##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062985_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 146429 Sequences flagged as poor quality 0 Sequence length 38 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.240594417772435 32.0 32.0 32.0 21.0 32.0 2 31.18797505958519 32.0 32.0 32.0 32.0 32.0 3 31.342684850678484 32.0 32.0 32.0 32.0 32.0 4 31.512944840161442 32.0 32.0 32.0 32.0 32.0 5 31.316146391766658 32.0 32.0 32.0 32.0 32.0 6 34.796932301661556 36.0 36.0 36.0 32.0 36.0 7 34.86973891783732 36.0 36.0 36.0 32.0 36.0 8 34.87577597333861 36.0 36.0 36.0 32.0 36.0 9 34.87557109588948 36.0 36.0 36.0 32.0 36.0 10 34.78001625361097 36.0 36.0 36.0 32.0 36.0 11 34.95300794241578 36.0 36.0 36.0 36.0 36.0 12 34.84315265418736 36.0 36.0 36.0 32.0 36.0 13 34.86227454944034 36.0 36.0 36.0 32.0 36.0 14 34.77326895628598 36.0 36.0 36.0 32.0 36.0 15 34.783034781361614 36.0 36.0 36.0 32.0 36.0 16 34.73866515512638 36.0 36.0 36.0 32.0 36.0 17 34.679762888498864 36.0 36.0 36.0 32.0 36.0 18 34.63166449268929 36.0 36.0 36.0 32.0 36.0 19 34.59515533125269 36.0 36.0 36.0 32.0 36.0 20 34.50973509345826 36.0 36.0 36.0 32.0 36.0 21 34.43753628038162 36.0 36.0 36.0 32.0 36.0 22 34.44253529014061 36.0 36.0 36.0 32.0 36.0 23 34.34978043966701 36.0 36.0 36.0 32.0 36.0 24 34.335343408751 36.0 36.0 36.0 32.0 36.0 25 34.321958082073905 36.0 36.0 36.0 32.0 36.0 26 34.22813103961647 36.0 36.0 36.0 32.0 36.0 27 34.16564341762902 36.0 36.0 36.0 32.0 36.0 28 34.07547002301457 36.0 36.0 36.0 32.0 36.0 29 33.99963804983985 36.0 36.0 36.0 32.0 36.0 30 33.94288699642831 36.0 36.0 36.0 32.0 36.0 31 33.87070867109657 36.0 36.0 36.0 32.0 36.0 32 33.744879771083596 36.0 36.0 36.0 32.0 36.0 33 33.52844040456467 36.0 36.0 36.0 21.0 36.0 34 33.34239119300138 36.0 36.0 36.0 21.0 36.0 35 33.1302815699076 36.0 36.0 36.0 14.0 36.0 36 33.04596767033853 36.0 36.0 36.0 14.0 36.0 37 32.91676512166306 36.0 36.0 36.0 14.0 36.0 38 32.51706970613745 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 10.0 22 8.0 23 42.0 24 127.0 25 369.0 26 751.0 27 1591.0 28 2833.0 29 4287.0 30 6422.0 31 8900.0 32 11636.0 33 16785.0 34 32580.0 35 60086.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.00288208056167 17.71864883692341 13.756129543374628 19.522339539140294 2 13.61547234495899 23.498077566602245 37.90984026388215 24.97660982455661 3 19.230480301033264 32.381563761276794 27.39279787473793 20.99515806295201 4 10.96640692758948 17.10248652930772 33.319902478334214 38.611204064768586 5 11.114601615800149 41.03285551359362 30.34781361615527 17.50472925445096 6 28.948500638534718 34.93638555204229 19.247553421794862 16.86756038762813 7 26.206736416532355 33.94159586964241 21.393449340290108 18.458218373535114 8 32.60804239742119 26.841228213954 20.153116975359232 20.397612413265584 9 30.433951182199397 13.11346655557225 19.709469888404747 36.74311237382361 10 18.50000341467079 27.264780402521392 28.779528365670267 25.45568781713755 11 34.031320643896706 23.965141612200437 20.447886573647224 21.555651170255633 12 25.572803201551604 27.34909068558824 28.29152695162843 18.786579161231725 13 32.589172909737826 21.723838857057004 26.42919093895335 19.257797294251823 14 26.71943399190051 19.21750472925445 28.94030554056915 25.122755738275888 15 26.12665523905784 23.584126095240695 31.56137103988964 18.727847625811826 16 22.38438003660502 26.15893135192723 28.708307154369383 22.74838145709837 17 20.14081910004166 24.55046473034713 30.809470801548873 24.499245368062336 18 22.276325044902308 21.11193820896134 36.01335800968388 20.598378736452478 19 21.643936651892727 26.162850255072424 34.6181425810461 17.575070511988745 20 23.83271073352956 19.581503663891716 37.51784141119587 19.067944191382853 21 25.63494936112382 21.71974130807422 31.224689098470932 21.42062023233103 22 22.4921292913289 23.52402871015987 32.439612371866225 21.544229626644995 23 20.644817624924023 24.019832137076673 32.926537775987 22.408812462012307 24 19.72355202862821 26.95367720874963 33.14439079690498 20.178379965717173 25 23.25768802627895 22.939445055282764 31.766248489028815 22.036618429409476 26 19.8164298055713 23.382663270253843 34.297167910728064 22.50373901344679 27 22.233983705413547 25.8794364504299 33.51931652882968 18.36726331532688 28 20.4693059434948 23.14090788026962 34.49863073571492 21.891155440520663 29 18.778384063266156 26.024216514488252 36.06184567264681 19.13555374959878 30 21.879545718402778 24.55387935449945 34.6939472372276 18.872627689870175 31 18.94501772189935 26.10070409550021 32.98800101072875 21.966277171871692 32 18.369995014648737 27.46791960608896 33.076098313858594 21.08598706540371 33 19.472918615847952 26.290557198369175 32.5461486454186 21.690375540364272 34 18.662969766917755 27.498651223459834 34.1489732225174 19.689405787105013 35 21.59408313926886 26.640214711566696 32.11932062637865 19.646381522785784 36 20.588817788825985 28.28333185366287 31.76010216555464 19.36774819195651 37 21.843350702388186 28.891134952775747 31.20010380457423 18.065410540261833 38 19.99945366013563 29.477084457313786 30.09854605303594 20.424915829514646 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 47.0 1 65.5 2 84.0 3 84.0 4 442.5 5 801.0 6 801.0 7 1126.5 8 1452.0 9 1551.0 10 1650.0 11 1650.0 12 2013.0 13 2376.0 14 2698.0 15 3020.0 16 3020.0 17 4366.5 18 5713.0 19 5713.0 20 5922.5 21 6132.0 22 4771.0 23 3410.0 24 3410.0 25 2508.5 26 1607.0 27 1607.0 28 2352.5 29 3098.0 30 3780.5 31 4463.0 32 4463.0 33 4024.0 34 3585.0 35 3585.0 36 3601.5 37 3618.0 38 4300.0 39 4982.0 40 4982.0 41 5829.5 42 6677.0 43 8364.5 44 10052.0 45 10052.0 46 15477.0 47 20902.0 48 20902.0 49 18477.0 50 16052.0 51 12674.5 52 9297.0 53 9297.0 54 8176.5 55 7056.0 56 7056.0 57 6994.5 58 6933.0 59 6455.0 60 5977.0 61 5977.0 62 5554.5 63 5132.0 64 4545.5 65 3959.0 66 3959.0 67 3559.0 68 3159.0 69 3159.0 70 2708.5 71 2258.0 72 1787.5 73 1317.0 74 1317.0 75 1031.0 76 745.0 77 745.0 78 588.0 79 431.0 80 327.5 81 224.0 82 224.0 83 184.5 84 145.0 85 145.0 86 98.0 87 51.0 88 33.5 89 16.0 90 16.0 91 9.5 92 3.0 93 2.5 94 2.0 95 2.0 96 1.5 97 1.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.004780473813247376 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 6.829248304639108E-4 8 0.0034146241523195543 9 0.004780473813247376 10 0.0013658496609278215 11 0.005463398643711286 12 0.0 13 0.0 14 0.0 15 0.0 16 6.829248304639108E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 146429.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.94145285428433 #Duplication Level Percentage of deduplicated Percentage of total 1 70.8982677980515 26.190850173121444 2 14.582293457563825 10.773822125398658 3 5.643983509881131 6.254908522218959 4 2.6398979535244855 3.900866631609859 5 1.5306971327158783 2.827308798120591 6 0.9502153698260404 2.106140177150701 7 0.6544284842770783 1.6922877298895709 8 0.5102323775719594 1.507898025664315 9 0.36788493890152146 1.2231183713608642 >10 1.933706764276339 13.256253884134972 >50 0.153439446878524 4.064768590921197 >100 0.09982807387277466 7.926708507194613 >500 0.020335348381491137 4.740864173080469 >1k 0.012940676242767088 10.11616551366191 >5k 0.0018486680346810123 3.418038776471874 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5005 3.418038776471874 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3668 2.5049682781416247 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2560 1.7482875659876118 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2296 1.5679954107451395 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2211 1.5099468001557068 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1628 1.1118016239952468 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1417 0.9677044847673616 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 1033 0.7054613498692199 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAA 742 0.5067302242042219 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA 725 0.4951205020863354 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 724 0.4944375772558714 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTC 626 0.42751094387040817 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 622 0.42477924454855254 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAA 613 0.41863292107437733 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 606 0.4138524472611299 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 597 0.40770612378695475 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 582 0.39746225132999613 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAA 561 0.383120829890254 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATG 544 0.3715111077723675 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 478 0.3264380689617494 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 471 0.321657595148502 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAA 462 0.3155112716743268 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 416 0.2840967294729869 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGT 359 0.245170014136544 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 358 0.24448708930608007 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACG 357 0.24380416447561618 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAA 356 0.24312123964515225 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGC 320 0.21853594574845148 No Hit CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 281 0.19190187736035894 No Hit GAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 279 0.19053602769943112 No Hit TATCAACGCAGAGTACATGGGAGTGGTATCAACGCAAA 278 0.1898531028689672 No Hit GTATCAACGCAGAGTACATGGGAGTGGTATCAACGCAA 275 0.1878043283775755 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACG 256 0.17482875659876115 No Hit GTATCAACGCAGAGTACATGGGTGGTATCAACGCAAAA 254 0.17346290693783334 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT 230 0.15707271100669948 No Hit ACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 228 0.15570686134577166 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 227 0.15502393651530777 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 220 0.15024346270206038 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 219 0.14956053787159648 No Hit TATCAACGCAGAGTACATGGGTGGTATCAACGCAAAAA 212 0.1447800640583491 No Hit CAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTAT 210 0.14341421439742127 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 205 0.13999959024510172 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 205 0.13999959024510172 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 195 0.13317034194046262 No Hit ATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAA 193 0.13180449227953478 No Hit ACGCAGAGTACATGGGAGTGGTATCAACGCAAAAAAAA 193 0.13180449227953478 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 191 0.13043864261860696 No Hit GGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 189 0.12907279295767915 No Hit ACGCAGAGTACATGGGTGGTATCAACGCAAAAAAAAAA 184 0.1256581688053596 No Hit ATACCACTGCTTCCATGTACTCTGCGTTGATACCACTG 184 0.1256581688053596 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 173 0.11814599567025659 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAA 173 0.11814599567025659 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTT 167 0.11404844668747312 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGT 167 0.11404844668747312 No Hit GTACATGGGGTATCAACGCAAAAAAAAAAAAAAAAAAA 162 0.11063382253515355 No Hit GGTATCAACGCAGAGTACATGGGAGTGGTATCAACGCA 158 0.10790212321329792 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT 153 0.10448749906097836 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT 152 0.10380457423051445 No Hit CCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTT 148 0.10107287490865881 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.829248304639109E-4 0.0 5 0.0 0.0 0.0 6.829248304639109E-4 0.0 6 0.0 0.0 0.0 6.829248304639109E-4 0.0 7 0.0 0.0 0.0 6.829248304639109E-4 0.0 8 0.0 0.0 0.0 6.829248304639109E-4 0.0 9 0.0 0.0 0.0 6.829248304639109E-4 0.0 10 0.0 0.0 0.0 6.829248304639109E-4 0.0 11 0.0 0.0 0.0 6.829248304639109E-4 0.0 12 0.0 0.0 0.0 0.0013658496609278217 0.0 13 0.0 0.0 0.0 0.0013658496609278217 0.0 14 0.0 0.0 0.0 0.0013658496609278217 0.0 15 0.0 0.0 0.0 0.0013658496609278217 0.0 16 0.0 0.0 0.0 0.0013658496609278217 0.0 17 0.0 0.0 0.0 0.0013658496609278217 0.0 18 0.0 0.0 0.0 0.0013658496609278217 0.0 19 0.0 0.0 0.0 0.0013658496609278217 0.0 20 0.0 0.0 0.0 0.0027316993218556435 0.0 21 0.0 0.0 0.0 0.0034146241523195543 0.0 22 0.0 0.0 0.0 0.00819509796556693 0.0 23 0.0 0.0 0.0 0.012292646948350396 0.0 24 0.0 0.0 0.0 0.02390236906623688 0.0 25 0.0 0.0 0.0 0.030048692540412078 0.0 26 0.0 0.0 0.0 0.04097548982783465 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCCTTC 25 2.8829923E-4 31.999659 16 CTCACGA 20 0.0037431093 31.999657 26 GCCTAGC 20 0.0037431093 31.999657 12 TCTCACG 20 0.0037431093 31.999657 25 GGCCTAG 20 0.0037431093 31.999657 11 TAATACT 30 8.3821814E-4 26.666382 4 CTACGAC 30 8.3821814E-4 26.666382 4 TGTTCCT 30 8.3821814E-4 26.666382 32 GAACCGC 30 8.3821814E-4 26.666382 6 AATACTT 30 8.3821814E-4 26.666382 5 CTAATAC 30 8.3821814E-4 26.666382 3 CCCTGGA 30 8.3821814E-4 26.666382 2 TCCTAAG 35 0.0020581197 22.8569 2 ATAGAAC 55 5.7893638E-5 20.363419 3 GTCACTG 40 0.004465416 19.999786 30 TTGTTCC 40 0.004465416 19.999786 31 GGTAGCA 40 0.004465416 19.999786 17 AAAAAGT 60 1.1267228E-4 18.672846 1 TACTTGT 45 0.008815016 17.777588 7 ACTTGTA 45 0.008815016 17.777588 8 >>END_MODULE