##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062971_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2831308 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.186136231028204 32.0 32.0 32.0 32.0 32.0 2 31.289028604447132 32.0 32.0 32.0 32.0 32.0 3 31.36895456093085 32.0 32.0 32.0 32.0 32.0 4 31.47277654003026 32.0 32.0 32.0 32.0 32.0 5 31.396836727053362 32.0 32.0 32.0 32.0 32.0 6 34.91712487655882 36.0 36.0 36.0 36.0 36.0 7 34.94177743996767 36.0 36.0 36.0 36.0 36.0 8 34.88512447250529 36.0 36.0 36.0 32.0 36.0 9 34.98793773054715 36.0 36.0 36.0 36.0 36.0 10 34.84054295753058 36.0 36.0 36.0 32.0 36.0 11 35.01554158007536 36.0 36.0 36.0 36.0 36.0 12 34.914608725013316 36.0 36.0 36.0 32.0 36.0 13 34.967607904191276 36.0 36.0 36.0 36.0 36.0 14 34.911828384619405 36.0 36.0 36.0 32.0 36.0 15 34.87997031760585 36.0 36.0 36.0 32.0 36.0 16 34.88739692043395 36.0 36.0 36.0 32.0 36.0 17 34.86171938905976 36.0 36.0 36.0 32.0 36.0 18 34.8563557903273 36.0 36.0 36.0 32.0 36.0 19 34.85095722542373 36.0 36.0 36.0 32.0 36.0 20 34.83660873348996 36.0 36.0 36.0 32.0 36.0 21 34.83315061448631 36.0 36.0 36.0 32.0 36.0 22 34.82115086030909 36.0 36.0 36.0 32.0 36.0 23 34.760889666542816 36.0 36.0 36.0 32.0 36.0 24 34.73596514402531 36.0 36.0 36.0 32.0 36.0 25 34.72678069641311 36.0 36.0 36.0 32.0 36.0 26 34.65893149032179 36.0 36.0 36.0 32.0 36.0 27 34.63949029918327 36.0 36.0 36.0 32.0 36.0 28 34.608400781546905 36.0 36.0 36.0 32.0 36.0 29 34.57956040105845 36.0 36.0 36.0 32.0 36.0 30 34.5574974534738 36.0 36.0 36.0 32.0 36.0 31 34.550936528275976 36.0 36.0 36.0 32.0 36.0 32 34.52332702764941 36.0 36.0 36.0 32.0 36.0 33 34.486507296274375 36.0 36.0 36.0 32.0 36.0 34 34.479024535656315 36.0 36.0 36.0 32.0 36.0 35 34.4468817945628 36.0 36.0 36.0 32.0 36.0 36 34.426891034108614 36.0 36.0 36.0 32.0 36.0 37 34.4157520128506 36.0 36.0 36.0 32.0 36.0 38 33.99370397003788 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 8.0 20 21.0 21 72.0 22 282.0 23 737.0 24 2031.0 25 4848.0 26 10247.0 27 19439.0 28 33593.0 29 52406.0 30 78875.0 31 112919.0 32 160954.0 33 257266.0 34 628850.0 35 1468760.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.029279108236025 18.322940888281185 11.948692063723062 26.699087939759732 2 15.793336507366911 20.98436482360803 36.66997726845684 26.552321400568218 3 17.84288392502688 25.152544336398584 28.668163265882768 28.336408472691772 4 12.281752661139418 16.4341826704708 35.99822837941218 35.2858362889776 5 14.311063516271288 36.8473771468008 33.10617079185365 15.735388545074253 6 33.75783782791021 35.964985707983715 16.782991282099644 13.494185182006435 7 29.748432870929598 30.723252847110082 21.130459168464434 18.397855113495886 8 27.978337437536293 32.61029427347131 19.56482733385042 19.846540955141982 9 27.760119327872967 14.092585064024293 18.3113396446937 39.835955963409035 10 15.748787390628516 26.599667784060344 31.541123819487293 26.11042100582385 11 37.27817924102783 21.27172820009812 22.396068623195138 19.054023935678913 12 25.18779359304913 23.82824144385971 28.397061420548862 22.586903542542295 13 29.526072996124398 19.510571288605487 25.136606810791225 25.826748904478897 14 23.904675860061854 19.605602781470612 25.238829544507347 31.25089181396019 15 25.209832346039356 26.75759754855353 22.437191573647233 25.595378531759877 16 25.807093059273416 25.713955729923644 23.47696449302671 25.00198671777623 17 24.274504928464157 25.62780170860959 24.980291794463902 25.11740156846235 18 25.059018658514017 24.645111022891186 26.03199651892341 24.26387379967139 19 25.72538911344156 24.752693807950248 25.53907946433239 23.982837614275805 20 25.909191087652772 24.047507371151426 24.971426633909132 25.071874907286666 21 27.06048977415008 24.125730007893885 24.590780576447962 24.222999641508068 22 26.034301472782712 24.000152579709656 25.06640925904538 24.899136688462253 23 24.532812112589898 23.869972189473255 25.618355088930816 25.978860609006034 24 24.930950641894135 24.752623169220726 25.280117881911824 25.036308306973314 25 24.962420195895323 24.22269142036119 25.45106360735038 25.363824776393102 26 24.915092127161195 24.967541457928927 25.649841910299987 24.467524504609887 27 25.488581775130708 24.552300404018357 24.73853948017647 25.220578340674464 28 24.654258738364035 24.473176355239346 25.822340769707854 25.050224136688765 29 24.772366694121587 24.64814848826055 25.599581536166323 24.97990328145154 30 24.60463503087619 24.765514737358142 25.849218806290235 24.780631425475434 31 25.17009806068432 24.642356112439902 24.78412804258668 25.4034177842891 32 24.966941074584607 24.64747742033011 24.70995737659061 25.675624128494672 33 24.586975348496175 24.219371400073747 25.421077466669118 25.772575784760964 34 25.226573724935612 24.41373386434821 25.52046615910385 24.839226251612327 35 25.86359378774757 24.209658574764738 25.380142322912235 24.546605314575455 36 24.674743969924855 24.991982504199473 25.14516258916374 25.188110936711936 37 25.578319278580786 24.773496913793906 24.971532592003413 24.6766512156219 38 24.760004916455575 24.56666671375915 25.478330156945127 25.19499821284014 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 629.0 1 493.0 2 357.0 3 357.0 4 1149.0 5 1941.0 6 1941.0 7 2274.0 8 2607.0 9 2577.0 10 2547.0 11 2547.0 12 3444.0 13 4341.0 14 5613.0 15 6885.0 16 6885.0 17 10600.0 18 14315.0 19 14315.0 20 17206.5 21 20098.0 22 20644.0 23 21190.0 24 21190.0 25 24412.0 26 27634.0 27 27634.0 28 35106.5 29 42579.0 30 52021.5 31 61464.0 32 61464.0 33 77741.0 34 94018.0 35 94018.0 36 104720.5 37 115423.0 38 132000.0 39 148577.0 40 148577.0 41 161919.5 42 175262.0 43 197617.5 44 219973.0 45 219973.0 46 225999.0 47 232025.0 48 232025.0 49 249293.0 50 266561.0 51 268359.0 52 270157.0 53 270157.0 54 259155.5 55 248154.0 56 248154.0 57 240640.5 58 233127.0 59 208967.0 60 184807.0 61 184807.0 62 173425.0 63 162043.0 64 133533.5 65 105024.0 66 105024.0 67 87469.0 68 69914.0 69 69914.0 70 55933.0 71 41952.0 72 32472.0 73 22992.0 74 22992.0 75 17199.0 76 11406.0 77 11406.0 78 10817.0 79 10228.0 80 7887.5 81 5547.0 82 5547.0 83 5268.5 84 4990.0 85 4990.0 86 3164.0 87 1338.0 88 1118.5 89 899.0 90 899.0 91 542.0 92 185.0 93 120.5 94 56.0 95 56.0 96 45.0 97 34.0 98 34.0 99 31.5 100 29.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008653244366208127 2 0.0 3 0.0 4 7.063872952006634E-5 5 7.063872952006634E-5 6 2.472355533202322E-4 7 5.651098361605307E-4 8 0.002260439344642123 9 0.004132365676923881 10 6.004292009205639E-4 11 0.004838752972124545 12 2.8255491808026537E-4 13 2.472355533202322E-4 14 0.0 15 0.0 16 1.7659682380016586E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 1.059580942800995E-4 22 3.531936476003317E-5 23 2.11916188560199E-4 24 0.0 25 0.0 26 1.4127745904013268E-4 27 3.531936476003317E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2831308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.07816402501072 #Duplication Level Percentage of deduplicated Percentage of total 1 73.46426418592297 35.320269435075254 2 15.008422906597419 14.431548365202376 3 5.065938351984141 7.306830450818583 4 2.211749629279128 4.253474458349543 5 1.1529527001327189 2.771592451502993 6 0.7015965457354114 2.0238884283148826 7 0.4725275855099702 1.5902781133743438 8 0.31852375410961725 1.2251229836755488 9 0.24611473807507286 1.0649470271531312 >10 1.194123658331418 10.066035867043869 >50 0.07486975562443832 2.5164982884835316 >100 0.06883465246018669 7.049183322329414 >500 0.012624789325864092 4.0885736998135185 >1k 0.007309088557048264 5.718607831347061 >5k 1.4765835468784374E-4 0.5731492775159428 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 9749 0.3443284870455634 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 6398 0.22597329573469221 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 3773 0.13325996323960515 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3264 0.11528240657674828 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3114 0.1099845018627433 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3073 0.10853640790758194 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2841 0.10034231528325424 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7659682380016586E-4 2 0.0 0.0 0.0 0.0 1.7659682380016586E-4 3 0.0 0.0 0.0 0.0 1.7659682380016586E-4 4 0.0 0.0 0.0 0.0 1.7659682380016586E-4 5 0.0 0.0 0.0 0.0 2.1191618856019904E-4 6 7.063872952006634E-5 0.0 0.0 0.0 2.1191618856019904E-4 7 7.063872952006634E-5 0.0 0.0 0.0 2.1191618856019904E-4 8 7.063872952006634E-5 0.0 0.0 0.0 2.1191618856019904E-4 9 7.063872952006634E-5 0.0 0.0 0.0 2.1191618856019904E-4 10 7.063872952006634E-5 3.531936476003317E-5 0.0 0.0 2.1191618856019904E-4 11 7.063872952006634E-5 3.531936476003317E-5 0.0 3.531936476003317E-5 2.1191618856019904E-4 12 7.063872952006634E-5 3.531936476003317E-5 0.0 3.531936476003317E-5 2.8255491808026537E-4 13 7.063872952006634E-5 3.531936476003317E-5 0.0 3.531936476003317E-5 4.238323771203981E-4 14 7.063872952006634E-5 3.531936476003317E-5 0.0 3.531936476003317E-5 4.238323771203981E-4 15 7.063872952006634E-5 3.531936476003317E-5 0.0 7.063872952006634E-5 4.238323771203981E-4 16 1.7659682380016586E-4 3.531936476003317E-5 0.0 1.4127745904013268E-4 4.238323771203981E-4 17 1.7659682380016586E-4 3.531936476003317E-5 0.0 2.1191618856019904E-4 4.238323771203981E-4 18 1.7659682380016586E-4 3.531936476003317E-5 0.0 2.1191618856019904E-4 4.5915174188043126E-4 19 1.7659682380016586E-4 3.531936476003317E-5 0.0 2.472355533202322E-4 4.5915174188043126E-4 20 1.7659682380016586E-4 3.531936476003317E-5 0.0 3.1787428284029854E-4 4.944711066404644E-4 21 1.7659682380016586E-4 3.531936476003317E-5 0.0 4.238323771203981E-4 5.297904714004976E-4 22 1.7659682380016586E-4 3.531936476003317E-5 0.0 4.944711066404644E-4 5.297904714004976E-4 23 1.7659682380016586E-4 3.531936476003317E-5 0.0 0.0010949003075610283 5.651098361605307E-4 24 1.7659682380016586E-4 3.531936476003317E-5 0.0 0.0018719263322817582 5.651098361605307E-4 25 1.7659682380016586E-4 3.531936476003317E-5 0.0 0.002260439344642123 5.651098361605307E-4 26 1.7659682380016586E-4 3.531936476003317E-5 0.0 0.0029668266398427865 5.651098361605307E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCGTA 45 0.008855718 17.776964 15 TACCGTC 705 0.0 15.888884 7 ATACCGT 745 0.0 15.035257 6 ACCGTCG 715 0.0 14.995233 8 CATCGTT 670 0.0 14.805292 28 ACGAACG 320 0.0 14.499336 15 TCGTTTA 710 0.0 14.421875 30 CGTTTAT 700 0.0 14.39934 31 GTATCAA 6105 0.0 14.389072 1 ATCGTTT 705 0.0 14.297218 29 CGAACGA 325 0.0 13.783984 16 TATACCG 70 0.0068019317 13.7158375 5 CGTCGTA 775 0.0 13.625904 10 TAACGAA 335 0.0 13.372994 13 GCATCGT 755 0.0 13.350382 27 CTTTCGT 875 0.0 13.34796 27 AACCGCG 420 0.0 13.335314 7 TTTCGTT 915 0.0 13.289008 28 CGACTTT 930 0.0 13.246705 24 TACGCTA 745 0.0 13.101922 9 >>END_MODULE