##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062983_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 762403 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.178157745968996 32.0 32.0 32.0 32.0 32.0 2 30.767883914412717 32.0 32.0 32.0 32.0 32.0 3 30.849963864255518 32.0 32.0 32.0 32.0 32.0 4 30.91439697902553 32.0 32.0 32.0 32.0 32.0 5 30.81581919273665 32.0 32.0 32.0 32.0 32.0 6 34.473626153097506 36.0 36.0 36.0 32.0 36.0 7 34.378189750040335 36.0 36.0 36.0 32.0 36.0 8 34.35130633011675 36.0 36.0 36.0 32.0 36.0 9 34.49805942526459 36.0 36.0 36.0 32.0 36.0 10 34.20253724080309 36.0 36.0 36.0 32.0 36.0 11 34.52084002817408 36.0 36.0 36.0 32.0 36.0 12 34.320153514611036 36.0 36.0 36.0 32.0 36.0 13 34.41171139148193 36.0 36.0 36.0 32.0 36.0 14 34.31431670651873 36.0 36.0 36.0 32.0 36.0 15 34.25408740521745 36.0 36.0 36.0 32.0 36.0 16 34.26801704610291 36.0 36.0 36.0 32.0 36.0 17 34.1994365184817 36.0 36.0 36.0 32.0 36.0 18 34.216977110530785 36.0 36.0 36.0 32.0 36.0 19 34.2113108159333 36.0 36.0 36.0 32.0 36.0 20 34.16933170514807 36.0 36.0 36.0 32.0 36.0 21 34.14486826520882 36.0 36.0 36.0 32.0 36.0 22 34.13705743550327 36.0 36.0 36.0 32.0 36.0 23 34.081725806430455 36.0 36.0 36.0 32.0 36.0 24 34.08224521676856 36.0 36.0 36.0 32.0 36.0 25 34.05972169574359 36.0 36.0 36.0 32.0 36.0 26 34.01103878132694 36.0 36.0 36.0 32.0 36.0 27 34.028579373376026 36.0 36.0 36.0 32.0 36.0 28 34.01592727205953 36.0 36.0 36.0 32.0 36.0 29 33.97472203021237 36.0 36.0 36.0 32.0 36.0 30 33.94961850884637 36.0 36.0 36.0 32.0 36.0 31 33.95581995348917 36.0 36.0 36.0 32.0 36.0 32 33.90243086661516 36.0 36.0 36.0 32.0 36.0 33 33.85312623376351 36.0 36.0 36.0 32.0 36.0 34 33.8616715831391 36.0 36.0 36.0 32.0 36.0 35 33.817764358219996 36.0 36.0 36.0 32.0 36.0 36 33.7620064454101 36.0 36.0 36.0 32.0 36.0 37 33.77863282279844 36.0 36.0 36.0 32.0 36.0 38 33.15920582683961 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 4.0 10 3.0 11 7.0 12 7.0 13 7.0 14 116.0 15 255.0 16 307.0 17 389.0 18 490.0 19 639.0 20 806.0 21 1037.0 22 1697.0 23 2401.0 24 3494.0 25 5312.0 26 7627.0 27 11074.0 28 15385.0 29 20767.0 30 27791.0 31 37549.0 32 51081.0 33 76777.0 34 167683.0 35 329694.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.937885751805645 17.28719632304662 11.200000000000001 25.574917925147734 2 16.537006853072334 20.291760827513077 37.92103349895143 25.250198820463154 3 18.68091793713385 25.169548666042257 28.714132422427387 27.43540097439651 4 12.254109165889496 15.882085204117102 36.721009573953175 35.14279605604022 5 14.126780718334004 37.21693120305141 33.594699915923734 15.061588162690862 6 32.732206893476146 36.42632102224286 17.47752498025976 13.363947104021237 7 29.416725799872246 31.0394896137607 21.51526161360855 18.028522972758502 8 28.005377754459605 32.62749213011543 19.89756033578174 19.46956977964323 9 27.988420791683115 14.00247376380671 18.692131830886897 39.31697361362328 10 15.74752852508988 26.919237826912155 31.993483727024824 25.339749920973137 11 36.897174539506736 21.576780357534016 22.469762811373197 19.056282291586054 12 24.783342668147995 24.420268659026547 28.979418373276282 21.816970299549173 13 29.767581586511156 19.946109677563236 25.224422758297706 25.061885977627906 14 23.69590597247911 19.993309983865252 25.868455918040745 30.442328125614893 15 25.03676745519356 27.12552625675163 23.14335830852651 24.6943479795283 16 25.184242630950664 25.879104301399693 24.350329918274717 24.586323149374927 17 23.590732577665825 25.8485516372796 25.64953295549958 24.911182829554996 18 24.3576491822718 24.98780097487263 26.912361154106478 23.74218868874909 19 25.23506571870819 25.084476742660755 26.231077996694392 23.44937954193667 20 25.593490688053055 24.21617778617283 25.709709662440282 24.48062186333383 21 26.989369739962644 24.221750582408127 24.943464436375848 23.845415241253384 22 25.704500169869704 24.58414715569903 25.50747754637312 24.203875128058147 23 24.15485742994804 24.479127723404787 26.04590943256634 25.320105414080835 24 24.255594356973628 25.4826928475664 25.879263163694468 24.382449631765503 25 24.542252366303057 24.86143270384971 25.888503342013603 24.70781158783363 26 24.248713363830404 25.63498758296065 26.252494230963492 23.863804822245456 27 24.842981797956796 25.22785348116044 25.465807548417224 24.463357172465543 28 23.939859802296052 25.21197557034021 26.32274854660314 24.525416080760593 29 23.935067064572195 25.449513002984293 26.269242121142554 24.346177811300954 30 23.946924523797655 25.532997720314903 26.48304139897637 24.037036356911067 31 24.509546720954514 25.439296076898454 25.252637875218404 24.798519326928627 32 24.10863847732982 25.56113045930648 25.185447533596992 25.144783529766705 33 23.88651168647863 25.051748970923505 25.89337481996081 25.16836452263706 34 24.716713323590913 25.135182644148905 25.99980060396011 24.148303428300068 35 25.35292381358434 25.07835098881637 25.7485815486537 23.820143648945592 36 24.101127133052074 25.904513779568877 25.521587641416367 24.472771445962678 37 24.94015019840619 25.818778080215132 25.25012297904437 23.990948742334307 38 23.999937036959302 25.781922261632424 25.72473083300103 24.493409868407245 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 600.0 1 451.5 2 303.0 3 303.0 4 581.0 5 859.0 6 859.0 7 1018.5 8 1178.0 9 1128.5 10 1079.0 11 1079.0 12 1427.0 13 1775.0 14 2113.5 15 2452.0 16 2452.0 17 3679.5 18 4907.0 19 4907.0 20 5713.5 21 6520.0 22 6613.0 23 6706.0 24 6706.0 25 7575.0 26 8444.0 27 8444.0 28 10749.0 29 13054.0 30 16208.5 31 19363.0 32 19363.0 33 23474.0 34 27585.0 35 27585.0 36 30843.5 37 34102.0 38 38768.5 39 43435.0 40 43435.0 41 46659.5 42 49884.0 43 55459.5 44 61035.0 45 61035.0 46 63125.5 47 65216.0 48 65216.0 49 67643.5 50 70071.0 51 69511.5 52 68952.0 53 68952.0 54 65564.5 55 62177.0 56 62177.0 57 60076.5 58 57976.0 59 51793.5 60 45611.0 61 45611.0 62 42604.0 63 39597.0 64 32870.0 65 26143.0 66 26143.0 67 21610.0 68 17077.0 69 17077.0 70 13648.5 71 10220.0 72 7986.5 73 5753.0 74 5753.0 75 4383.0 76 3013.0 77 3013.0 78 2837.0 79 2661.0 80 2095.0 81 1529.0 82 1529.0 83 1491.5 84 1454.0 85 1454.0 86 986.0 87 518.0 88 439.5 89 361.0 90 361.0 91 267.0 92 173.0 93 158.0 94 143.0 95 143.0 96 129.0 97 115.0 98 115.0 99 238.5 100 362.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11844129679447746 2 0.05364616875851748 3 0.011148959277442508 4 0.002885612989455708 5 0.0 6 1.3116422679344125E-4 7 0.0 8 3.934926803803238E-4 9 2.623284535868825E-4 10 5.24656907173765E-4 11 0.0018362991751081775 12 0.0031479414430425905 13 0.014952721854452304 14 0.009574988555921211 15 0.02360956082281943 16 0.012198273091790038 17 0.021379768967330928 18 0.006164718659291739 19 0.0082633462879868 20 0.006427047112878621 21 0.006689375566465505 22 0.0070828682468458285 23 0.009968481236301537 24 0.015346214534832626 25 0.018100663297494896 26 0.018887648658255544 27 0.009312660102334329 28 0.006689375566465505 29 0.01023080968988842 30 0.0022297918554885013 31 0.006164718659291739 32 0.0076075251540195935 33 0.009050331648747448 34 0.013247586906137568 35 0.01678902102956048 36 0.015083886081245746 37 0.01023080968988842 38 0.006689375566465505 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 762403.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.51736995163134 #Duplication Level Percentage of deduplicated Percentage of total 1 81.54632410941942 50.98061712544209 2 12.388392923709668 15.489794870354585 3 3.351392236170329 6.285606848450566 4 1.1143646999380805 2.7866860082827056 5 0.4719484264577643 1.4752487187475165 6 0.24129424888704817 0.905104909492356 7 0.15172004273581471 0.6639596628554573 8 0.09280234545766869 0.4641406850684935 9 0.06880013660922808 0.38710832338096984 >10 0.42436040256097196 5.426943985565194 >50 0.06913647548609633 3.111603331894263 >100 0.07314056111934615 8.82634988729004 >500 0.00569105230366875 2.324360424978436 >1k 6.323391448520833E-4 0.8724752181973029 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3226 0.42313579563564147 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2162 0.28357705832742003 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1233 0.16172549163631308 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 927 0.12158923823752006 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 908 0.11909711792844467 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 802 0.10519370988833988 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 775 0.10165227576491698 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.3116422679344125E-4 0.0 4 0.0 1.3116422679344125E-4 0.0 1.3116422679344125E-4 0.0 5 0.0 1.3116422679344125E-4 0.0 1.3116422679344125E-4 0.0 6 0.0 1.3116422679344125E-4 0.0 1.3116422679344125E-4 0.0 7 0.0 1.3116422679344125E-4 0.0 1.3116422679344125E-4 0.0 8 0.0 2.623284535868825E-4 0.0 2.623284535868825E-4 0.0 9 0.0 2.623284535868825E-4 0.0 3.934926803803238E-4 0.0 10 0.0 2.623284535868825E-4 0.0 6.558211339672064E-4 0.0 11 0.0 2.623284535868825E-4 0.0 6.558211339672064E-4 0.0 12 0.0 2.623284535868825E-4 0.0 6.558211339672064E-4 3.934926803803238E-4 13 0.0 2.623284535868825E-4 0.0 6.558211339672064E-4 3.934926803803238E-4 14 0.0 3.934926803803238E-4 0.0 6.558211339672064E-4 3.934926803803238E-4 15 0.0 3.934926803803238E-4 0.0 9.181495875540889E-4 3.934926803803238E-4 16 0.0 3.934926803803238E-4 0.0 9.181495875540889E-4 3.934926803803238E-4 17 0.0 3.934926803803238E-4 0.0 9.181495875540889E-4 3.934926803803238E-4 18 0.0 3.934926803803238E-4 0.0 9.181495875540889E-4 5.24656907173765E-4 19 0.0 3.934926803803238E-4 0.0 9.181495875540889E-4 5.24656907173765E-4 20 0.0 3.934926803803238E-4 0.0 0.00104931381434753 7.869853607606476E-4 21 0.0 3.934926803803238E-4 0.0 0.0011804780411409713 9.181495875540889E-4 22 0.0 3.934926803803238E-4 0.0 0.0011804780411409713 0.00104931381434753 23 0.0 3.934926803803238E-4 0.0 0.0026232845358688255 0.0011804780411409713 24 0.0 3.934926803803238E-4 0.0 0.004721912164563885 0.0013116422679344127 25 0.0 5.24656907173765E-4 0.0 0.0055088975253245335 0.0013116422679344127 26 0.0 5.24656907173765E-4 0.0 0.00721403247363927 0.001442806494727854 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACTAA 60 1.1302485E-4 18.682331 1 CGAGCCG 200 0.0 18.400942 15 CGTTAGG 45 0.008845001 17.77869 15 TAGTACT 45 0.008858382 17.774027 4 CCTATTC 200 0.0 17.596285 3 AAATCGC 110 1.0608346E-8 17.45544 14 ATCTAAC 65 2.0858199E-4 17.245228 1 GTCCTAT 225 0.0 17.080988 1 CAAATCG 105 1.1868178E-7 16.762764 13 AGGCCCG 250 0.0 16.640852 10 GTTATAT 90 8.505202E-6 16.013428 1 CGTCTTA 60 0.0024400586 16.000818 15 TAGACTG 110 2.0228981E-7 15.995573 5 CCGAGCC 245 0.0 15.674273 14 CTAGCGG 145 1.2187229E-9 15.448054 29 TATTCCA 270 0.0 15.403144 5 GAGCCGC 250 0.0 15.360786 16 AATCGCT 115 3.3385004E-7 15.305132 15 GTTCAAA 285 0.0 15.170615 1 GTATTAG 180 7.2759576E-12 15.123793 1 >>END_MODULE