##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062964_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1333378 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.174011420617408 32.0 32.0 32.0 32.0 32.0 2 31.23160049138354 32.0 32.0 32.0 32.0 32.0 3 31.341402813005764 32.0 32.0 32.0 32.0 32.0 4 31.45143087706562 32.0 32.0 32.0 32.0 32.0 5 31.35258568837944 32.0 32.0 32.0 32.0 32.0 6 34.881011986098464 36.0 36.0 36.0 36.0 36.0 7 34.91234743636088 36.0 36.0 36.0 36.0 36.0 8 34.84289526300869 36.0 36.0 36.0 32.0 36.0 9 34.97426986195963 36.0 36.0 36.0 36.0 36.0 10 34.80704946384296 36.0 36.0 36.0 32.0 36.0 11 34.989720844351716 36.0 36.0 36.0 36.0 36.0 12 34.880434505444065 36.0 36.0 36.0 32.0 36.0 13 34.93890329673956 36.0 36.0 36.0 36.0 36.0 14 34.88484210778939 36.0 36.0 36.0 32.0 36.0 15 34.847816598143964 36.0 36.0 36.0 32.0 36.0 16 34.865935241169424 36.0 36.0 36.0 32.0 36.0 17 34.82080625299052 36.0 36.0 36.0 32.0 36.0 18 34.83144239667971 36.0 36.0 36.0 32.0 36.0 19 34.82746228001362 36.0 36.0 36.0 32.0 36.0 20 34.808478915956314 36.0 36.0 36.0 32.0 36.0 21 34.80883440404747 36.0 36.0 36.0 32.0 36.0 22 34.7862984090033 36.0 36.0 36.0 32.0 36.0 23 34.71889591698678 36.0 36.0 36.0 32.0 36.0 24 34.698774091067946 36.0 36.0 36.0 32.0 36.0 25 34.66418899966851 36.0 36.0 36.0 32.0 36.0 26 34.60363602819306 36.0 36.0 36.0 32.0 36.0 27 34.58884652364146 36.0 36.0 36.0 32.0 36.0 28 34.56141544258267 36.0 36.0 36.0 32.0 36.0 29 34.518270887925254 36.0 36.0 36.0 32.0 36.0 30 34.49789932037277 36.0 36.0 36.0 32.0 36.0 31 34.50394936769618 36.0 36.0 36.0 32.0 36.0 32 34.47584630914864 36.0 36.0 36.0 32.0 36.0 33 34.43234401647545 36.0 36.0 36.0 32.0 36.0 34 34.42378830309185 36.0 36.0 36.0 32.0 36.0 35 34.38615231389748 36.0 36.0 36.0 32.0 36.0 36 34.35377964838178 36.0 36.0 36.0 32.0 36.0 37 34.34621390183429 36.0 36.0 36.0 32.0 36.0 38 33.89442228685339 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 4.0 21 20.0 22 92.0 23 320.0 24 827.0 25 2136.0 26 4547.0 27 8844.0 28 15494.0 29 25238.0 30 38246.0 31 55549.0 32 80850.0 33 130720.0 34 313321.0 35 657169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.25400932747104 18.468857677312705 11.825622193920793 26.451510801295463 2 16.118685024051693 20.40179153998341 36.24426081726262 27.235262618702272 3 17.91487485169247 24.21796369821611 28.74916190307625 29.117999547015177 4 11.797131339645636 15.620211868379114 36.15089528452236 36.43176150745289 5 14.218259352006221 36.84524331828133 33.17336357234301 15.763133757369447 6 35.03680126715755 35.891322640691534 15.987589415754572 13.084286676396339 7 30.57120722020686 30.46058517934645 20.643197794459 18.32500980598769 8 28.682149031195976 32.607689682715275 18.977383947890456 19.73277733819829 9 27.27079089553627 13.76754637282461 18.3245032715229 40.63715946011622 10 15.778010772768386 26.223711190209407 31.042282590924298 26.95599544609791 11 38.46894624459149 20.90050603119888 21.572514263299723 19.058033460909897 12 24.68240367488516 23.792031499015657 28.073047717258838 23.452517108840347 13 29.344963952430557 18.748485987083924 25.42731725535989 26.47923280512563 14 23.6213763999229 19.63630691094867 24.495772763441998 32.24654392568643 15 25.390024434181456 26.988670879525532 21.96586414355119 25.655440542741818 16 26.45626371516554 25.565218565178068 23.0040543641788 24.974463355477592 17 24.22988829874199 25.925506495532403 24.65939891013651 25.185206295589097 18 25.766736814316722 24.124591826173823 25.896407470349743 24.212263889159715 19 25.75503720625359 24.9692135313467 25.101959084370673 24.173790178029037 20 25.828984729011577 23.799852704934384 24.75427073193048 25.616891834123557 21 27.39165292336676 23.994639175567002 23.954815479793037 24.658892421273205 22 25.792030311007313 24.00828872854414 24.828311872786166 25.371369087662377 23 24.204893597075092 23.525114840161248 25.582225555451394 26.68776600731227 24 24.846742634121757 25.078634865731996 24.832493111480765 25.24212938866548 25 25.071772703273492 24.19910062877988 24.94757667754632 25.78154999040031 26 24.879666531171203 25.158507190009132 25.404723941747953 24.557102337071708 27 25.77195029759048 24.435418066621867 24.46046726504752 25.332164370740134 28 24.65069920157675 24.145291132747055 25.842034291851224 25.361975373824976 29 24.597150995441652 24.577576651182184 25.679814726206672 25.14545762716949 30 24.58432642506476 24.7257716866485 25.9695300207443 24.720371867542436 31 25.271153416360555 24.591151196434918 24.423081826758803 25.714613560445727 32 24.858667234647637 24.477155015306987 24.48532974145366 26.17884800859171 33 24.419181957404426 24.034294851122485 25.251354079638332 26.295169111834753 34 25.504095612796974 24.1990643313449 25.438022826235322 24.858817229622808 35 26.49023757704117 24.001595946535794 25.157832212620878 24.35033426380216 36 24.709497231842732 25.02726158673684 24.725171706747822 25.538069474672596 37 26.122599892903587 24.683773093601364 24.617175324626626 24.576451688868424 38 24.8460676567335 24.161865577503153 25.377574851242485 25.614491914520865 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 46.0 1 63.5 2 81.0 3 81.0 4 321.5 5 562.0 6 562.0 7 730.0 8 898.0 9 959.0 10 1020.0 11 1020.0 12 1253.5 13 1487.0 14 2104.0 15 2721.0 16 2721.0 17 4074.0 18 5427.0 19 5427.0 20 6511.5 21 7596.0 22 8457.5 23 9319.0 24 9319.0 25 10799.0 26 12279.0 27 12279.0 28 15910.0 29 19541.0 30 23392.5 31 27244.0 32 27244.0 33 35976.5 34 44709.0 35 44709.0 36 49534.0 37 54359.0 38 62611.0 39 70863.0 40 70863.0 41 75467.0 42 80071.0 43 91899.5 44 103728.0 45 103728.0 46 106618.0 47 109508.0 48 109508.0 49 116804.5 50 124101.0 51 125234.0 52 126367.0 53 126367.0 54 119915.5 55 113464.0 56 113464.0 57 110977.0 58 108490.0 59 97270.0 60 86050.0 61 86050.0 62 83124.0 63 80198.0 64 66674.0 65 53150.0 66 53150.0 67 44442.0 68 35734.0 69 35734.0 70 28939.0 71 22144.0 72 17059.0 73 11974.0 74 11974.0 75 8931.0 76 5888.0 77 5888.0 78 5991.0 79 6094.0 80 4763.5 81 3433.0 82 3433.0 83 3303.5 84 3174.0 85 3174.0 86 2015.5 87 857.0 88 727.0 89 597.0 90 597.0 91 358.5 92 120.0 93 81.5 94 43.0 95 43.0 96 30.0 97 17.0 98 17.0 99 20.5 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008399718609426584 2 0.0 3 0.0 4 2.2499246275249778E-4 5 7.499748758416593E-5 6 0.0 7 6.749773882574934E-4 8 0.0024749170902774757 9 0.00404986432954496 10 0.0011999598013466548 11 0.004574846742634122 12 2.2499246275249778E-4 13 7.499748758416593E-5 14 7.499748758416593E-5 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 7.499748758416593E-5 22 7.499748758416593E-5 23 2.2499246275249778E-4 24 0.0 25 1.4999497516833185E-4 26 0.0 27 1.4999497516833185E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1333378.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.63029984947679 #Duplication Level Percentage of deduplicated Percentage of total 1 77.36942731538768 37.62498449529603 2 13.75045589609748 13.373775865884529 3 3.974940163816951 5.799075961504401 4 1.673628916048281 3.255563040967309 5 0.8854071295498619 2.152880709943716 6 0.5014220799593663 1.4630583659743388 7 0.31686410499108214 1.0786437506076694 8 0.23321126606910245 0.9072907037773251 9 0.17899389667829166 0.7834074180022431 >10 0.8900941744363394 7.8263142024742045 >50 0.09236156283966426 3.1643917548384235 >100 0.10949745044200418 11.604650944762458 >500 0.01657174296845753 5.568616495716185 >1k 0.00712430071541165 5.397346290251207 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3198 0.23984196529416263 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2486 0.1864437541342365 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2363 0.17721906316138408 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2256 0.16919433198987835 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2145 0.16086961086803592 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2138 0.16034462845494676 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2031 0.152319897283441 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2024 0.15179491487035185 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1965 0.14737006310288606 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1954 0.14654509073946023 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1932 0.14489514601260858 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1765 0.13237056558605287 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1755 0.1316205907102112 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1706 0.12794571381858708 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1691 0.1268207515048246 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1636 0.12269588968769546 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1567 0.11752106304438802 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1551 0.11632110324304136 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1533 0.11497114846652637 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1504 0.11279622132658557 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1472 0.11039630172389224 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1445 0.10837136955911977 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 1432 0.1073964022205256 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1426 0.10694641729502062 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 1401 0.10507148010541648 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1373 0.1029715504530598 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1365 0.10237157055238649 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1363 0.10222157557721816 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1344 0.100796623313119 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 7.499748758416593E-5 14 0.0 0.0 0.0 0.0 7.499748758416593E-5 15 0.0 0.0 0.0 0.0 7.499748758416593E-5 16 0.0 0.0 0.0 0.0 1.4999497516833185E-4 17 0.0 0.0 0.0 0.0 1.4999497516833185E-4 18 0.0 0.0 0.0 0.0 1.4999497516833185E-4 19 0.0 0.0 0.0 0.0 1.4999497516833185E-4 20 0.0 0.0 0.0 7.499748758416593E-5 1.4999497516833185E-4 21 0.0 0.0 0.0 3.7498743792082966E-4 1.4999497516833185E-4 22 0.0 0.0 0.0 3.7498743792082966E-4 1.4999497516833185E-4 23 0.0 0.0 0.0 8.999698510099911E-4 1.4999497516833185E-4 24 0.0 0.0 0.0 0.0016499447268516505 1.4999497516833185E-4 25 0.0 0.0 0.0 0.002249924627524978 1.4999497516833185E-4 26 0.0 0.0 0.0 0.0026999095530299733 1.4999497516833185E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGA 40 0.004484581 19.999437 12 GGATCGA 50 7.1926793E-4 19.20162 6 GATATAC 100 3.261448E-9 19.20162 1 TCGACAT 50 7.1981264E-4 19.19946 13 TCTAGCG 495 0.0 19.070171 28 ATCGTTT 430 0.0 18.97621 29 TAGCGGC 515 0.0 18.640253 30 CATCGTT 440 0.0 18.544931 28 CTAGCGG 510 0.0 18.509283 29 ACCGTCG 355 0.0 18.02969 8 TACCGTC 350 0.0 17.830076 7 TAGGACG 75 3.2330172E-5 17.067467 4 GGACCGT 85 4.9811333E-6 16.942606 6 AACCGCG 275 0.0 16.874151 7 CGTTTAT 490 0.0 16.652594 31 CGCGGTC 280 0.0 16.571585 10 TCGTTTA 495 0.0 16.484385 30 CGTCGTA 415 0.0 16.192923 10 GCATCGT 515 0.0 16.154886 27 AGCGGCG 595 0.0 16.133999 31 >>END_MODULE