602939808 3 3.5507634496464617 6.764139460898242 4 1.285598350613413 3.265388474926694 5 0.5574146624925054 1.7697745701346943 6 0.31622007169016747 1.2047869116488186 7 0.18535848437099728 0.8239105565402582 8 0.1315926792359155 0.668484395544931 9 0.09547037246337205 0.5456079428133509 >10 0.4714286952121173 5.755827364438264 >50 0.06940822359520638 3.108895017651961 >100 0.05246217635410795 6.358097091528929 >500 0.0023213352367443324 0.9040248866519379 >1k 0.0011606676183721662 1.2853574126210499 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2333 0.3425220664666052 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1933 0.2837956084354684 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1736 0.2548728278551336 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1674 0.2457702268603074 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1044 0.15327605546126696 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 867 0.12728959778248894 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 751 0.11025892495345928 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 685 0.10056905937832171 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.468161450778419E-4 2 0.0 0.0 0.0 0.0 1.468161450778419E-4 3 0.0 0.0 0.0 0.0 1.468161450778419E-4 4 0.0 0.0 0.0 0.0 1.468161450778419E-4 5 0.0 0.0 0.0 0.0 1.468161450778419E-4 6 0.0 0.0 0.0 0.0 2.936322901556838E-4 7 0.0 0.0 0.0 0.0 2.936322901556838E-4 8 0.0 0.0 0.0 0.0 2.936322901556838E-4 9 0.0 0.0 0.0 1.468161450778419E-4 2.936322901556838E-4 10 0.0 0.0 0.0 1.468161450778419E-4 2.936322901556838E-4 11 0.0 0.0 0.0 1.468161450778419E-4 2.936322901556838E-4 12 1.468161450778419E-4 0.0 0.0 1.468161450778419E-4 4.404484352335258E-4 13 1.468161450778419E-4 0.0 0.0 1.468161450778419E-4 5.872645803113676E-4 14 1.468161450778419E-4 0.0 0.0 1.468161450778419E-4 5.872645803113676E-4 15 1.468161450778419E-4 0.0 0.0 1.468161450778419E-4 5.872645803113676E-4 16 1.468161450778419E-4 0.0 0.0 1.468161450778419E-4 5.872645803113676E-4 17 1.468161450778419E-4 0.0 0.0 1.468161450778419E-4 5.872645803113676E-4 18 1.468161450778419E-4 0.0 0.0 1.468161450778419E-4 5.872645803113676E-4 19 1.468161450778419E-4 0.0 0.0 1.468161450778419E-4 5.872645803113676E-4 20 1.468161450778419E-4 0.0 0.0 4.404484352335258E-4 5.872645803113676E-4 21 1.468161450778419E-4 0.0 0.0 7.340807253892095E-4 5.872645803113676E-4 22 2.936322901556838E-4 0.0 0.0 8.808968704670516E-4 5.872645803113676E-4 23 2.936322901556838E-4 0.0 0.0 0.0016149775958562611 5.872645803113676E-4 24 5.872645803113676E-4 0.0 0.0 0.0027895067564789964 5.872645803113676E-4 25 5.872645803113676E-4 0.0 0.0 0.0032299551917125222 5.872645803113676E-4 26 5.872645803113676E-4 0.0 0.0 0.00381721977202389 5.872645803113676E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATCCG 30 8.41062E-4 26.668135 5 AAGACGG 170 0.0 22.589478 5 CGCAAGA 170 0.0 21.648249 2 GCGCAAG 185 0.0 19.892986 1 CAAGACG 190 0.0 19.369488 4 GACGGAC 200 0.0 19.201057 7 GTCCCGG 70 1.7846745E-5 18.28672 1 AGACGGA 220 0.0 18.18282 6 ATAGACG 55 0.0013633688 17.455507 3 CAACGGA 65 2.0991158E-4 17.230453 14 AAACGCT 65 2.0991158E-4 17.230453 29 AACGCTT 65 2.0991158E-4 17.230453 30 CGCGTAA 65 2.0991158E-4 17.230453 10 ACTGTTC 75 3.229041E-5 17.067606 8 ATCATAG 75 3.229041E-5 17.067606 1 ATCGAAC 75 3.229041E-5 17.067606 8 TAGCGGC 180 0.0 16.888578 30 CGTTTAT 125 2.8467184E-9 16.639696 31 AATAACG 135 4.4201443E-10 16.593506 2 TTAGGAC 70 3.6920886E-4 16.000881 3 >>END_MODULE