##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062971_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2831308 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.223049911913503 32.0 32.0 32.0 32.0 32.0 2 30.800960192250365 32.0 32.0 32.0 32.0 32.0 3 30.848758241773766 32.0 32.0 32.0 32.0 32.0 4 30.9253334501227 32.0 32.0 32.0 32.0 32.0 5 30.82845207939228 32.0 32.0 32.0 32.0 32.0 6 34.48443899427402 36.0 36.0 36.0 32.0 36.0 7 34.416842674834385 36.0 36.0 36.0 32.0 36.0 8 34.39947473040729 36.0 36.0 36.0 32.0 36.0 9 34.549834210901814 36.0 36.0 36.0 32.0 36.0 10 34.241528650362305 36.0 36.0 36.0 32.0 36.0 11 34.54124807332865 36.0 36.0 36.0 32.0 36.0 12 34.34774033768138 36.0 36.0 36.0 32.0 36.0 13 34.439713023097454 36.0 36.0 36.0 32.0 36.0 14 34.335829235109706 36.0 36.0 36.0 32.0 36.0 15 34.26949134463647 36.0 36.0 36.0 32.0 36.0 16 34.29144868732049 36.0 36.0 36.0 32.0 36.0 17 34.214833921283024 36.0 36.0 36.0 32.0 36.0 18 34.240205940152045 36.0 36.0 36.0 32.0 36.0 19 34.2320288008228 36.0 36.0 36.0 32.0 36.0 20 34.21039568990728 36.0 36.0 36.0 32.0 36.0 21 34.19929446036955 36.0 36.0 36.0 32.0 36.0 22 34.174518279184035 36.0 36.0 36.0 32.0 36.0 23 34.125277433610194 36.0 36.0 36.0 32.0 36.0 24 34.10680046112962 36.0 36.0 36.0 32.0 36.0 25 34.08357727241261 36.0 36.0 36.0 32.0 36.0 26 34.04151438133894 36.0 36.0 36.0 32.0 36.0 27 34.04240089739442 36.0 36.0 36.0 32.0 36.0 28 34.02821840647503 36.0 36.0 36.0 32.0 36.0 29 33.99944972429704 36.0 36.0 36.0 32.0 36.0 30 33.97292170261942 36.0 36.0 36.0 32.0 36.0 31 33.986424295767186 36.0 36.0 36.0 32.0 36.0 32 33.941128270043386 36.0 36.0 36.0 32.0 36.0 33 33.90592228044423 36.0 36.0 36.0 32.0 36.0 34 33.908469159837075 36.0 36.0 36.0 32.0 36.0 35 33.87070075032459 36.0 36.0 36.0 32.0 36.0 36 33.83538880263115 36.0 36.0 36.0 32.0 36.0 37 33.83202675229964 36.0 36.0 36.0 32.0 36.0 38 33.238531095875125 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 1.0 7 5.0 8 4.0 9 6.0 10 18.0 11 37.0 12 16.0 13 19.0 14 368.0 15 753.0 16 955.0 17 1177.0 18 1471.0 19 1878.0 20 2615.0 21 3850.0 22 5768.0 23 8736.0 24 13336.0 25 19812.0 26 28927.0 27 41027.0 28 56886.0 29 76092.0 30 101558.0 31 136982.0 32 185841.0 33 277898.0 34 613521.0 35 1251750.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.68233157419024 17.132054548052047 11.303967761145051 25.881646116612657 2 16.822787256997685 19.94227772914777 37.394341634281666 25.840593379572873 3 18.890519663789558 24.39719318324317 28.350580102544537 28.361707050422737 4 12.809052737465526 15.538076710068266 35.95473631267237 35.698134239793845 5 14.795621935812456 36.33020484957954 33.41327313948342 15.46090007512458 6 33.68363165908534 35.54418975587548 17.153916167867706 13.61826241717147 7 29.991978969430022 30.48584982130161 21.19438125219201 18.32778995707636 8 28.11528273231378 32.41503902800834 19.721506021968708 19.74817221770918 9 27.893174235740304 14.24789725716296 18.44829693194156 39.41063157515517 10 15.924492609222835 26.357795485393808 31.549511372695004 26.168200532688353 11 37.24989068479003 21.318408540078593 22.464469907765512 18.96723086736586 12 25.328963982880982 23.679684886853344 28.431742026541755 22.559609103723922 13 29.56657631781507 19.52665585494823 25.106442203993883 25.800325623242813 14 24.04047019062374 19.631567681211944 25.217960157144663 31.110001971019653 15 25.21491712433928 26.66244145288004 22.617541137543427 25.50510028523726 16 25.83868400499761 25.71275468013775 23.48742631898163 24.96113499588301 17 24.26332605126089 25.60299657752016 25.031052433747742 25.10262493747121 18 25.041723490086497 24.67144848769347 26.043687717204982 24.24314030501505 19 25.760904081244107 24.731930261070627 25.547875310880364 23.959290346804902 20 25.952562354143772 24.116438436000927 24.9648638157172 24.966135394138096 21 27.199768855300384 24.05074021758826 24.543406212437663 24.206084714673697 22 26.163834134848884 24.01738549925029 24.901071846758942 24.917708519141886 23 24.577598195416268 23.932175514559628 25.595573033398296 25.89465325662581 24 24.94558210020241 24.85479728846609 25.20090996760713 24.99871064372437 25 24.989985198582737 24.323497514845574 25.309964285840447 25.37655300073124 26 24.880342209446795 25.137197119805453 25.629004857670022 24.353455813077733 27 25.539968456877233 24.59604139107644 24.7655547686455 25.09843538340083 28 24.6796595986972 24.559636809202264 25.703350147591298 25.05735344450924 29 24.69369935168747 24.82393408504713 25.53469711858743 24.947669444677967 30 24.54478987856825 24.962101143676577 25.75402123466209 24.739087743093084 31 25.127307599249065 24.853989654325915 24.67148334501887 25.34721940140615 32 24.91798217790167 24.826568687983293 24.5651148037577 25.690334330357334 33 24.557884883700392 24.405750516592782 25.25896752088448 25.777397078822347 34 25.333847651586122 24.603098908769265 25.30505854609012 24.757994893554493 35 25.83594389171729 24.377811030898556 25.334744942440544 24.45150013494361 36 24.67117836026149 25.12277161829631 24.959182101872713 25.24686791956949 37 25.567631702670806 24.928956625834463 24.884838204786476 24.618573466708256 38 24.648259195170272 24.80921948915858 25.376766121549217 25.16575519412193 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1181.0 1 901.5 2 622.0 3 622.0 4 1293.0 5 1964.0 6 1964.0 7 2331.5 8 2699.0 9 2528.5 10 2358.0 11 2358.0 12 3290.5 13 4223.0 14 5454.5 15 6686.0 16 6686.0 17 10121.5 18 13557.0 19 13557.0 20 16535.0 21 19513.0 22 20258.0 23 21003.0 24 21003.0 25 24454.0 26 27905.0 27 27905.0 28 35111.0 29 42317.0 30 52081.0 31 61845.0 32 61845.0 33 77634.5 34 93424.0 35 93424.0 36 104363.0 37 115302.0 38 132129.0 39 148956.0 40 148956.0 41 161768.5 42 174581.0 43 196694.5 44 218808.0 45 218808.0 46 225668.0 47 232528.0 48 232528.0 49 249040.0 50 265552.0 51 267690.5 52 269829.0 53 269829.0 54 259022.5 55 248216.0 56 248216.0 57 239709.5 58 231203.0 59 207810.0 60 184417.0 61 184417.0 62 172166.5 63 159916.0 64 132652.5 65 105389.0 66 105389.0 67 87735.5 68 70082.0 69 70082.0 70 56235.5 71 42389.0 72 33068.5 73 23748.0 74 23748.0 75 17960.5 76 12173.0 77 12173.0 78 11378.5 79 10584.0 80 8301.0 81 6018.0 82 6018.0 83 5947.0 84 5876.0 85 5876.0 86 3929.5 87 1983.0 88 1725.5 89 1468.0 90 1468.0 91 1075.0 92 682.0 93 612.5 94 543.0 95 543.0 96 489.5 97 436.0 98 436.0 99 884.0 100 1332.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12065095002027332 2 0.05478033474281145 3 0.012114542112691378 4 0.002684271721762521 5 3.8851301236036485E-4 6 2.472355533202322E-4 7 3.531936476003317E-5 8 2.8255491808026537E-4 9 2.11916188560199E-4 10 3.1787428284029854E-4 11 0.0016246907789615257 12 0.002507674897962355 13 0.01515200748205423 14 0.010101338321369486 15 0.02408780676634262 16 0.012538374489811776 17 0.0216154512331403 18 0.005968972644445606 19 0.008300050718607795 20 0.006392805021566004 21 0.006392805021566004 22 0.007523024693887066 23 0.010419212604209785 24 0.015469881764894527 25 0.01758904365049652 26 0.01861330522853748 27 0.009288992931888724 28 0.006322166292045938 29 0.009394951026168824 30 0.0031081040988829188 31 0.0061102501034857384 32 0.0076289827881671655 33 0.009112396108088559 34 0.013280081149772473 35 0.017518404920976453 36 0.015611159223934664 37 0.010277935145169654 38 0.006180888833005805 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2831308.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.09759287782421 #Duplication Level Percentage of deduplicated Percentage of total 1 75.50922879803036 37.828306028422055 2 13.827961420204215 13.854951631193016 3 4.5804719426076845 6.884118557071692 4 2.109829298656738 4.227894769832426 5 1.0910728112916495 2.7330060750076095 6 0.6507233495696145 1.9559804065699584 7 0.42332393288387166 1.4845257031538912 8 0.3184790091273304 1.276402539151509 9 0.22478993269260825 1.0135291077961017 >10 1.1103817163498282 9.70127209608828 >50 0.07053877447909629 2.4553154780002444 >100 0.06511913271018997 6.953784838368751 >500 0.01148604229931988 3.943672672314988 >1k 0.006452036106379401 5.189676740426212 >5k 1.4180299134899786E-4 0.4975633566033591 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 8627 0.30470015978480613 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 5381 0.1900535017737385 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3015 0.10648788475150002 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 2997 0.10585213618581943 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2963 0.10465127778397829 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2954 0.10433340350113798 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2837 0.10020103782421412 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.531936476003317E-5 0.0 3 0.0 0.0 0.0 3.531936476003317E-5 0.0 4 0.0 0.0 0.0 3.531936476003317E-5 0.0 5 0.0 0.0 0.0 3.531936476003317E-5 3.531936476003317E-5 6 3.531936476003317E-5 0.0 0.0 3.531936476003317E-5 3.531936476003317E-5 7 3.531936476003317E-5 0.0 0.0 3.531936476003317E-5 3.531936476003317E-5 8 3.531936476003317E-5 0.0 0.0 3.531936476003317E-5 3.531936476003317E-5 9 3.531936476003317E-5 0.0 0.0 3.531936476003317E-5 3.531936476003317E-5 10 3.531936476003317E-5 0.0 0.0 3.531936476003317E-5 3.531936476003317E-5 11 3.531936476003317E-5 0.0 0.0 1.0595809428009952E-4 3.531936476003317E-5 12 3.531936476003317E-5 0.0 0.0 1.0595809428009952E-4 1.4127745904013268E-4 13 3.531936476003317E-5 0.0 0.0 1.0595809428009952E-4 2.1191618856019904E-4 14 3.531936476003317E-5 0.0 0.0 1.0595809428009952E-4 2.1191618856019904E-4 15 3.531936476003317E-5 0.0 0.0 1.4127745904013268E-4 2.472355533202322E-4 16 1.0595809428009952E-4 0.0 0.0 2.1191618856019904E-4 2.472355533202322E-4 17 1.0595809428009952E-4 0.0 0.0 2.8255491808026537E-4 2.472355533202322E-4 18 1.0595809428009952E-4 0.0 0.0 2.8255491808026537E-4 2.8255491808026537E-4 19 1.0595809428009952E-4 0.0 0.0 3.1787428284029854E-4 3.1787428284029854E-4 20 1.0595809428009952E-4 0.0 0.0 3.885130123603649E-4 3.1787428284029854E-4 21 1.0595809428009952E-4 0.0 0.0 4.944711066404644E-4 3.531936476003317E-4 22 1.0595809428009952E-4 0.0 0.0 5.651098361605307E-4 3.531936476003317E-4 23 1.0595809428009952E-4 0.0 0.0 0.001236177766601161 3.531936476003317E-4 24 1.0595809428009952E-4 0.0 0.0 0.0019778844265618575 3.531936476003317E-4 25 1.0595809428009952E-4 3.531936476003317E-5 0.0 0.0024017168036822556 3.531936476003317E-4 26 1.0595809428009952E-4 3.531936476003317E-5 0.0 0.0031434234636429524 3.885130123603649E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGAACG 50 7.2000845E-4 19.199768 9 GTAATAC 185 0.0 16.431652 3 ACCGTCG 610 0.0 15.998393 8 TACCGTC 640 0.0 15.748418 7 GTATTAC 180 7.2759576E-12 15.125355 1 ATACCGT 680 0.0 15.056513 6 GTATCAA 6065 0.0 14.998461 1 TAATACT 485 0.0 14.842559 4 CGTCGTA 690 0.0 14.376891 10 GGTATAG 160 4.84215E-9 14.013196 1 CTAGCGG 620 0.0 13.934823 29 TAGCGGC 635 0.0 13.605654 30 CCGTCGT 730 0.0 13.588877 9 TCTAGCG 650 0.0 13.53782 28 AACCGCG 380 0.0 13.47233 7 TAATACG 85 0.0016116055 13.173983 4 TAACGAA 415 0.0 13.108506 13 CGCGGTC 405 0.0 13.037109 10 GTATAGG 210 9.640644E-11 12.964589 1 CAAGACG 915 0.0 12.9374485 4 >>END_MODULE