##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062972_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2314466 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.176982941205445 32.0 32.0 32.0 32.0 32.0 2 31.21607100730795 32.0 32.0 32.0 32.0 32.0 3 31.332801173143178 32.0 32.0 32.0 32.0 32.0 4 31.44600698390039 32.0 32.0 32.0 32.0 32.0 5 31.3400641875923 32.0 32.0 32.0 32.0 32.0 6 34.87886968311481 36.0 36.0 36.0 36.0 36.0 7 34.90725765684179 36.0 36.0 36.0 36.0 36.0 8 34.83369727617515 36.0 36.0 36.0 32.0 36.0 9 34.9623757704801 36.0 36.0 36.0 32.0 36.0 10 34.78669636970256 36.0 36.0 36.0 32.0 36.0 11 34.97898521732443 36.0 36.0 36.0 36.0 36.0 12 34.86921994101447 36.0 36.0 36.0 32.0 36.0 13 34.93572513054847 36.0 36.0 36.0 36.0 36.0 14 34.875938985493846 36.0 36.0 36.0 32.0 36.0 15 34.83179532557402 36.0 36.0 36.0 32.0 36.0 16 34.84954239984515 36.0 36.0 36.0 32.0 36.0 17 34.79899769536472 36.0 36.0 36.0 32.0 36.0 18 34.81389313992947 36.0 36.0 36.0 32.0 36.0 19 34.8121484610273 36.0 36.0 36.0 32.0 36.0 20 34.79156142280768 36.0 36.0 36.0 32.0 36.0 21 34.78777437214459 36.0 36.0 36.0 32.0 36.0 22 34.777788483390985 36.0 36.0 36.0 32.0 36.0 23 34.714612355506624 36.0 36.0 36.0 32.0 36.0 24 34.68313943691547 36.0 36.0 36.0 32.0 36.0 25 34.668565448790346 36.0 36.0 36.0 32.0 36.0 26 34.597564189752624 36.0 36.0 36.0 32.0 36.0 27 34.58242290014198 36.0 36.0 36.0 32.0 36.0 28 34.55027423172343 36.0 36.0 36.0 32.0 36.0 29 34.50983250564061 36.0 36.0 36.0 32.0 36.0 30 34.487143902740414 36.0 36.0 36.0 32.0 36.0 31 34.49217054819557 36.0 36.0 36.0 32.0 36.0 32 34.47101534436021 36.0 36.0 36.0 32.0 36.0 33 34.43406945705834 36.0 36.0 36.0 32.0 36.0 34 34.43130337624316 36.0 36.0 36.0 32.0 36.0 35 34.39549425223788 36.0 36.0 36.0 32.0 36.0 36 34.369680090353455 36.0 36.0 36.0 32.0 36.0 37 34.36700647147117 36.0 36.0 36.0 32.0 36.0 38 33.90480655148963 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 1.0 20 10.0 21 51.0 22 172.0 23 545.0 24 1503.0 25 3719.0 26 8173.0 27 15702.0 28 27495.0 29 43877.0 30 65853.0 31 96375.0 32 140199.0 33 228127.0 34 549516.0 35 1133147.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.73040427260314 17.92384672554747 11.730473408576318 26.61527559327307 2 16.57349902742144 19.353794784628505 35.71273027990042 28.359975908049634 3 18.933913913619815 22.638872206375034 27.616867130474155 30.810346749530993 4 12.372416409335557 15.03536673517788 34.6164531470151 37.97576370847147 5 15.176609001742522 35.93637055334218 32.253572426951735 16.633448017963563 6 36.73227871864878 34.33483274521995 15.300525435057722 13.632363101073553 7 32.111635688198135 29.313527967899166 19.334081384964165 19.24075495893853 8 29.4305447836485 32.17544033995778 17.993825626888984 20.400189249504734 9 27.064233661165733 13.922175740172158 17.778303953432303 41.235286645229806 10 16.452727502902427 25.560231986702632 29.8173685850116 28.169671925383344 11 39.432948820818204 20.536053395346183 20.699122305571436 19.331875478264177 12 25.719617413831912 22.915117528545547 26.957530895989084 24.407734161633453 13 29.600602818018697 18.225393968276872 24.981215945124205 27.192787268580226 14 23.899033297529538 19.20291764925473 23.59632848354653 33.3017205696692 15 25.867953990250882 26.814435813703895 21.111176400949503 26.206433795095712 16 27.224618745420102 25.175850650517788 22.151781146736347 25.44774945732576 17 24.978807206500335 25.60646818747824 23.765741212011758 25.64898339400968 18 26.382629945741265 23.688358351343247 25.001663450662054 24.927348252253438 19 26.20198352449334 24.275750864346247 24.41033914518511 25.111926465975305 20 26.600736411768416 23.35510653429344 23.84541401774751 26.198743036190635 21 27.87650709775261 23.305256290330593 23.607615582866885 25.21062102904991 22 26.697012052461368 23.30560194256556 24.44448285024833 25.552903154724742 23 24.73624539957882 23.095993798990865 25.24638555310046 26.92137524832985 24 25.48345925150769 24.296144337397912 24.437300007863584 25.78309640323081 25 25.59438142292063 23.81781534825543 24.51365650377085 26.074146725053087 26 25.28628658730488 25.082308474013853 24.811360211262738 24.82004472741853 27 26.24860334954154 23.76085887630235 24.185103604892014 25.805434169264096 28 25.13340010179454 23.77049392818905 25.322817444715106 25.773288525301304 29 24.957290364170394 24.187825615066284 25.230355511811364 25.624528508951954 30 24.920219177987494 24.376465240794204 25.4368826329702 25.26643294824811 31 25.773850209940434 24.299255206168507 23.965009639372536 25.96188494451852 32 25.64034209186914 23.914112369764776 23.81292272169909 26.632622816666995 33 24.893474347862533 23.786480337149044 24.724882543100655 26.59516277188777 34 26.126069685188725 23.83081021713 24.73335101919838 25.309769078482898 35 26.6133527128936 23.569454033889457 24.955821342806505 24.861371910410433 36 24.862452073178005 24.650394518649225 24.3699842641888 26.117169143983972 37 26.588249730175338 24.149674266115813 24.147600353602083 25.114475650106765 38 25.274221040283606 23.647581622534798 24.88821390688561 26.18998343029599 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 35.0 1 52.5 2 70.0 3 70.0 4 269.5 5 469.0 6 469.0 7 708.5 8 948.0 9 1077.5 10 1207.0 11 1207.0 12 1614.5 13 2022.0 14 2930.5 15 3839.0 16 3839.0 17 5816.0 18 7793.0 19 7793.0 20 9303.0 21 10813.0 22 11643.5 23 12474.0 24 12474.0 25 14262.0 26 16050.0 27 16050.0 28 20885.5 29 25721.0 30 32180.5 31 38640.0 32 38640.0 33 52545.5 34 66451.0 35 66451.0 36 74643.0 37 82835.0 38 96534.5 39 110234.0 40 110234.0 41 118041.0 42 125848.0 43 147559.5 44 169271.0 45 169271.0 46 172145.0 47 175019.0 48 175019.0 49 192323.5 50 209628.0 51 218306.5 52 226985.0 53 226985.0 54 220569.0 55 214153.0 56 214153.0 57 210324.0 58 206495.0 59 186829.5 60 167164.0 61 167164.0 62 160517.0 63 153870.0 64 129246.5 65 104623.0 66 104623.0 67 88790.5 68 72958.0 69 72958.0 70 58823.5 71 44689.0 72 34653.5 73 24618.0 74 24618.0 75 18557.5 76 12497.0 77 12497.0 78 12054.0 79 11611.0 80 9066.0 81 6521.0 82 6521.0 83 6124.0 84 5727.0 85 5727.0 86 3741.5 87 1756.0 88 1418.0 89 1080.0 90 1080.0 91 649.0 92 218.0 93 145.0 94 72.0 95 72.0 96 50.5 97 29.0 98 29.0 99 31.0 100 33.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008036410990699367 2 0.0 3 0.0 4 1.296195321080543E-4 5 1.296195321080543E-4 6 1.296195321080543E-4 7 3.888585963241629E-4 8 0.0026355971528637706 9 0.0031108687705933033 10 9.937497461617495E-4 11 0.00462309664518727 12 3.024455749187934E-4 13 1.296195321080543E-4 14 0.0 15 0.0 16 8.641302140536953E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 4.3206510702684765E-5 22 4.3206510702684765E-5 23 1.7282604281073906E-4 24 0.0 25 4.3206510702684765E-5 26 8.641302140536953E-5 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 4.3206510702684765E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2314466.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.47992418171516 #Duplication Level Percentage of deduplicated Percentage of total 1 69.72860209108275 28.226085259440147 2 15.840844067784243 12.82472333676557 3 6.055502580755974 7.353788560535469 4 2.859893750488907 4.630731287502078 5 1.5921198752363315 3.2224445918884252 6 0.9458850664068678 2.2973613463659968 7 0.6143752362631234 1.7408904088138202 8 0.41331040831430327 1.3384619193661382 9 0.304252528915705 1.1084507372342554 >10 1.4066492785626747 10.01704710872459 >50 0.10345449901332773 2.915188128078496 >100 0.10168630954603307 8.848093786993966 >500 0.0200975740410633 5.579418471717726 >1k 0.013111786272779261 9.436507392827382 >5k 2.14947315947201E-4 0.4608076637460069 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5356 0.2314140713235796 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 5236 0.22622929003925743 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 4956 0.2141314670425057 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 4285 0.18513989836100422 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3673 0.15869751381096114 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 3577 0.15454968878350342 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3521 0.15213012418415306 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 3506 0.15148202652361278 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3475 0.15014262469182957 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 3362 0.14526028898242618 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 3273 0.14141490952988725 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3163 0.13666219335259192 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3055 0.13199589019670194 No Hit ACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGG 3044 0.13152061857897243 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 2992 0.12927388002243284 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 2769 0.11963882813573411 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCC 2756 0.11907714349659923 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2754 0.11899073047519386 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2740 0.11838583932535626 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2693 0.11635513332233008 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 2613 0.1128986124661153 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTAT 2586 0.11173203667714281 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACG 2571 0.11108393901660253 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2523 0.10901002650287367 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 2378 0.10274508245098438 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.3206510702684765E-5 2 0.0 0.0 0.0 0.0 4.3206510702684765E-5 3 0.0 0.0 0.0 0.0 4.3206510702684765E-5 4 0.0 0.0 0.0 0.0 4.3206510702684765E-5 5 0.0 0.0 0.0 4.3206510702684765E-5 4.3206510702684765E-5 6 0.0 0.0 0.0 4.3206510702684765E-5 4.3206510702684765E-5 7 0.0 0.0 0.0 4.3206510702684765E-5 4.3206510702684765E-5 8 0.0 0.0 0.0 4.3206510702684765E-5 4.3206510702684765E-5 9 0.0 0.0 0.0 4.3206510702684765E-5 4.3206510702684765E-5 10 0.0 0.0 0.0 4.3206510702684765E-5 4.3206510702684765E-5 11 0.0 0.0 0.0 4.3206510702684765E-5 4.3206510702684765E-5 12 0.0 0.0 0.0 4.3206510702684765E-5 3.024455749187934E-4 13 0.0 0.0 0.0 4.3206510702684765E-5 3.888585963241629E-4 14 0.0 0.0 0.0 8.641302140536953E-5 3.888585963241629E-4 15 0.0 0.0 0.0 1.296195321080543E-4 4.7527161772953244E-4 16 0.0 0.0 0.0 1.296195321080543E-4 5.184781284322172E-4 17 0.0 0.0 0.0 1.7282604281073906E-4 5.184781284322172E-4 18 0.0 0.0 0.0 1.7282604281073906E-4 5.184781284322172E-4 19 0.0 0.0 0.0 1.7282604281073906E-4 5.184781284322172E-4 20 0.0 0.0 0.0 2.592390642161086E-4 6.480976605402715E-4 21 0.0 0.0 0.0 4.3206510702684765E-4 7.777171926483258E-4 22 0.0 0.0 0.0 6.048911498375868E-4 7.777171926483258E-4 23 0.0 0.0 0.0 0.0010369562568644344 7.777171926483258E-4 24 0.0 0.0 0.0 0.0013826083424859125 7.777171926483258E-4 25 0.0 0.0 0.0 0.0015554343852966516 7.777171926483258E-4 26 0.0 0.0 0.0 0.0021171190244315533 7.777171926483258E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 265 0.0 22.340437 4 TCTAGCG 805 0.0 18.682701 28 CTAGCGG 805 0.0 18.682701 29 TAAACGC 675 0.0 17.303213 28 AAACGCT 710 0.0 17.126274 29 CAAGACG 1005 0.0 16.876236 4 AACGCTT 710 0.0 16.675583 30 GTAATAC 135 4.4383341E-10 16.592838 3 GTATCAA 3890 0.0 16.57644 1 GACGGAC 1065 0.0 16.226646 7 AAGACGG 1075 0.0 16.2249 5 TAGCGGC 930 0.0 16.171583 30 GCGCAAG 1060 0.0 15.849635 1 ACGCTTC 740 0.0 15.783337 31 ACCGTCG 715 0.0 15.665585 8 CGCAAGA 1055 0.0 15.621084 2 GTAAACG 755 0.0 15.469759 27 TACCGTC 740 0.0 15.352575 7 GCGAAAG 1135 0.0 15.224237 18 ACACGCT 1085 0.0 15.189822 9 >>END_MODULE