##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062961_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1303697 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28212920640302 32.0 32.0 32.0 32.0 32.0 2 30.986434731383135 32.0 32.0 32.0 32.0 32.0 3 31.036626608790232 32.0 32.0 32.0 32.0 32.0 4 31.082225394397625 32.0 32.0 32.0 32.0 32.0 5 31.04153112264583 32.0 32.0 32.0 32.0 32.0 6 34.65947455582087 36.0 36.0 36.0 32.0 36.0 7 34.599470582504985 36.0 36.0 36.0 32.0 36.0 8 34.587933392498414 36.0 36.0 36.0 32.0 36.0 9 34.689917979407795 36.0 36.0 36.0 32.0 36.0 10 34.46905761077919 36.0 36.0 36.0 32.0 36.0 11 34.67983051276485 36.0 36.0 36.0 32.0 36.0 12 34.53173014895332 36.0 36.0 36.0 32.0 36.0 13 34.60176712840484 36.0 36.0 36.0 32.0 36.0 14 34.51093927500025 36.0 36.0 36.0 32.0 36.0 15 34.47925860073315 36.0 36.0 36.0 32.0 36.0 16 34.49685471394043 36.0 36.0 36.0 32.0 36.0 17 34.41796291622977 36.0 36.0 36.0 32.0 36.0 18 34.4446010077495 36.0 36.0 36.0 32.0 36.0 19 34.42945408327242 36.0 36.0 36.0 32.0 36.0 20 34.396009195388196 36.0 36.0 36.0 32.0 36.0 21 34.368755163201264 36.0 36.0 36.0 32.0 36.0 22 34.34976762238465 36.0 36.0 36.0 32.0 36.0 23 34.31227501482323 36.0 36.0 36.0 32.0 36.0 24 34.30013569103864 36.0 36.0 36.0 32.0 36.0 25 34.27116730344551 36.0 36.0 36.0 32.0 36.0 26 34.238704238791684 36.0 36.0 36.0 32.0 36.0 27 34.23595513374657 36.0 36.0 36.0 32.0 36.0 28 34.21960240761465 36.0 36.0 36.0 32.0 36.0 29 34.172336056614384 36.0 36.0 36.0 32.0 36.0 30 34.15170166073865 36.0 36.0 36.0 32.0 36.0 31 34.15690915910675 36.0 36.0 36.0 32.0 36.0 32 34.119948116778666 36.0 36.0 36.0 32.0 36.0 33 34.07579828748551 36.0 36.0 36.0 32.0 36.0 34 34.081692295065494 36.0 36.0 36.0 32.0 36.0 35 34.03782320585228 36.0 36.0 36.0 32.0 36.0 36 34.011591650513886 36.0 36.0 36.0 32.0 36.0 37 33.99041495071324 36.0 36.0 36.0 32.0 36.0 38 33.351770388364784 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 0.0 9 4.0 10 10.0 11 9.0 12 7.0 13 8.0 14 140.0 15 288.0 16 444.0 17 483.0 18 655.0 19 909.0 20 1195.0 21 1597.0 22 2279.0 23 3385.0 24 4843.0 25 7243.0 26 10602.0 27 15506.0 28 22039.0 29 30613.0 30 41549.0 31 56958.0 32 79785.0 33 122570.0 34 283511.0 35 617063.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.2067355913303 17.51634669587082 11.558346606783822 25.718571106015066 2 16.277847109334587 19.506830053771612 38.616397962112735 25.59892487478107 3 19.05526851777269 23.670299069077018 28.534342888047593 28.740089525102704 4 12.21152415273284 15.319231518599146 36.412122160498654 36.05712216816936 5 14.375766092349892 36.871228984715735 33.636957752356 15.116047170578373 6 34.044467558288304 35.931032789953456 16.84515974632045 13.179339905437788 7 30.342579865244655 30.3989580392975 20.669772707747818 18.58868938771002 8 27.890176514084615 33.771473630274635 19.32810817278928 19.01024168285147 9 27.599323461392427 13.95372383878131 18.813986400193297 39.63296629963297 10 16.06573321653701 26.6415278431902 31.62068706306848 25.672051877204318 11 37.81313426516138 20.782112706090633 22.481387217970138 18.92336581077785 12 25.006462539897072 23.76043882371802 28.998969828951722 22.234128807433187 13 29.950656077771914 19.35874381666646 25.213808319728976 25.47679178583265 14 23.130143543606202 20.435018748427403 25.167922698791635 31.266915009174763 15 24.78335756455158 28.403923539317873 22.251086568744412 24.561632327386135 16 25.173966309106543 25.800406119563625 24.915136046985285 24.110491524344543 17 23.508454018257517 26.30377693881606 25.672995704519426 24.514773338406997 18 24.602380729560597 24.662366891320723 27.499129356859363 23.236123022259314 19 25.577743582033225 24.793380822119566 25.47809690964908 24.15077868619813 20 25.642070057953337 24.457382626271922 25.57771155269688 24.322835763077855 21 26.888082411087353 24.21803743601427 24.408891916376895 24.484988236521477 22 25.620333641962763 24.975663789790374 25.36281856655311 24.041184001693754 23 23.88024894693116 24.66325194408283 26.13275379706974 25.32374531191627 24 24.67583777389426 25.28189187074324 25.880657975288337 24.161612380074168 25 24.613171613022015 24.933313386805374 25.860443349942653 24.593071650229962 26 23.661982204259747 26.19110090236893 26.596023807441437 23.55089308592989 27 24.754272283110243 25.207103224435535 25.525458028179386 24.51316646427484 28 23.63609166746572 25.46767667082175 26.16066736983412 24.735564291878415 29 23.92398013430974 25.205476719798337 25.871962342948585 24.998580802943337 30 23.62557031391428 25.59478333440723 26.48511737650997 24.294528975168525 31 24.937136492438736 25.210989722449366 24.973113289322484 24.87876049578941 32 24.19498978611049 25.596781876885622 25.0179308800054 25.19029745699849 33 23.66451389203192 25.171430565922236 26.182408719312605 24.98164682273324 34 24.680502419965464 25.431999699278347 26.121434779840296 23.766063100915897 35 25.12299813958841 25.233318629049272 26.09248355357793 23.551199677784385 36 23.609985945660647 25.95212011857198 25.80774093372366 24.63015300204371 37 24.857737266929227 25.724354735519427 25.07337519772564 24.34453279982571 38 23.916917315438507 25.861736997906593 25.566098018052845 24.65524766860205 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 70.0 1 102.0 2 134.0 3 134.0 4 408.5 5 683.0 6 683.0 7 905.0 8 1127.0 9 1220.5 10 1314.0 11 1314.0 12 1650.0 13 1986.0 14 2645.5 15 3305.0 16 3305.0 17 4852.0 18 6399.0 19 6399.0 20 7658.0 21 8917.0 22 9826.5 23 10736.0 24 10736.0 25 13314.5 26 15893.0 27 15893.0 28 20799.5 29 25706.0 30 32229.5 31 38753.0 32 38753.0 33 47645.0 34 56537.0 35 56537.0 36 61458.0 37 66379.0 38 73249.5 39 80120.0 40 80120.0 41 81332.5 42 82545.0 43 90645.0 44 98745.0 45 98745.0 46 99012.5 47 99280.0 48 99280.0 49 105442.0 50 111604.0 51 112465.5 52 113327.0 53 113327.0 54 108796.0 55 104265.0 56 104265.0 57 100704.0 58 97143.0 59 86902.5 60 76662.0 61 76662.0 62 73503.5 63 70345.0 64 58841.5 65 47338.0 66 47338.0 67 40047.0 68 32756.0 69 32756.0 70 26282.5 71 19809.0 72 15517.0 73 11225.0 74 11225.0 75 8509.0 76 5793.0 77 5793.0 78 5619.0 79 5445.0 80 4285.5 81 3126.0 82 3126.0 83 3156.5 84 3187.0 85 3187.0 86 2124.5 87 1062.0 88 902.0 89 742.0 90 742.0 91 522.5 92 303.0 93 261.0 94 219.0 95 219.0 96 204.0 97 189.0 98 189.0 99 358.5 100 528.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12265119885985779 2 0.059753148162494815 3 0.011659150860974597 4 0.002684672895619151 5 2.3011481962449863E-4 6 3.835246993741644E-4 7 7.670493987483289E-5 8 3.835246993741644E-4 9 1.5340987974966577E-4 10 2.3011481962449863E-4 11 0.0017642136171211562 12 0.0023011481962449862 13 0.014804053395842747 14 0.009281297724854778 15 0.021630793044702872 16 0.010738691582476603 17 0.017948955930710893 18 0.004832411212114471 19 0.006980149528609792 20 0.004755706272239639 21 0.006596624829235628 22 0.006443214949485961 23 0.009664822424228942 24 0.014037003997094415 25 0.01626144725346457 26 0.01833248063008506 27 0.009204592784979945 28 0.005522755670987967 29 0.010968806402101102 30 0.0022244432563701534 31 0.006059690250111797 32 0.006136395189986631 33 0.008284133506481951 34 0.012733020019222257 35 0.0170284966522129 36 0.014190413876844082 37 0.009434707604604445 38 0.006136395189986631 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1303697.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.02840710307727 #Duplication Level Percentage of deduplicated Percentage of total 1 78.63071349588125 42.48292199560905 2 13.368752196080639 14.445847722200062 3 3.9059835497042483 6.331022080840319 4 1.6063867250795991 3.471620637903186 5 0.7236256622211943 1.9548170934360283 6 0.40225206178949685 1.3039822891449078 7 0.23934992056486815 0.9052186463857532 8 0.18658471870878984 0.8064700113289325 9 0.13241401161061664 0.6438706312904996 >10 0.6155532064108521 6.299313082416023 >50 0.08094424152738691 3.041630343925557 >100 0.09180738995050727 10.651309505117142 >500 0.011085090879113422 4.124876091763339 >1k 0.0045477295914311475 3.537099868639265 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3773 0.28940773814774445 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2682 0.2057226487443018 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1839 0.14106038442981766 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1828 0.1402166300911945 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1639 0.12571939645485108 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1617 0.12403188777760477 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1597 0.1224977889801081 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1529 0.11728185306861948 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1515 0.1162079839103718 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1497 0.11482729499262483 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1455 0.11160568751788183 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1403 0.10761703064439054 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1374 0.10539258738802038 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1353 0.10378178365064887 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1306 0.10017665147653175 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1305 0.10009994653665691 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.670493987483289E-5 2 0.0 0.0 0.0 0.0 7.670493987483289E-5 3 0.0 0.0 0.0 0.0 7.670493987483289E-5 4 0.0 0.0 0.0 0.0 7.670493987483289E-5 5 0.0 0.0 0.0 0.0 7.670493987483289E-5 6 0.0 0.0 0.0 0.0 7.670493987483289E-5 7 0.0 0.0 0.0 7.670493987483289E-5 7.670493987483289E-5 8 0.0 0.0 0.0 1.5340987974966577E-4 7.670493987483289E-5 9 0.0 0.0 0.0 1.5340987974966577E-4 7.670493987483289E-5 10 0.0 0.0 0.0 1.5340987974966577E-4 7.670493987483289E-5 11 0.0 0.0 0.0 1.5340987974966577E-4 7.670493987483289E-5 12 0.0 0.0 0.0 3.0681975949933154E-4 3.0681975949933154E-4 13 0.0 0.0 0.0 3.0681975949933154E-4 4.6022963924899726E-4 14 0.0 0.0 0.0 3.0681975949933154E-4 4.6022963924899726E-4 15 0.0 0.0 0.0 3.8352469937416437E-4 6.903444588734959E-4 16 0.0 0.0 0.0 4.6022963924899726E-4 6.903444588734959E-4 17 0.0 0.0 0.0 5.369345791238301E-4 6.903444588734959E-4 18 0.0 0.0 0.0 5.369345791238301E-4 9.204592784979945E-4 19 0.0 0.0 0.0 6.136395189986631E-4 9.204592784979945E-4 20 0.0 0.0 0.0 6.136395189986631E-4 0.0010738691582476603 21 0.0 0.0 0.0 7.670493987483287E-4 0.0010738691582476603 22 0.0 0.0 0.0 0.0011505740981224931 0.0010738691582476603 23 0.0 0.0 0.0 0.0013806889177469918 0.0010738691582476603 24 0.0 0.0 0.0 0.0020710333766204877 0.0010738691582476603 25 0.0 0.0 0.0 0.002377853136119819 0.0010738691582476603 26 0.0 0.0 0.0 0.002991492655118482 0.0012272790379973262 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 405 0.0 18.171751 28 TAGCGGC 415 0.0 17.733198 30 CTAGCGG 410 0.0 17.559921 29 GTCCTAC 875 0.0 16.293936 1 ATCGTTT 315 0.0 16.252993 29 GATATAC 345 0.0 16.251482 1 TCCTACA 905 0.0 16.098549 2 GCTATAC 80 5.622824E-5 15.999655 3 CGCTTCG 310 0.0 15.998428 32 GGACCGT 90 8.596839E-6 15.9972 6 CGCAAGA 485 0.0 15.845043 2 ACGTTTT 415 0.0 15.806282 29 GTAGGAC 755 0.0 15.68178 3 CGGTCCA 500 0.0 15.679662 10 AAGACGG 550 0.0 15.416075 5 CCTACAG 915 0.0 15.387646 3 CGCCGGT 480 0.0 15.331826 7 AGCGGCG 470 0.0 15.317643 31 CACGTTT 405 0.0 15.011446 28 TAGGACG 640 0.0 14.999677 4 >>END_MODULE