##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062987_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 908091 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.132971255083465 32.0 32.0 32.0 32.0 32.0 2 30.709728430300487 32.0 32.0 32.0 32.0 32.0 3 30.778866875676556 32.0 32.0 32.0 32.0 32.0 4 30.83983983983984 32.0 32.0 32.0 32.0 32.0 5 30.728193540074727 32.0 32.0 32.0 32.0 32.0 6 34.387621945377724 36.0 36.0 36.0 32.0 36.0 7 34.296754400164744 36.0 36.0 36.0 32.0 36.0 8 34.26390526940582 36.0 36.0 36.0 32.0 36.0 9 34.41139709566552 36.0 36.0 36.0 32.0 36.0 10 34.107101601051 36.0 36.0 36.0 32.0 36.0 11 34.444038097503444 36.0 36.0 36.0 32.0 36.0 12 34.2416156530568 36.0 36.0 36.0 32.0 36.0 13 34.31757059589843 36.0 36.0 36.0 32.0 36.0 14 34.22459092756122 36.0 36.0 36.0 32.0 36.0 15 34.16620580977017 36.0 36.0 36.0 32.0 36.0 16 34.17551875307651 36.0 36.0 36.0 32.0 36.0 17 34.10413273559588 36.0 36.0 36.0 32.0 36.0 18 34.13239091676935 36.0 36.0 36.0 32.0 36.0 19 34.12257361872324 36.0 36.0 36.0 32.0 36.0 20 34.07758914029541 36.0 36.0 36.0 32.0 36.0 21 34.05922534195361 36.0 36.0 36.0 32.0 36.0 22 34.036114222032815 36.0 36.0 36.0 32.0 36.0 23 33.98345980744221 36.0 36.0 36.0 32.0 36.0 24 33.966905299138524 36.0 36.0 36.0 32.0 36.0 25 33.95444839779273 36.0 36.0 36.0 32.0 36.0 26 33.892026239661 36.0 36.0 36.0 32.0 36.0 27 33.92012804884092 36.0 36.0 36.0 32.0 36.0 28 33.883216549883215 36.0 36.0 36.0 32.0 36.0 29 33.848365417122295 36.0 36.0 36.0 32.0 36.0 30 33.81511874911215 36.0 36.0 36.0 32.0 36.0 31 33.831783378538056 36.0 36.0 36.0 32.0 36.0 32 33.77463932579444 36.0 36.0 36.0 32.0 36.0 33 33.728915934636504 36.0 36.0 36.0 27.0 36.0 34 33.72678839455517 36.0 36.0 36.0 27.0 36.0 35 33.67401284673012 36.0 36.0 36.0 27.0 36.0 36 33.61791714707006 36.0 36.0 36.0 27.0 36.0 37 33.61468399092161 36.0 36.0 36.0 27.0 36.0 38 32.9753130468202 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 0.0 8 3.0 9 2.0 10 6.0 11 6.0 12 5.0 13 5.0 14 229.0 15 352.0 16 437.0 17 493.0 18 604.0 19 774.0 20 1027.0 21 1484.0 22 2108.0 23 3210.0 24 4655.0 25 7015.0 26 9965.0 27 14092.0 28 19359.0 29 26441.0 30 35136.0 31 47636.0 32 63553.0 33 94050.0 34 199524.0 35 375918.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.65995880907964 17.5007387022655 11.524416866226533 25.314885622428324 2 16.06007018471692 20.649952347111352 38.36481729386683 24.9251601743049 3 18.819122761804696 25.49885130387473 28.843175996105668 26.838849938214903 4 12.25965456331464 16.19724514023179 36.66498544161891 34.87811485483466 5 14.001585745906242 37.238379455780816 33.71494014910416 15.045094649208778 6 32.430997876857745 36.27368713164363 17.815784373320646 13.479530618177973 7 28.71749637426205 31.383528743264716 21.723153296310613 18.17582158616262 8 27.59024721145174 32.89082898262174 20.33115696809454 19.187766837831973 9 27.90970929060918 14.23759124931587 18.93646988345856 38.91622957661639 10 15.82590654860162 27.144425589178127 31.945617545455445 25.084050316764806 11 36.37962419486453 21.75421247317133 22.883521992077764 18.982641339886374 12 24.69272709452696 24.387133576853742 29.395012934039155 21.525126394580145 13 29.690322211159764 20.12861573433659 25.440540278597673 24.74052177590597 14 23.74979625819923 20.22836702598644 26.016396259080278 30.00544045673405 15 24.87225720608143 27.26684943698444 23.548071934696143 24.312821422237985 16 24.891519823788546 26.31079295154185 24.711894273127754 24.08579295154185 17 23.432738006729778 25.98840187023973 25.984436697672113 24.59442342535838 18 24.194232236877607 25.124360302935862 27.4257830266495 23.25562443353703 19 25.029459379095403 25.380989614880566 26.262348160303073 23.327202845720958 20 25.352844783535673 24.394415273201417 26.362813419554914 23.889926523707995 21 26.761545221675743 24.448205912087378 25.01260960444387 23.77763926179301 22 25.336908819593955 24.82712670767096 25.700441062293855 24.13552341044123 23 23.954969758108923 24.662008872129444 26.05009625423453 25.332925115527104 24 24.067667806578445 25.802646577786586 26.074793631913124 24.05489198372184 25 24.51638199544467 24.874992840999706 26.15491195531022 24.453713208245407 26 23.825127102589633 25.86372487686248 26.65376549682354 23.657382523724348 27 24.63679534111283 25.407035906381743 25.86385001343571 24.09231873906972 28 23.79641865997093 25.398000088101846 26.433967666622614 24.371613585304612 29 23.7037852839789 25.552924591680526 26.475181444729568 24.268108679611007 30 23.833294790049226 25.757155285385487 26.580109462926867 23.82944046163842 31 24.24939897955925 25.627974128864512 25.538440529536725 24.584186362039514 32 23.75792643039168 26.00783227133666 25.53692686869933 24.69731442957233 33 23.704874341974847 25.340300874430078 26.134226118367437 24.82059866522764 34 24.322380629849285 25.640009030886734 26.272942031619117 23.764668307644865 35 24.913266531123824 25.413071587327114 26.221152172907438 23.452509708641628 36 23.869469876943782 26.246229179951957 25.667899101170867 24.21640184193339 37 24.685688357914398 26.085553558527604 25.556598121619 23.672159961938995 38 23.87169315956751 26.069829369126097 25.88459564645688 24.17388182484951 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 928.0 1 706.0 2 484.0 3 484.0 4 908.0 5 1332.0 6 1332.0 7 1524.0 8 1716.0 9 1602.5 10 1489.0 11 1489.0 12 1947.5 13 2406.0 14 2827.0 15 3248.0 16 3248.0 17 4722.5 18 6197.0 19 6197.0 20 7370.0 21 8543.0 22 8624.0 23 8705.0 24 8705.0 25 10213.0 26 11721.0 27 11721.0 28 14763.5 29 17806.0 30 21656.5 31 25507.0 32 25507.0 33 30511.5 34 35516.0 35 35516.0 36 38412.0 37 41308.0 38 46692.5 39 52077.0 40 52077.0 41 55302.5 42 58528.0 43 64874.5 44 71221.0 45 71221.0 46 74726.0 47 78231.0 48 78231.0 49 81070.5 50 83910.0 51 82341.0 52 80772.0 53 80772.0 54 76411.5 55 72051.0 56 72051.0 57 69452.5 58 66854.0 59 59895.5 60 52937.0 61 52937.0 62 49535.0 63 46133.0 64 37750.0 65 29367.0 66 29367.0 67 24270.5 68 19174.0 69 19174.0 70 15345.5 71 11517.0 72 9014.0 73 6511.0 74 6511.0 75 4889.0 76 3267.0 77 3267.0 78 3119.5 79 2972.0 80 2351.0 81 1730.0 82 1730.0 83 1782.0 84 1834.0 85 1834.0 86 1239.0 87 644.0 88 566.5 89 489.0 90 489.0 91 356.5 92 224.0 93 199.0 94 174.0 95 174.0 96 150.0 97 126.0 98 126.0 99 284.0 100 442.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12058262883345391 2 0.05351886540005352 3 0.011562717833344895 4 0.0025327858111136438 5 1.1012112222233234E-4 6 3.30363366666997E-4 7 0.0 8 2.2024224444466467E-4 9 2.2024224444466467E-4 10 4.4048448888932935E-4 11 0.001541695711112653 12 0.0024226646888913113 13 0.01266392905556822 14 0.008699568655564255 15 0.023345677911134455 16 0.010021022122232243 17 0.020482528733353815 18 0.004845329377782623 19 0.006717388455562273 20 0.004735208255560291 21 0.005836419477783614 22 0.006166782844450612 23 0.008699568655564255 24 0.013875261400013876 25 0.015747320477793522 26 0.01794974292224017 27 0.006937630700006938 28 0.00561617723333895 29 0.011122233344455567 30 0.0023125435666689793 31 0.005726298355561282 32 0.005836419477783614 33 0.007818599677785596 34 0.010571627733343905 35 0.015086593744459531 36 0.01453598813334787 37 0.008259084166674925 38 0.005395934988894285 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 908091.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.73895317247754 #Duplication Level Percentage of deduplicated Percentage of total 1 83.13138468351364 51.324446661386645 2 11.076064892332461 13.676493034460727 3 2.909387251351643 5.388675698154066 4 1.0321977446084898 2.549072328764819 5 0.48402067272333105 1.4941464823888404 6 0.28441282919733757 1.0535610206079764 7 0.18584701795187217 0.803180023700266 8 0.12251316364484466 0.6051067578624914 9 0.0941956689804259 0.5233987796609438 >10 0.5275414869517996 6.245812500072715 >50 0.07021938631172658 3.066273231058702 >100 0.07451312472198 9.103962160693294 >500 0.006269133020210678 2.602411664185477 >1k 0.0014329446903338693 1.5634596570031138 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4086 0.44995490540044997 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2631 0.2897286725669564 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1558 0.1715687084223938 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1347 0.14833315163348168 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1199 0.13203522554457647 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1162 0.1279607440223502 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1144 0.12597856382234818 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1011 0.111332454566778 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 916 0.10087094795565642 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 3.30363366666997E-4 0.0 16 0.0 0.0 0.0 3.30363366666997E-4 0.0 17 0.0 0.0 0.0 3.30363366666997E-4 1.1012112222233234E-4 18 0.0 0.0 0.0 3.30363366666997E-4 1.1012112222233234E-4 19 0.0 0.0 0.0 3.30363366666997E-4 1.1012112222233234E-4 20 0.0 0.0 0.0 5.506056111116617E-4 1.1012112222233234E-4 21 0.0 0.0 0.0 9.91090100000991E-4 1.1012112222233234E-4 22 0.0 0.0 0.0 0.0020923013222243145 1.1012112222233234E-4 23 0.0 0.0 0.0 0.0037441181555592997 1.1012112222233234E-4 24 0.0 0.0 0.0 0.00517569274444962 1.1012112222233234E-4 25 0.0 0.0 0.0 0.005946540600005946 1.1012112222233234E-4 26 0.0 0.0 0.0 0.007488236311118599 1.1012112222233234E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGGC 205 0.0 17.949644 30 TCTAGCG 225 0.0 17.066109 28 GTATAGG 95 7.6288416E-7 16.85455 1 CTAGCGG 220 0.0 16.726727 29 CGTCGTA 145 6.91216E-11 16.552094 10 GATAACG 150 1.1459633E-10 16.000359 11 CGCGGTC 100 1.3133194E-6 16.000357 10 CTAACAC 80 5.6203447E-5 15.999477 3 CCGATAA 145 1.2187229E-9 15.448622 9 CGATAAC 145 1.2187229E-9 15.448622 10 GTCCTAG 115 3.314599E-7 15.315656 1 GAGTAGG 115 3.314599E-7 15.315656 1 ATAATAG 105 2.1843425E-6 15.237597 3 CCGGTCC 275 0.0 15.127611 9 GTATTAC 85 9.369522E-5 15.069949 1 CGTTTAT 170 4.7293724E-11 15.057503 31 CGAACGA 150 1.9681465E-9 14.933667 16 ACCGTCG 150 1.9717845E-9 14.932023 8 CGGCATC 205 0.0 14.828784 25 CGCGCTA 65 0.004161589 14.768747 24 >>END_MODULE