##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062961_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1303697 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.172209493463587 32.0 32.0 32.0 32.0 32.0 2 31.26140583279704 32.0 32.0 32.0 32.0 32.0 3 31.352039622703742 32.0 32.0 32.0 32.0 32.0 4 31.457903945471994 32.0 32.0 32.0 32.0 32.0 5 31.364147497462984 32.0 32.0 32.0 32.0 32.0 6 34.88896576428419 36.0 36.0 36.0 36.0 36.0 7 34.92768104858721 36.0 36.0 36.0 36.0 36.0 8 34.84785805290647 36.0 36.0 36.0 32.0 36.0 9 34.978088466875356 36.0 36.0 36.0 36.0 36.0 10 34.816949030334506 36.0 36.0 36.0 32.0 36.0 11 34.9904379621952 36.0 36.0 36.0 36.0 36.0 12 34.87910150901628 36.0 36.0 36.0 32.0 36.0 13 34.951718842645185 36.0 36.0 36.0 36.0 36.0 14 34.88903403168067 36.0 36.0 36.0 32.0 36.0 15 34.86072990886686 36.0 36.0 36.0 32.0 36.0 16 34.875936663197045 36.0 36.0 36.0 32.0 36.0 17 34.84307473285587 36.0 36.0 36.0 32.0 36.0 18 34.83661387577021 36.0 36.0 36.0 32.0 36.0 19 34.821817492868355 36.0 36.0 36.0 32.0 36.0 20 34.810449820778906 36.0 36.0 36.0 32.0 36.0 21 34.79695435365733 36.0 36.0 36.0 32.0 36.0 22 34.777370815457886 36.0 36.0 36.0 32.0 36.0 23 34.725330348999805 36.0 36.0 36.0 32.0 36.0 24 34.70960967157246 36.0 36.0 36.0 32.0 36.0 25 34.68350467938486 36.0 36.0 36.0 32.0 36.0 26 34.61810681469697 36.0 36.0 36.0 32.0 36.0 27 34.60427614698814 36.0 36.0 36.0 32.0 36.0 28 34.562031668401474 36.0 36.0 36.0 32.0 36.0 29 34.530944690369004 36.0 36.0 36.0 32.0 36.0 30 34.49765014416693 36.0 36.0 36.0 32.0 36.0 31 34.498489296209165 36.0 36.0 36.0 32.0 36.0 32 34.46826064645389 36.0 36.0 36.0 32.0 36.0 33 34.43874305149126 36.0 36.0 36.0 32.0 36.0 34 34.423665161460065 36.0 36.0 36.0 32.0 36.0 35 34.387199633043565 36.0 36.0 36.0 32.0 36.0 36 34.3564800716731 36.0 36.0 36.0 32.0 36.0 37 34.341049338918474 36.0 36.0 36.0 32.0 36.0 38 33.89454067931429 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 18.0 22 92.0 23 271.0 24 816.0 25 2141.0 26 4450.0 27 8751.0 28 15406.0 29 24636.0 30 37132.0 31 54400.0 32 78489.0 33 125600.0 34 303508.0 35 647982.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.5039199501683 18.783235193941643 12.234540360911577 26.478304494978477 2 15.363232407530278 20.570117136113684 37.62852871487777 26.43812174147827 3 18.110266419267667 24.370233267392656 28.877415534437834 28.642084778901843 4 11.773878932968012 16.222939331482692 36.39604783648886 35.607133899060436 5 13.837187628720477 37.38215244799981 33.3090434357063 15.471616487573417 6 34.20858850529571 36.34313520943533 16.359795535155435 13.088480750113524 7 29.94181921384986 30.713165272552246 20.73805606372656 18.606959449871326 8 27.770554551974623 33.94046783491157 19.1240847917218 19.164892821391998 9 27.404727185420025 13.751916732315628 18.633744767579667 40.20961131468468 10 15.854955982532617 26.901549221553942 31.525665286222843 25.717829509690592 11 37.9231731629991 20.84029784456208 22.32507155004514 18.91145744239368 12 24.803232049263134 23.882616536255085 28.94147625246128 22.372675162020506 13 29.79490617444558 19.365480909659922 25.285342595206245 25.55427032068826 14 23.04876056322903 20.390704281746448 25.05421121625654 31.506323938767984 15 24.71218388935466 28.455308250306626 22.132826876183653 24.699680984155062 16 25.14602702928671 25.85209600083455 24.758820492798556 24.24305647708018 17 23.541589801924832 26.436127413041525 25.476625320147246 24.545657464886396 18 24.597279889422158 24.65266085601179 27.388419241587574 23.361640012978476 19 25.505006147900932 24.76395972377017 25.614617506982068 24.116416621346833 20 25.803158249194407 24.40175899768121 25.4846793388341 24.31040341429028 21 26.880060136765117 24.106328550772997 24.52283701325847 24.49077429920342 22 25.53722222264836 24.961474943947863 25.406517005101648 24.09478582830213 23 23.793295210919734 24.676247128354408 26.149674578793352 25.380783081932506 24 24.8080650641982 25.161444722201555 25.85217270577442 24.178317507825824 25 24.66646774518926 24.794028060201104 25.889911536192844 24.649592658416793 26 23.860759056744012 26.081827295759673 26.49097144505203 23.56644220244428 27 24.87901676238194 25.027134455734597 25.56322692535743 24.53062185652604 28 23.685871793829392 25.28486297046016 26.26799018483589 24.761275050874552 29 23.94306345722971 24.977199456622206 26.011412160954578 25.068324925193508 30 23.71103101410834 25.43075576610209 26.474633292858694 24.383579926930874 31 24.932633886554928 24.950199317786264 25.09823985174469 25.018926943914117 32 24.274735617248485 25.482685010397354 25.16566349389467 25.076915878459488 33 23.780679099514686 24.970296012033472 26.203864855100534 25.04516003335131 34 24.657569972163778 25.191359648752737 26.32076318346978 23.830307195613702 35 25.24213831894988 25.111433101403165 25.999292780454354 23.647135799192604 36 23.675286512126668 25.78589963772257 25.877178516173622 24.661635333977145 37 25.08734775028247 25.464122414947642 25.04377934443356 24.404750490336326 38 24.081994575422492 25.37324652372946 25.780473361888046 24.764285538960003 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 49.5 2 66.0 3 66.0 4 303.5 5 541.0 6 541.0 7 801.0 8 1061.0 9 1216.5 10 1372.0 11 1372.0 12 1740.0 13 2108.0 14 2723.0 15 3338.0 16 3338.0 17 5094.5 18 6851.0 19 6851.0 20 8008.5 21 9166.0 22 10046.0 23 10926.0 24 10926.0 25 13397.5 26 15869.0 27 15869.0 28 20752.0 29 25635.0 30 31853.5 31 38072.0 32 38072.0 33 47412.5 34 56753.0 35 56753.0 36 61639.0 37 66525.0 38 73241.5 39 79958.0 40 79958.0 41 80931.5 42 81905.0 43 90130.0 44 98355.0 45 98355.0 46 98684.5 47 99014.0 48 99014.0 49 105513.5 50 112013.0 51 112483.5 52 112954.0 53 112954.0 54 108312.0 55 103670.0 56 103670.0 57 101075.0 58 98480.0 59 87764.0 60 77048.0 61 77048.0 62 74113.5 63 71179.0 64 59369.5 65 47560.0 66 47560.0 67 40392.5 68 33225.0 69 33225.0 70 26863.5 71 20502.0 72 15884.0 73 11266.0 74 11266.0 75 8478.5 76 5691.0 77 5691.0 78 5480.5 79 5270.0 80 4206.0 81 3142.0 82 3142.0 83 2871.0 84 2600.0 85 2600.0 86 1716.5 87 833.0 88 688.0 89 543.0 90 543.0 91 324.0 92 105.0 93 71.0 94 37.0 95 37.0 96 26.0 97 15.0 98 15.0 99 15.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008360838446356784 2 0.0 3 0.0 4 4.6022963924899726E-4 5 0.0 6 7.670493987483289E-5 7 1.5340987974966577E-4 8 0.0024545580759946523 9 0.0035284272342423124 10 7.670493987483289E-4 11 0.004909116151989305 12 3.0681975949933154E-4 13 7.670493987483289E-5 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.5340987974966577E-4 22 0.0 23 1.5340987974966577E-4 24 0.0 25 0.0 26 0.0 27 3.0681975949933154E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 7.670493987483289E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1303697.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.27560809340604 #Duplication Level Percentage of deduplicated Percentage of total 1 77.19878170302992 40.35613257595998 2 14.192145159720514 14.838060367485584 3 4.218449888243569 6.6156609935848 4 1.7146123913987275 3.5852962161943043 5 0.7922540930312975 2.070778223885048 6 0.4325638862851101 1.3567524116880647 7 0.26827725642150413 0.9817049701945326 8 0.196355531972851 0.8211683869108015 9 0.12093744633840077 0.5689870693743206 >10 0.6691581369084654 6.552455269719879 >50 0.0811608019640858 2.9750365595742334 >100 0.0970202665658005 10.726838390298397 >500 0.013417684426631101 4.759927829556877 >1k 0.004865753693173916 3.7912007355731534 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4217 0.32346473145217025 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3146 0.24131374084622426 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1860 0.14267118816718916 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1855 0.142287663467815 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1811 0.13891264611332235 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1748 0.13408023490120788 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1660 0.12733020019222258 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1622 0.12441541247697893 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1606 0.12318813343898159 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1532 0.11751196788824397 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1502 0.11521081969199899 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1475 0.1131397863153785 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1445 0.11083863811913351 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1438 0.11030170354000969 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1427 0.10945794920138652 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1350 0.10355166883102439 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1325 0.10163404533415357 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1322 0.10140393051452908 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.670493987483289E-5 2 0.0 0.0 0.0 0.0 7.670493987483289E-5 3 0.0 0.0 0.0 0.0 7.670493987483289E-5 4 0.0 0.0 0.0 0.0 7.670493987483289E-5 5 0.0 0.0 0.0 0.0 7.670493987483289E-5 6 0.0 0.0 0.0 0.0 7.670493987483289E-5 7 0.0 0.0 0.0 0.0 7.670493987483289E-5 8 0.0 0.0 0.0 7.670493987483289E-5 7.670493987483289E-5 9 0.0 0.0 0.0 7.670493987483289E-5 7.670493987483289E-5 10 0.0 0.0 0.0 1.5340987974966577E-4 7.670493987483289E-5 11 0.0 0.0 0.0 1.5340987974966577E-4 7.670493987483289E-5 12 0.0 0.0 0.0 1.5340987974966577E-4 4.6022963924899726E-4 13 0.0 0.0 0.0 1.5340987974966577E-4 4.6022963924899726E-4 14 0.0 0.0 0.0 1.5340987974966577E-4 4.6022963924899726E-4 15 0.0 0.0 0.0 1.5340987974966577E-4 6.136395189986631E-4 16 0.0 0.0 0.0 2.3011481962449863E-4 6.136395189986631E-4 17 0.0 0.0 0.0 3.0681975949933154E-4 6.136395189986631E-4 18 0.0 0.0 0.0 3.0681975949933154E-4 6.136395189986631E-4 19 0.0 0.0 0.0 3.8352469937416437E-4 6.136395189986631E-4 20 0.0 0.0 0.0 3.8352469937416437E-4 7.670493987483287E-4 21 0.0 0.0 0.0 5.369345791238301E-4 8.437543386231617E-4 22 0.0 0.0 0.0 9.204592784979945E-4 9.204592784979945E-4 23 0.0 0.0 0.0 0.0010738691582476603 9.204592784979945E-4 24 0.0 0.0 0.0 0.0017642136171211562 9.204592784979945E-4 25 0.0 0.0 0.0 0.0020710333766204877 9.204592784979945E-4 26 0.0 0.0 0.0 0.002607967955744318 9.971642183728275E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTAATA 65 9.437072E-6 19.691906 2 ATACCGT 395 0.0 18.63396 6 TCTAGCG 405 0.0 18.567524 28 TAGCGGC 410 0.0 18.34109 30 CTAGCGG 410 0.0 18.34109 29 TGCGTAC 105 5.980837E-9 18.285341 16 TATTCGG 45 0.008848023 17.778778 5 CCGTGCG 100 6.817754E-8 17.59964 13 TCACGTT 315 0.0 17.26949 27 ACCGTCG 420 0.0 17.143822 8 CGTCGTA 405 0.0 16.98796 10 TACCGTC 430 0.0 16.745129 7 CATCGTT 300 0.0 16.532995 28 CCGTCGT 420 0.0 16.381874 9 ATCGTTT 305 0.0 16.261963 29 TGTAGGA 955 0.0 16.250978 2 GTATTAG 350 0.0 16.001516 1 GACTGCG 70 3.6952866E-4 16.000902 7 GTTATTC 220 0.0 16.000288 3 TCTATAC 80 5.6209246E-5 16.000288 3 >>END_MODULE