##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062984_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1137224 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16622934443874 32.0 32.0 32.0 32.0 32.0 2 31.23698145659958 32.0 32.0 32.0 32.0 32.0 3 31.344623398732352 32.0 32.0 32.0 32.0 32.0 4 31.445042489430403 32.0 32.0 32.0 32.0 32.0 5 31.35168357333296 32.0 32.0 32.0 32.0 32.0 6 34.88376608302322 36.0 36.0 36.0 36.0 36.0 7 34.90883766083023 36.0 36.0 36.0 36.0 36.0 8 34.84528202007696 36.0 36.0 36.0 32.0 36.0 9 34.9698942336778 36.0 36.0 36.0 32.0 36.0 10 34.80450553277103 36.0 36.0 36.0 32.0 36.0 11 34.988909836584526 36.0 36.0 36.0 36.0 36.0 12 34.874362482677114 36.0 36.0 36.0 32.0 36.0 13 34.94404092773279 36.0 36.0 36.0 36.0 36.0 14 34.892091619592975 36.0 36.0 36.0 32.0 36.0 15 34.85608464119646 36.0 36.0 36.0 32.0 36.0 16 34.862422882387285 36.0 36.0 36.0 32.0 36.0 17 34.83043709946325 36.0 36.0 36.0 32.0 36.0 18 34.83394652240895 36.0 36.0 36.0 32.0 36.0 19 34.8267183949688 36.0 36.0 36.0 32.0 36.0 20 34.802918334470604 36.0 36.0 36.0 32.0 36.0 21 34.80201613754195 36.0 36.0 36.0 32.0 36.0 22 34.78898880079914 36.0 36.0 36.0 32.0 36.0 23 34.737824738134265 36.0 36.0 36.0 32.0 36.0 24 34.70469670003447 36.0 36.0 36.0 32.0 36.0 25 34.68341857013218 36.0 36.0 36.0 32.0 36.0 26 34.61683626093012 36.0 36.0 36.0 32.0 36.0 27 34.61608618882472 36.0 36.0 36.0 32.0 36.0 28 34.58581686633416 36.0 36.0 36.0 32.0 36.0 29 34.541371796585366 36.0 36.0 36.0 32.0 36.0 30 34.521171730459436 36.0 36.0 36.0 32.0 36.0 31 34.51994154185983 36.0 36.0 36.0 32.0 36.0 32 34.49040822212687 36.0 36.0 36.0 32.0 36.0 33 34.44503897209345 36.0 36.0 36.0 32.0 36.0 34 34.434983785076646 36.0 36.0 36.0 32.0 36.0 35 34.40342711726098 36.0 36.0 36.0 32.0 36.0 36 34.37353590849296 36.0 36.0 36.0 32.0 36.0 37 34.37657137028413 36.0 36.0 36.0 32.0 36.0 38 33.917167594071174 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 7.0 21 19.0 22 72.0 23 232.0 24 661.0 25 1721.0 26 3790.0 27 7442.0 28 13149.0 29 20878.0 30 32192.0 31 47144.0 32 69216.0 33 111758.0 34 268275.0 35 560668.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38749874684954 18.37206520955314 11.875117620262872 26.365318423334454 2 15.953789145830804 20.473311279591847 36.309005629507695 27.26389394506965 3 18.338515543112 23.949811119005577 28.600434039380108 29.111239298502316 4 11.924264367725126 15.775237663106227 35.87163070613488 36.42886726303377 5 14.127835965329579 36.982544320682926 33.12173601835348 15.767883695634014 6 35.030508528230605 35.78374689924492 16.022099447513813 13.163645125010662 7 30.48612448437812 30.3582687239661 20.410228812568203 18.745377979087582 8 28.611087417417707 32.91156604956564 18.831180822353872 19.64616571066278 9 27.16915395323356 13.779752247439506 18.306552243570295 40.74454155575663 10 15.817677396094846 26.68141028741267 31.07213675514305 26.42877556134944 11 38.553778238961634 20.8904561323285 21.411222596445562 19.144543032264306 12 24.619752888840427 23.865721790223713 28.278760240973387 23.23576507996247 13 29.59125798767346 18.897118502032587 25.33324657212626 26.17837693816769 14 23.310095460524927 19.866446715862487 24.8395215014808 31.98393632213179 15 25.169887374870736 27.447450985909548 22.022662201993626 25.359999437226087 16 25.98830660301454 25.89052454971452 23.44931469025864 24.6718541570123 17 24.103254943617088 26.012729242435967 24.79546685613388 25.08854895781306 18 25.2538637946438 24.553649940557005 26.23458527079977 23.957900993999424 19 25.577722594669122 24.689770880670828 25.293345901950715 24.439160622709334 20 25.704434658431406 24.14968379140785 24.949614148136163 25.19626740202458 21 27.183826581218828 24.078281851244785 24.428256878152414 24.309634689383973 22 25.764229386646782 24.166215275090924 25.378641323081467 24.690914015180827 23 24.322779545242707 23.860424789530978 25.862056836747794 25.95473882847852 24 24.69654175430698 25.048978917082298 25.334938411429935 24.919540917180786 25 24.80129227073318 24.49229394762505 25.449889775356283 25.256524006285485 26 24.561321746042772 25.63947440387681 25.819122546765232 23.98008130331518 27 25.485568366478372 24.456219706935485 25.098749234979213 24.95946269160693 28 24.43291734961626 24.648530104886987 26.064170295385956 24.854382250110795 29 24.290201402713976 24.624260479905455 26.029788326662118 25.05574979071845 30 24.196024705774764 25.152652423796894 26.091517590202105 24.559805280226236 31 24.955417754110005 25.01987295378923 24.940293205208473 25.08441608689229 32 24.865110127820024 24.70656616462544 24.780694040927735 25.647629666626802 33 24.266547311699366 24.289058268203977 25.61447876583681 25.829915654259842 34 25.276990285115335 24.70102635892313 25.561630778105283 24.460352577856252 35 25.618171969638347 24.44355729390164 25.859373351248305 24.078897385211707 36 24.244739822585522 25.33529014512532 25.190639662898427 25.22933036939073 37 25.5782501952122 25.07588654477922 24.946184744606164 24.399678515402417 38 24.452723872098964 24.581194717306985 25.63349492579732 25.33258648479674 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 18.0 1 30.5 2 43.0 3 43.0 4 221.5 5 400.0 6 400.0 7 594.0 8 788.0 9 934.0 10 1080.0 11 1080.0 12 1472.0 13 1864.0 14 2452.0 15 3040.0 16 3040.0 17 4352.5 18 5665.0 19 5665.0 20 6852.0 21 8039.0 22 8439.0 23 8839.0 24 8839.0 25 10338.5 26 11838.0 27 11838.0 28 15277.5 29 18717.0 30 22542.0 31 26367.0 32 26367.0 33 33136.5 34 39906.0 35 39906.0 36 44053.0 37 48200.0 38 55114.5 39 62029.0 40 62029.0 41 65391.0 42 68753.0 43 78300.0 44 87847.0 45 87847.0 46 88861.0 47 89875.0 48 89875.0 49 96364.0 50 102853.0 51 104639.5 52 106426.0 53 106426.0 54 101209.0 55 95992.0 56 95992.0 57 93998.0 58 92004.0 59 82365.0 60 72726.0 61 72726.0 62 68784.0 63 64842.0 64 53991.0 65 43140.0 66 43140.0 67 36993.0 68 30846.0 69 30846.0 70 24504.0 71 18162.0 72 14174.0 73 10186.0 74 10186.0 75 7633.0 76 5080.0 77 5080.0 78 4992.5 79 4905.0 80 3890.5 81 2876.0 82 2876.0 83 2671.5 84 2467.0 85 2467.0 86 1623.0 87 779.0 88 623.0 89 467.0 90 467.0 91 285.5 92 104.0 93 70.0 94 36.0 95 36.0 96 20.5 97 5.0 98 5.0 99 12.5 100 20.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007914008146152385 2 1.758668476922752E-4 3 0.0 4 4.39667119230688E-4 5 8.79334238461376E-5 6 8.79334238461376E-5 7 4.39667119230688E-4 8 0.0021983355961534405 9 0.0036052703776916425 10 7.914008146152385E-4 11 0.004748404887691431 12 2.6380027153841286E-4 13 2.6380027153841286E-4 14 0.0 15 0.0 16 8.79334238461376E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 1.758668476922752E-4 24 0.0 25 8.79334238461376E-5 26 8.79334238461376E-5 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 8.79334238461376E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1137224.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.50057443973778 #Duplication Level Percentage of deduplicated Percentage of total 1 77.14604623344312 40.50211743010333 2 14.203276580589469 14.913603588148435 3 4.189050223743416 6.5978262931032425 4 1.695692406421505 3.5609930164092125 5 0.8348065103242425 2.191391066902781 6 0.4458522878884197 1.4044500737648027 7 0.29181651772664985 1.072437436815713 8 0.18050381558297207 0.7581243205336421 9 0.14190104265860767 0.6704897627857176 >10 0.6819163104949241 6.580329325872277 >50 0.08099768093480099 3.018822532644681 >100 0.09008887564768402 10.240104087680521 >500 0.012990342242040018 4.609525762601437 >1k 0.005061172302093514 3.879785302634232 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3669 0.32262773209147894 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2637 0.23188043868226488 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2074 0.1823739210568894 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1976 0.1737564455199679 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1695 0.14904715341920324 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1602 0.14086934500151244 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1564 0.13752787489535923 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1539 0.13532953929920577 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1526 0.13418640478920602 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1488 0.13084493468305275 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1418 0.12468959501382314 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1405 0.12354646050382334 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1378 0.12117225805997762 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1361 0.1196773898545933 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1313 0.11545658550997867 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1282 0.11273064937074842 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1257 0.11053231377459496 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1226 0.10780637763536471 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1210 0.10639944285382652 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1207 0.1061356425822881 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1168 0.10270623905228873 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1144 0.10059583687998142 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.5173369538455047E-4 2 0.0 0.0 0.0 0.0 3.5173369538455047E-4 3 0.0 0.0 0.0 0.0 3.5173369538455047E-4 4 0.0 0.0 0.0 0.0 3.5173369538455047E-4 5 0.0 0.0 0.0 0.0 5.276005430768256E-4 6 0.0 0.0 0.0 0.0 6.155339669229633E-4 7 0.0 0.0 0.0 0.0 7.034673907691009E-4 8 0.0 0.0 0.0 0.0 7.034673907691009E-4 9 0.0 0.0 0.0 0.0 7.034673907691009E-4 10 0.0 0.0 8.793342384613762E-5 8.793342384613762E-5 7.034673907691009E-4 11 0.0 0.0 8.793342384613762E-5 8.793342384613762E-5 7.034673907691009E-4 12 0.0 0.0 8.793342384613762E-5 8.793342384613762E-5 8.793342384613761E-4 13 0.0 0.0 8.793342384613762E-5 1.7586684769227523E-4 0.001143134509999789 14 0.0 0.0 8.793342384613762E-5 1.7586684769227523E-4 0.001143134509999789 15 0.0 0.0 8.793342384613762E-5 1.7586684769227523E-4 0.001582801629230477 16 0.0 0.0 8.793342384613762E-5 2.638002715384128E-4 0.0016707350530766147 17 0.0 0.0 8.793342384613762E-5 3.5173369538455047E-4 0.0018466019007688898 18 0.0 0.0 8.793342384613762E-5 3.5173369538455047E-4 0.002022468748461165 19 0.0 0.0 8.793342384613762E-5 3.5173369538455047E-4 0.0021104021723073025 20 0.0 0.0 8.793342384613762E-5 3.5173369538455047E-4 0.0023742024438457156 21 0.0 0.0 8.793342384613762E-5 4.3966711923068807E-4 0.0023742024438457156 22 0.0 0.0 8.793342384613762E-5 4.3966711923068807E-4 0.002462135867691853 23 0.0 0.0 8.793342384613762E-5 8.793342384613761E-4 0.002462135867691853 24 0.0 0.0 8.793342384613762E-5 0.0021983355961534405 0.0025500692915379907 25 0.0 0.0 8.793342384613762E-5 0.002725936139230266 0.0025500692915379907 26 0.0 0.0 8.793342384613762E-5 0.0029018029869225413 0.002725936139230266 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 285 0.0 20.209665 29 ACGAACG 105 2.8012437E-10 19.80868 15 TTACGCA 50 7.189425E-4 19.202559 4 TCTAGCG 300 0.0 19.199183 28 TCGTTTA 295 0.0 18.982243 30 CGAACGA 110 5.2023097E-10 18.908285 16 ATCGTTT 310 0.0 18.579855 29 CATCGTT 315 0.0 18.284935 28 TAGCGGC 310 0.0 18.063747 30 CGGCATC 325 0.0 17.722322 25 GCATCGT 340 0.0 16.940454 27 GGCATCG 345 0.0 16.69494 26 CGTTTAT 350 0.0 16.456442 31 CGCATCG 360 0.0 16.443745 13 TAGAACA 295 0.0 16.273355 4 CCAGTCG 365 0.0 16.218489 20 CAAGACG 420 0.0 16.002132 4 CAGTCGG 370 0.0 15.999319 21 TAACGAA 140 7.421477E-10 15.999318 13 TGTGTCG 60 0.0024425793 15.999318 10 >>END_MODULE