##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062959_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2782516 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.161654775749717 32.0 32.0 32.0 32.0 32.0 2 30.738673200801003 32.0 32.0 32.0 32.0 32.0 3 30.799628106361293 32.0 32.0 32.0 32.0 32.0 4 30.870058249440433 32.0 32.0 32.0 32.0 32.0 5 30.772745601462848 32.0 32.0 32.0 32.0 32.0 6 34.42815207531601 36.0 36.0 36.0 32.0 36.0 7 34.32758697524111 36.0 36.0 36.0 32.0 36.0 8 34.31390115995739 36.0 36.0 36.0 32.0 36.0 9 34.456656853006415 36.0 36.0 36.0 32.0 36.0 10 34.15717537652973 36.0 36.0 36.0 32.0 36.0 11 34.47490149203095 36.0 36.0 36.0 32.0 36.0 12 34.26672694784145 36.0 36.0 36.0 32.0 36.0 13 34.36835259887095 36.0 36.0 36.0 32.0 36.0 14 34.26579721374468 36.0 36.0 36.0 32.0 36.0 15 34.20487932504251 36.0 36.0 36.0 32.0 36.0 16 34.216215468302785 36.0 36.0 36.0 32.0 36.0 17 34.135809821039665 36.0 36.0 36.0 32.0 36.0 18 34.163737782639885 36.0 36.0 36.0 32.0 36.0 19 34.16071713513956 36.0 36.0 36.0 32.0 36.0 20 34.12897140573495 36.0 36.0 36.0 32.0 36.0 21 34.117665091593366 36.0 36.0 36.0 32.0 36.0 22 34.08717254456039 36.0 36.0 36.0 32.0 36.0 23 34.04499381135634 36.0 36.0 36.0 32.0 36.0 24 34.026825362369884 36.0 36.0 36.0 32.0 36.0 25 34.00819581989825 36.0 36.0 36.0 32.0 36.0 26 33.957421269096024 36.0 36.0 36.0 32.0 36.0 27 33.96942515335042 36.0 36.0 36.0 32.0 36.0 28 33.95542020243549 36.0 36.0 36.0 32.0 36.0 29 33.918629398716845 36.0 36.0 36.0 32.0 36.0 30 33.890579245546114 36.0 36.0 36.0 32.0 36.0 31 33.911813984178345 36.0 36.0 36.0 32.0 36.0 32 33.862913636435515 36.0 36.0 36.0 32.0 36.0 33 33.81185732624718 36.0 36.0 36.0 32.0 36.0 34 33.8148535354334 36.0 36.0 36.0 32.0 36.0 35 33.771314881927005 36.0 36.0 36.0 32.0 36.0 36 33.72630885141361 36.0 36.0 36.0 27.0 36.0 37 33.72510742076595 36.0 36.0 36.0 27.0 36.0 38 33.11966687702784 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 5.0 8 4.0 9 7.0 10 29.0 11 25.0 12 9.0 13 17.0 14 453.0 15 996.0 16 1296.0 17 1409.0 18 1873.0 19 2349.0 20 3103.0 21 4286.0 22 6334.0 23 9710.0 24 14249.0 25 20833.0 26 30172.0 27 42714.0 28 58559.0 29 77923.0 30 104002.0 31 138092.0 32 186540.0 33 276785.0 34 600097.0 35 1200643.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.99914001616338 17.76535898747878 11.898757953051359 25.33674304330648 2 16.459895563272966 20.309067124437348 37.59653852875246 25.63449878353723 3 18.049247570617084 25.357164936373817 28.991283119616647 27.60230437339245 4 12.446135367616456 15.836687106774704 36.50769576896233 35.20948175664651 5 14.399927834862588 36.791389922828586 33.400311302002116 15.408370940306709 6 32.91603579074554 36.19444623140211 17.32541912742717 13.564098850425173 7 29.323543628695624 31.145744048100372 21.670862511073615 17.859849812130392 8 28.17903292177373 32.160768803649944 19.981239925894112 19.67895834868221 9 28.05021365601561 14.051845276387148 19.070767041268493 38.82717402632875 10 16.427672955974842 26.378292902066487 31.193998203054807 26.000035938903864 11 36.70348666914649 21.653755406646287 22.62519968876406 19.01755823544316 12 24.901956415170016 24.220035968482296 28.56270548540919 22.315302130938502 13 29.131329469380418 19.706519297299728 25.59216426292852 25.56998697039134 14 24.146594284366977 19.968629864024408 25.361719808041222 30.523056043567397 15 25.020058550838005 26.754512095521836 23.15295975061254 25.07246960302762 16 25.559771232057415 25.825639204545453 23.912087090541036 24.702502472856093 17 23.713239787372014 25.870397289956532 25.41607535439196 25.000287568279493 18 24.880865823954927 24.605884126716568 26.60393111332905 23.90931893599946 19 25.413974050246203 25.01865363188729 26.086547101319052 23.48082521654746 20 25.776495738168727 23.906221022925763 25.43599489931612 24.881288339589386 21 27.231937479873025 23.96547361641441 24.85030564245296 23.952283261259602 22 25.96303589700829 24.007689982572106 25.25495800089206 24.774316119527544 23 24.158523383216185 23.935610433562452 26.085990772942207 25.819875410279153 24 24.58959472748917 25.27561636272666 25.49753282379531 24.637256085988852 25 24.751297608948832 24.418951560725226 25.75426665324726 25.07548417707869 26 24.49021185921296 25.263363730050692 26.19722795453181 24.049196456204534 27 25.232543094152998 24.892138821398277 25.075944908492314 24.79937317595641 28 24.236930737301467 24.71296735240619 26.295766634595445 24.7543352756969 29 24.27144405754262 24.985479200752206 26.112961754227566 24.630114987477608 30 24.23106836034088 25.11759496728042 26.392702499108694 24.258634173270003 31 24.869067420753982 24.935162675553165 25.07177391181836 25.123995991874487 32 24.406405995548337 25.050398388976724 24.981319620131465 25.561875995343474 33 24.076892167088502 24.631975289384343 25.716587007949578 25.57454553557758 34 25.005804804724928 24.650363851629912 25.897013059552627 24.446818284092533 35 25.775526701813067 24.59195054630048 25.65090757732442 23.981615174562027 36 24.45682433231456 25.453549480951693 25.125273578228907 24.964352608504836 37 25.46793877628039 25.260157677854835 25.133210291651913 24.13869325421286 38 24.259419928362615 25.119197971783525 25.74679784613416 24.874584253719703 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1300.0 1 1106.5 2 913.0 3 913.0 4 2019.0 5 3125.0 6 3125.0 7 3598.5 8 4072.0 9 3901.0 10 3730.0 11 3730.0 12 4885.5 13 6041.0 14 7599.0 15 9157.0 16 9157.0 17 13578.0 18 17999.0 19 17999.0 20 21628.0 21 25257.0 22 25326.0 23 25395.0 24 25395.0 25 27953.0 26 30511.0 27 30511.0 28 38356.5 29 46202.0 30 55613.0 31 65024.0 32 65024.0 33 80462.5 34 95901.0 35 95901.0 36 106513.5 37 117126.0 38 133488.0 39 149850.0 40 149850.0 41 161039.0 42 172228.0 43 196975.0 44 221722.0 45 221722.0 46 226145.5 47 230569.0 48 230569.0 49 243846.0 50 257123.0 51 256247.5 52 255372.0 53 255372.0 54 243161.0 55 230950.0 56 230950.0 57 224020.5 58 217091.0 59 194690.0 60 172289.0 61 172289.0 62 163326.0 63 154363.0 64 126709.0 65 99055.0 66 99055.0 67 83103.5 68 67152.0 69 67152.0 70 53574.5 71 39997.0 72 31222.0 73 22447.0 74 22447.0 75 16831.5 76 11216.0 77 11216.0 78 10827.5 79 10439.0 80 8119.5 81 5800.0 82 5800.0 83 5985.5 84 6171.0 85 6171.0 86 4141.5 87 2112.0 88 1844.5 89 1577.0 90 1577.0 91 1160.0 92 743.0 93 664.5 94 586.0 95 586.0 96 544.5 97 503.0 98 503.0 99 955.5 100 1408.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12197593832344542 2 0.053979923206191806 3 0.01178789268417504 4 0.0028032183822123574 5 3.234482748706566E-4 6 3.234482748706566E-4 7 3.593869720785074E-5 8 3.9532566928635813E-4 9 2.1563218324710445E-4 10 5.750191553256118E-4 11 0.002192260529678895 12 0.002875095776628059 13 0.014052030608269636 14 0.009056551696378385 15 0.023719540157181487 16 0.011069118740018027 17 0.02041318001405922 18 0.00535486588396976 19 0.007762758596895759 20 0.005175172397930506 21 0.006468965497413133 22 0.007008045955530893 23 0.009487816062872594 24 0.013944214516646087 25 0.01710681987093695 26 0.018939693428537338 27 0.008481532541052774 28 0.006001762433711073 29 0.01078160916235522 30 0.003018850565459462 31 0.006037701130918924 32 0.006648658983452386 33 0.00826590035780567 34 0.012147279656253548 35 0.01577708807424647 36 0.014555172369179548 37 0.009379999971249041 38 0.006109578525334626 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2782516.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.706550098692624 #Duplication Level Percentage of deduplicated Percentage of total 1 73.16391357542375 32.709061676760996 2 14.620745734921442 13.072862033570237 3 5.2266725081448 7.009994890045047 4 2.40667764106252 4.303770181262598 5 1.258018161599753 2.8120825983312274 6 0.7665483368806487 2.0561838975494537 7 0.518228345336493 1.6217741038343954 8 0.3603742029887829 1.2888869888155559 9 0.24498093937775287 0.985702737556466 >10 1.2350039354882376 9.679849674145455 >50 0.08582540027380886 2.6761989121803604 >100 0.08721491454087116 8.585249415156534 >500 0.016042076525945026 5.0192201004884325 >1k 0.009593000535612144 7.457327797895502 >5k 8.061344987909365E-5 0.2769995382519166 >10k+ 8.061344987909365E-5 0.4448354541560508 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 12343 0.4435913396365016 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 7686 0.27622482673954074 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 4719 0.16959471212384764 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 3808 0.1368545589674956 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3708 0.13326068924671053 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3497 0.125677624135854 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3301 0.11863363948311528 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3245 0.11662107243947564 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3217 0.11561478891765582 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 3132 0.1125599996549885 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2976 0.1069535628905638 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 2943 0.10576758588270471 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 2900 0.10422222190276714 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 2898 0.10415034450835144 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2799 0.10059241348477421 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2795 0.10044865869594281 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2791 0.1003049039071114 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1563218324710442E-4 2 0.0 0.0 0.0 3.593869720785074E-5 2.1563218324710442E-4 3 0.0 0.0 0.0 3.593869720785074E-5 2.1563218324710442E-4 4 0.0 0.0 0.0 7.187739441570148E-5 2.1563218324710442E-4 5 0.0 0.0 0.0 7.187739441570148E-5 2.1563218324710442E-4 6 0.0 0.0 0.0 7.187739441570148E-5 2.875095776628059E-4 7 0.0 0.0 0.0 7.187739441570148E-5 2.875095776628059E-4 8 0.0 0.0 0.0 7.187739441570148E-5 2.875095776628059E-4 9 0.0 0.0 0.0 1.4375478883140296E-4 2.875095776628059E-4 10 0.0 0.0 0.0 1.4375478883140296E-4 3.234482748706566E-4 11 0.0 0.0 0.0 1.4375478883140296E-4 3.234482748706566E-4 12 0.0 0.0 0.0 1.796934860392537E-4 5.39080458117761E-4 13 0.0 0.0 0.0 1.796934860392537E-4 7.187739441570147E-4 14 0.0 0.0 0.0 1.796934860392537E-4 7.187739441570147E-4 15 0.0 0.0 0.0 1.796934860392537E-4 8.625287329884177E-4 16 0.0 0.0 0.0 1.796934860392537E-4 9.344061274041192E-4 17 0.0 0.0 0.0 1.796934860392537E-4 9.344061274041192E-4 18 0.0 0.0 0.0 2.5157088045495515E-4 0.0010062835218198206 19 0.0 0.0 0.0 2.5157088045495515E-4 0.0010422222190276714 20 0.0 0.0 0.0 3.234482748706566E-4 0.001221915705066925 21 0.0 0.0 0.0 3.593869720785074E-4 0.0012937930994826265 22 0.0 0.0 0.0 6.109578525334625E-4 0.0013297317966904773 23 0.0 0.0 0.0 0.0012578544022747759 0.0013297317966904773 24 0.0 0.0 0.0 0.002156321832471044 0.001365670493898328 25 0.0 0.0 0.0 0.0026594635933809545 0.001365670493898328 26 0.0 0.0 0.0 0.00341417623474582 0.0015453639799375817 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATCGTT 655 0.0 15.876836 28 CGAGCCG 1020 0.0 15.844677 15 ATCGTTT 700 0.0 14.856717 29 TGGATAC 1145 0.0 14.532857 24 GTCTAAT 145 2.0165317E-8 14.353963 1 TACCGTC 650 0.0 14.275745 7 CGGCATC 765 0.0 14.222325 25 ACCGCAG 1190 0.0 13.982794 29 AGGCCCG 1145 0.0 13.974905 10 CGTTTAT 750 0.0 13.86627 31 GTATTAT 255 0.0 13.812712 1 GTATTAG 715 0.0 13.659042 1 ATACCGT 645 0.0 13.640325 6 TCTAGCG 765 0.0 13.593893 28 GTATAAT 320 0.0 13.508596 1 ACCGTCG 655 0.0 13.434005 8 GTTATAT 385 0.0 13.30717 1 GCATTCG 1000 0.0 13.280097 22 AGAACCG 700 0.0 13.253904 5 GTTCAAA 1365 0.0 13.253856 1 >>END_MODULE