##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062960_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 201478 Sequences flagged as poor quality 0 Sequence length 38 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.770441437774846 32.0 32.0 32.0 32.0 32.0 2 30.59641747486078 32.0 32.0 32.0 32.0 32.0 3 30.757645996088904 32.0 32.0 32.0 32.0 32.0 4 30.693758127438233 32.0 32.0 32.0 32.0 32.0 5 30.816367047518835 32.0 32.0 32.0 32.0 32.0 6 34.344161645440195 36.0 36.0 36.0 32.0 36.0 7 34.07224610131131 36.0 36.0 36.0 32.0 36.0 8 34.02708980633121 36.0 36.0 36.0 32.0 36.0 9 34.01244800921192 36.0 36.0 36.0 32.0 36.0 10 33.97185796960462 36.0 36.0 36.0 32.0 36.0 11 34.29175393839526 36.0 36.0 36.0 32.0 36.0 12 34.134347174381325 36.0 36.0 36.0 32.0 36.0 13 34.17134873286413 36.0 36.0 36.0 32.0 36.0 14 34.092253248493634 36.0 36.0 36.0 32.0 36.0 15 34.12594923515223 36.0 36.0 36.0 32.0 36.0 16 34.08202384379436 36.0 36.0 36.0 32.0 36.0 17 34.030355671586975 36.0 36.0 36.0 32.0 36.0 18 34.088188288547634 36.0 36.0 36.0 32.0 36.0 19 34.01047260743108 36.0 36.0 36.0 32.0 36.0 20 33.85786041155858 36.0 36.0 36.0 32.0 36.0 21 33.7436692839913 36.0 36.0 36.0 32.0 36.0 22 33.772471436087315 36.0 36.0 36.0 32.0 36.0 23 33.75423619452248 36.0 36.0 36.0 32.0 36.0 24 33.744736398018645 36.0 36.0 36.0 27.0 36.0 25 33.693748200796115 36.0 36.0 36.0 27.0 36.0 26 33.69263641687926 36.0 36.0 36.0 27.0 36.0 27 33.63916159580699 36.0 36.0 36.0 27.0 36.0 28 33.64409513693803 36.0 36.0 36.0 27.0 36.0 29 33.575333287009 36.0 36.0 36.0 27.0 36.0 30 33.46895442678605 36.0 36.0 36.0 21.0 36.0 31 33.48576023188636 36.0 36.0 36.0 21.0 36.0 32 33.400063530509534 36.0 36.0 36.0 21.0 36.0 33 33.29078609078907 36.0 36.0 36.0 21.0 36.0 34 33.18293312421207 36.0 36.0 36.0 21.0 36.0 35 33.03628684025055 36.0 36.0 36.0 14.0 36.0 36 32.954913191514706 36.0 36.0 36.0 14.0 36.0 37 32.86948947279604 36.0 36.0 36.0 14.0 36.0 38 32.085944867429696 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 0.0 12 3.0 13 1.0 14 105.0 15 174.0 16 182.0 17 276.0 18 352.0 19 465.0 20 530.0 21 597.0 22 793.0 23 1024.0 24 1431.0 25 1895.0 26 2459.0 27 3383.0 28 4732.0 29 6394.0 30 8721.0 31 10986.0 32 14523.0 33 19953.0 34 40615.0 35 81882.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.38021868787277 18.72813121272366 12.970675944333996 20.920974155069583 2 13.543580829401538 22.528433076732057 40.96250310404768 22.96548298981872 3 18.520504152456972 31.54576638023897 28.728648230055548 21.205081237248507 4 10.176103875476493 17.837714421855146 37.61862690597205 34.36755479669632 5 10.390712633637419 42.116757164553945 33.18823891442242 14.304291287386217 6 27.372851491733545 38.319510415580936 20.528397782377144 13.77924031030837 7 25.975044421723464 34.694606855339046 22.030693177418875 17.299655545518615 8 29.25431064433834 31.40144333376349 20.78489959201501 18.559346429883163 9 29.15702955161358 14.672569709844252 20.734273717229673 35.4361270213125 10 16.693716900688415 28.12182035666602 31.84184795286807 23.342614789777492 11 32.36796259622686 25.276830605974876 22.987239238225705 19.36796755957256 12 23.999384542079454 28.550298794893685 29.732573606781948 17.71774305624491 13 30.06180346992976 22.842463203355752 27.185087741070763 19.910645585643724 14 23.873721830636356 22.58909957311625 28.267149806413183 25.27002878983421 15 24.667619870324586 27.528720224797198 29.388460278216318 18.415199626661902 16 21.68336195856126 28.5340574026825 28.742541721683363 21.04003891707288 17 19.632139399806388 27.462456871943804 29.86918857199593 23.036215156253878 18 20.845287139524498 25.41073112622227 34.006551843946994 19.73742989030625 19 21.49107785471422 28.865063410517955 31.01332737696374 18.630531357804085 20 22.345425937966873 24.613719952549474 34.07404466107121 18.96680944841244 21 24.30571756168504 25.2830488367822 28.528245320573593 21.882988280959164 22 21.778969051696325 28.19447546720274 29.11820911820912 20.908346362891816 23 20.585826396437984 28.322884557155547 30.128711052869317 20.962577993537145 24 19.931198125570866 30.593503038004844 30.055398911878 19.419899924546286 25 22.241251780918482 27.498374213789646 29.694550761761505 20.565823243530364 26 18.954099109385705 27.85775986179096 32.27260541914473 20.915535609678603 27 21.154256612876807 29.841211537602437 30.415014171336672 18.589517678184084 28 19.390672464113408 28.05259396033117 31.45114856949987 21.105585006055552 29 18.93285812145701 29.421604932143318 32.38357143566273 19.261965510736943 30 20.783120570191983 28.39643431475709 31.96360856876253 18.856836546288392 31 19.30071873883175 28.850812055751895 30.514136520668707 21.334332684747647 32 17.580955784541466 30.976631524609367 30.93642662854647 20.505986062302696 33 18.510098628532287 30.388706611139515 30.769421680407817 20.33177307992038 34 17.879197029565354 30.47574608343427 32.64301173480531 19.002045152195063 35 20.224183635984552 30.55916839586581 30.236494871973076 18.980153096176565 36 19.628478668797968 30.850070988175254 30.186852791374193 19.334597551652585 37 20.669714433209734 31.24407447669253 28.79196263259522 19.29424845750252 38 18.693569602660514 33.36261881716427 28.406422951877495 19.53738862829772 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 108.0 1 149.5 2 191.0 3 191.0 4 481.0 5 771.0 6 771.0 7 1046.0 8 1321.0 9 1340.0 10 1359.0 11 1359.0 12 1692.0 13 2025.0 14 2310.5 15 2596.0 16 2596.0 17 3610.5 18 4625.0 19 4625.0 20 5056.5 21 5488.0 22 5043.5 23 4599.0 24 4599.0 25 4670.0 26 4741.0 27 4741.0 28 6400.0 29 8059.0 30 9644.0 31 11229.0 32 11229.0 33 11694.0 34 12159.0 35 12159.0 36 12137.5 37 12116.0 38 12911.0 39 13706.0 40 13706.0 41 14046.0 42 14386.0 43 15627.5 44 16869.0 45 16869.0 46 20113.5 47 23358.0 48 23358.0 49 20095.0 50 16832.0 51 13100.5 52 9369.0 53 9369.0 54 8226.5 55 7084.0 56 7084.0 57 6537.0 58 5990.0 59 5585.5 60 5181.0 61 5181.0 62 4966.5 63 4752.0 64 4408.0 65 4064.0 66 4064.0 67 3543.5 68 3023.0 69 3023.0 70 2588.5 71 2154.0 72 1749.5 73 1345.0 74 1345.0 75 1100.0 76 855.0 77 855.0 78 679.0 79 503.0 80 364.5 81 226.0 82 226.0 83 179.5 84 133.0 85 133.0 86 105.0 87 77.0 88 51.5 89 26.0 90 26.0 91 18.0 92 10.0 93 9.0 94 8.0 95 8.0 96 11.0 97 14.0 98 14.0 99 70.0 100 126.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.13798032539532853 2 0.06353050953453976 3 0.015386295277896348 4 0.0029779926344315507 5 0.0 6 4.963321057385919E-4 7 0.0 8 0.0 9 0.0 10 4.963321057385919E-4 11 4.963321057385919E-4 12 9.926642114771837E-4 13 0.01637895948937353 14 0.008933977903294654 15 0.02580926949840677 16 0.011911970537726203 17 0.02134228054675945 18 0.003970656845908735 19 0.0064523173746016925 20 0.0024816605286929593 21 0.00545965316312451 22 0.0064523173746016925 23 0.009430310009033245 24 0.014889963172157756 25 0.018364287912327897 26 0.02183861265249804 27 0.007444981586078878 28 0.004963321057385919 29 0.011911970537726203 30 9.926642114771837E-4 31 0.006948649480340286 32 0.004963321057385919 33 0.007444981586078878 34 0.012904634749203385 35 0.017867955806589307 36 0.017867955806589307 37 0.009430310009033245 38 0.0064523173746016925 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 201478.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.92098392876642 #Duplication Level Percentage of deduplicated Percentage of total 1 74.37214044161527 29.690090233176825 2 13.141535707181221 10.49246071531383 3 4.795355082554207 5.743058795501246 4 2.1856972349313706 3.490207367553778 5 1.2756116968370799 2.546183702438976 6 0.7559180425701213 1.8106195217343828 7 0.5582355281480008 1.559971808336394 8 0.3841754525561965 1.226932965385799 9 0.28098269345534116 1.0095395030722958 >10 1.8562263775611696 14.81452069208549 >50 0.21260194947284664 6.0095891362828695 >100 0.16411378555798686 12.035557232055112 >500 0.008703003779590213 2.416144690735465 >1k 0.008703003779590213 7.15512363632754 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3556 1.7649569680064325 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2474 1.227925629597276 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2388 1.1852410685037573 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 1970 0.9777742483050258 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1519 0.753928468616921 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1386 0.6879162985536882 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1123 0.5573809547444386 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 988 0.4903761204697287 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA 787 0.39061336721627177 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 758 0.3762197361498526 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAA 686 0.340483824536674 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAA 585 0.29035428185707624 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 559 0.2774496471078728 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATG 505 0.25064771339798886 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTC 445 0.22086778705367335 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAA 443 0.21987512284219615 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 435 0.21590446599628743 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAA 431 0.21391913757333306 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCT 425 0.2109411449389015 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 425 0.2109411449389015 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 394 0.19555484966100517 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTA 389 0.1930731891323122 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 365 0.181161218594586 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 350 0.17371623700850714 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACG 329 0.16329326278799672 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGG 312 0.15485561699044065 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAA 312 0.15485561699044065 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGT 302 0.14989229593305473 No Hit GTATCAACGCAGAGTACATGGGAGTGGTATCAACGCAA 301 0.14939596382731613 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 298 0.14790696751010035 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAAC 295 0.14641797119288458 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 282 0.13996565381828288 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 279 0.1384766575010671 No Hit GTTATATAATTTAAGCTCCATAGGGTCTTCTCGTCTTA 260 0.12904634749203386 No Hit GATATATTTTGATCAACGGACCAAGTTACCCTAGGGAT 256 0.12706101906907952 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAA 254 0.12606835485760232 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 254 0.12606835485760232 No Hit TGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGTTCT 238 0.11812704116578486 No Hit GAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 236 0.11713437695430766 No Hit ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCT 232 0.11514904853135331 No Hit ATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGGT 230 0.11415638431987613 No Hit GTATCAACGCAGAGTACATGGGTGGTATCAACGCAAAA 227 0.11266738800266034 No Hit TATCAACGCAGAGTACATGGGAGTGGTATCAACGCAAA 227 0.11266738800266034 No Hit ACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCT 226 0.11217105589692174 No Hit CCTCTAGCATTACAAGTATTAGAGGCACTGCCTGCCCA 225 0.11167472379118315 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGC 224 0.11117839168544458 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGC 224 0.11117839168544458 No Hit GTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTC 222 0.11018572747396739 No Hit GCCTAAAGGAAAGATCCAAAAAGATAAAAGGAACTCGG 220 0.1091930632624902 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACG 219 0.1086967311567516 No Hit ATCTATAACTTTATAGATGCAACACTGTTAGTATGAGT 217 0.10770406694527442 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATG 208 0.10323707799362708 No Hit GATAGAAACCGACCTGGATTGCTCCGGTCTGAACTCAG 208 0.10323707799362708 No Hit GATTAAAGATAAGAGACAGTTGGACCCTCGTTTAGCCG 207 0.10274074588788851 No Hit CTGTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGC 206 0.10224441378214992 No Hit GTACATGGGAGAAATCGTAAATAGATAGAAACCGACCT 202 0.10025908535919555 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 4.963321057385918E-4 0.0 10 0.0 0.0 0.0 4.963321057385918E-4 0.0 11 0.0 0.0 0.0 4.963321057385918E-4 0.0 12 0.0 0.0 0.0 9.926642114771835E-4 0.0 13 0.0 0.0 0.0 0.0014889963172157754 0.0 14 0.0 0.0 0.0 0.0014889963172157754 0.0 15 0.0 0.0 0.0 0.0014889963172157754 0.0 16 0.0 0.0 0.0 0.001985328422954367 0.0 17 0.0 0.0 0.0 0.001985328422954367 0.0 18 0.0 0.0 0.0 0.002481660528692959 0.0 19 0.0 0.0 0.0 0.0034743247401701426 0.0 20 0.0 0.0 0.0 0.003970656845908734 0.0 21 0.0 0.0 0.0 0.00545965316312451 0.0 22 0.0 0.0 0.0 0.008933977903294652 0.0 23 0.0 0.0 0.0 0.01637895948937353 0.0 24 0.0 0.0 0.0 0.023823941075452406 0.0 25 0.0 0.0 0.0 0.026801933709883957 0.0 26 0.0 0.0 0.0 0.03275791897874706 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTAGA 25 2.8694523E-4 32.032566 1 TTTAGAA 30 8.391518E-4 26.667288 2 TTAGAAA 30 8.403702E-4 26.660666 3 TAGAAAT 30 8.415901E-4 26.65405 4 TCCGGTG 55 7.532253E-8 26.182428 12 ACGATTA 50 9.607975E-7 25.600595 32 CCTTTAG 40 1.5762776E-4 24.024422 1 GCTATTA 60 1.747976E-7 24.000559 9 CGGTGTT 40 1.5869457E-4 24.000559 14 CCGGTGT 40 1.5869457E-4 24.000559 13 TATGGAG 40 1.5923029E-4 23.988644 5 TAGGCAT 40 1.5923029E-4 23.988644 5 GGTTCGT 65 3.7834252E-7 22.154362 18 GAAGCTA 65 3.8015787E-7 22.143364 6 CTGTAGA 45 3.4986564E-4 21.355043 1 CAACGAT 60 4.6877612E-6 21.33383 30 GTTAACA 45 3.5222404E-4 21.33383 23 AACGATT 60 4.6877612E-6 21.33383 31 TTAACAG 45 3.5222404E-4 21.33383 24 TTAGGCA 45 3.5340828E-4 21.32324 4 >>END_MODULE