##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062959_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2782516 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.148639935942867 32.0 32.0 32.0 32.0 32.0 2 31.291358612133767 32.0 32.0 32.0 32.0 32.0 3 31.37305230230482 32.0 32.0 32.0 32.0 32.0 4 31.484320305795187 32.0 32.0 32.0 32.0 32.0 5 31.402937485354983 32.0 32.0 32.0 32.0 32.0 6 34.9201449335781 36.0 36.0 36.0 36.0 36.0 7 34.94810344307095 36.0 36.0 36.0 36.0 36.0 8 34.89598262867132 36.0 36.0 36.0 36.0 36.0 9 34.99266563067382 36.0 36.0 36.0 36.0 36.0 10 34.84965944490526 36.0 36.0 36.0 32.0 36.0 11 35.030408091094536 36.0 36.0 36.0 36.0 36.0 12 34.91755339412244 36.0 36.0 36.0 32.0 36.0 13 34.970404842236306 36.0 36.0 36.0 36.0 36.0 14 34.91486374202341 36.0 36.0 36.0 32.0 36.0 15 34.89002578960912 36.0 36.0 36.0 32.0 36.0 16 34.8978981612325 36.0 36.0 36.0 32.0 36.0 17 34.86268147245155 36.0 36.0 36.0 32.0 36.0 18 34.85634080810317 36.0 36.0 36.0 32.0 36.0 19 34.857171710782616 36.0 36.0 36.0 32.0 36.0 20 34.840717178266004 36.0 36.0 36.0 32.0 36.0 21 34.82870862198097 36.0 36.0 36.0 32.0 36.0 22 34.81683842968019 36.0 36.0 36.0 32.0 36.0 23 34.76106049345269 36.0 36.0 36.0 32.0 36.0 24 34.736312028394444 36.0 36.0 36.0 32.0 36.0 25 34.72047204760008 36.0 36.0 36.0 32.0 36.0 26 34.65475382711187 36.0 36.0 36.0 32.0 36.0 27 34.64130916048641 36.0 36.0 36.0 32.0 36.0 28 34.611338802723864 36.0 36.0 36.0 32.0 36.0 29 34.58055694917837 36.0 36.0 36.0 32.0 36.0 30 34.55596266113115 36.0 36.0 36.0 32.0 36.0 31 34.547114913265546 36.0 36.0 36.0 32.0 36.0 32 34.516199008379466 36.0 36.0 36.0 32.0 36.0 33 34.472989553339495 36.0 36.0 36.0 32.0 36.0 34 34.45474491431496 36.0 36.0 36.0 32.0 36.0 35 34.419187886071455 36.0 36.0 36.0 32.0 36.0 36 34.38783891988402 36.0 36.0 36.0 32.0 36.0 37 34.38202224174093 36.0 36.0 36.0 32.0 36.0 38 33.95037548750843 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 6.0 20 19.0 21 77.0 22 242.0 23 716.0 24 1924.0 25 4566.0 26 9953.0 27 19021.0 28 32915.0 29 52090.0 30 77525.0 31 111384.0 32 159826.0 33 254979.0 34 618912.0 35 1438359.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.3704202627842 18.920505211008372 12.676029002082103 26.03304552412533 2 15.523360871959046 21.264891199188074 36.78577230103978 26.425975627813102 3 17.110629372840982 26.027235782291996 29.296902515565048 27.56523232930197 4 11.96515953929399 16.692866014594006 36.53472114405976 34.807253302052246 5 13.904183804939057 37.23767886246795 33.19371144450255 15.664425888090449 6 32.90355412407629 36.632987291348755 16.918908584107754 13.544550000467204 7 28.996036299717414 31.289009419942705 21.699794537360454 18.015159742979428 8 27.997287274015875 32.363669166749624 19.844553756935007 19.79448980229949 9 27.851333143330116 13.797144848223247 18.96062009575156 39.39090191269508 10 16.18060252594263 26.58007982789491 31.30531474372198 25.93400290244048 11 36.77723479875373 21.500459856950165 22.612706284208485 19.109599060087614 12 24.673334037734328 24.319120965058115 28.59411623910245 22.413428758105102 13 29.14529358554198 19.60743371724317 25.70279147144432 25.54448122577054 14 23.984767742575425 19.794387525534443 25.457427738061522 30.763416993828606 15 24.998203065139606 26.8178152434703 23.03993939298103 25.144042298409065 16 25.42138122476205 25.767686511056898 23.96043724456571 24.85049501961534 17 23.6829905021211 25.87740735363247 25.414552872292557 25.02504927195387 18 24.87256137970096 24.4561756338508 26.642290646307153 24.02897234014108 19 25.39291777657343 24.868500306916474 26.219040609290296 23.519541307219797 20 25.6495919520319 23.74789578927848 25.744721683541083 24.857790575148535 21 27.102603220467813 23.971407162225542 24.992210284580676 23.93377933272597 22 25.739035181506786 24.047291063869245 25.478299652148973 24.735374102474992 23 24.044551078628896 23.699431521278957 26.34858261270204 25.90743478739011 24 24.49229402454469 25.017897471209512 25.81516153006847 24.674646974177328 25 24.64641687337422 24.223094654689966 26.021324600702815 25.109163871232994 26 24.556875226414117 25.03123077276935 26.330811870712505 24.08108213010402 27 25.238884520340584 24.62275149540919 25.254697547112038 24.88366643713819 28 24.110660998894527 24.448951955712026 26.594779688598376 24.845607356795075 29 24.268503757031407 24.686866131227998 26.385364899968227 24.659265211772365 30 24.231091573238032 24.710945058357257 26.69601899863289 24.36194436977182 31 24.81624544117626 24.599571035710127 25.352702374397847 25.23148114871577 32 24.407119312162088 24.733262989323332 25.324095171420396 25.535522527094184 33 24.02451594168731 24.33984207098899 26.047792717094886 25.587849270228812 34 24.91586750983642 24.346957933036144 26.244880532582744 24.49229402454469 35 25.736743292760938 24.253481381598522 25.910435016366485 24.099340309274055 36 24.506777319519458 25.08179647484507 25.469107814654073 24.9423183909814 37 25.458973102041462 24.904978084582442 25.44308819787559 24.192960615500503 38 24.294441751035844 24.751762166070744 26.016805671707555 24.93699041118586 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 657.0 1 603.5 2 550.0 3 550.0 4 1809.5 5 3069.0 6 3069.0 7 3646.5 8 4224.0 9 4070.5 10 3917.0 11 3917.0 12 5078.0 13 6239.0 14 7933.5 15 9628.0 16 9628.0 17 14813.5 18 19999.0 19 19999.0 20 23182.5 21 26366.0 22 26272.0 23 26178.0 24 26178.0 25 28004.5 26 29831.0 27 29831.0 28 37519.5 29 45208.0 30 54615.0 31 64022.0 32 64022.0 33 80245.0 34 96468.0 35 96468.0 36 106656.0 37 116844.0 38 133585.5 39 150327.0 40 150327.0 41 161433.0 42 172539.0 43 197267.5 44 221996.0 45 221996.0 46 226139.0 47 230282.0 48 230282.0 49 244724.5 50 259167.0 51 257868.5 52 256570.0 53 256570.0 54 243396.5 55 230223.0 56 230223.0 57 224145.0 58 218067.0 59 195358.5 60 172650.0 61 172650.0 62 163454.0 63 154258.0 64 126939.0 65 99620.0 66 99620.0 67 83326.5 68 67033.0 69 67033.0 70 53763.0 71 40493.0 72 31382.5 73 22272.0 74 22272.0 75 16352.0 76 10432.0 77 10432.0 78 10324.5 79 10217.0 80 7745.5 81 5274.0 82 5274.0 83 5228.0 84 5182.0 85 5182.0 86 3296.0 87 1410.0 88 1171.0 89 932.0 90 932.0 91 557.5 92 183.0 93 136.5 94 90.0 95 90.0 96 73.5 97 57.0 98 57.0 99 49.5 100 42.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008373716449429221 2 0.0 3 0.0 4 1.4375478883140296E-4 5 3.593869720785074E-5 6 7.187739441570148E-5 7 5.390804581177611E-4 8 0.002695402290588805 9 0.003845440601240029 10 0.0010781609162355222 11 0.004636091939812745 12 3.593869720785074E-4 13 1.796934860392537E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 3.593869720785074E-5 22 1.0781609162355222E-4 23 7.187739441570148E-5 24 0.0 25 7.187739441570148E-5 26 1.4375478883140296E-4 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.0781609162355222E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2782516.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.80073037693869 #Duplication Level Percentage of deduplicated Percentage of total 1 70.21535755593973 29.350532295161813 2 16.129137652175938 13.484194684222725 3 5.8163316328851815 7.293807311072789 4 2.668741561852403 4.4622138589089015 5 1.43243682832997 2.9938452821509145 6 0.8676987625713555 2.176226521358914 7 0.5735181951793494 1.6781435610072337 8 0.3899665324664167 1.3040708703726713 9 0.2964103566619598 1.1151152459782934 >10 1.3910190954042752 10.241741496056704 >50 0.09384636879704193 2.749257881074264 >100 0.09626767997110243 8.840484867297677 >500 0.018010940163347613 5.244647601718708 >1k 0.010997064426657823 7.9820194187684725 >5k 1.7318211695524133E-4 0.578081443004622 >10k+ 8.659105847762067E-5 0.5056176618453175 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 13969 0.5020276612964669 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 9798 0.3521273552425215 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 6173 0.2218495778640626 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4015 0.1442938692895207 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 4013 0.144221991895105 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3669 0.13185908005560434 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 3659 0.13149969308352583 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 3469 0.1246713406140342 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 3262 0.1172320302920091 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 3209 0.11532727933999301 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 3164 0.11371003796563973 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 3031 0.10893019123699559 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2981 0.10713325637660305 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2962 0.10645042112965389 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2933 0.10540819891062621 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 2911 0.1046175475720535 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2872 0.10321593838094731 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.796934860392537E-4 2 0.0 0.0 0.0 3.593869720785074E-5 1.796934860392537E-4 3 0.0 0.0 0.0 7.187739441570148E-5 1.796934860392537E-4 4 0.0 0.0 0.0 7.187739441570148E-5 1.796934860392537E-4 5 0.0 0.0 0.0 7.187739441570148E-5 1.796934860392537E-4 6 0.0 0.0 0.0 7.187739441570148E-5 2.875095776628059E-4 7 0.0 0.0 0.0 7.187739441570148E-5 2.875095776628059E-4 8 0.0 0.0 0.0 1.0781609162355221E-4 3.234482748706566E-4 9 0.0 0.0 0.0 1.4375478883140296E-4 3.234482748706566E-4 10 3.593869720785074E-5 0.0 0.0 1.4375478883140296E-4 3.593869720785074E-4 11 3.593869720785074E-5 0.0 0.0 1.4375478883140296E-4 3.593869720785074E-4 12 3.593869720785074E-5 0.0 0.0 1.4375478883140296E-4 8.984674301962684E-4 13 3.593869720785074E-5 0.0 0.0 1.4375478883140296E-4 9.703448246119699E-4 14 3.593869720785074E-5 0.0 0.0 1.4375478883140296E-4 0.0010062835218198206 15 3.593869720785074E-5 0.0 0.0 1.4375478883140296E-4 0.0012937930994826265 16 3.593869720785074E-5 0.0 0.0 1.4375478883140296E-4 0.0012937930994826265 17 3.593869720785074E-5 0.0 0.0 1.4375478883140296E-4 0.001365670493898328 18 3.593869720785074E-5 0.0 0.0 2.1563218324710442E-4 0.0014375478883140295 19 3.593869720785074E-5 0.0 0.0 2.1563218324710442E-4 0.0014375478883140295 20 3.593869720785074E-5 0.0 0.0 3.234482748706566E-4 0.0015813026771454323 21 3.593869720785074E-5 0.0 0.0 3.593869720785074E-4 0.0017969348603925368 22 3.593869720785074E-5 0.0 0.0 6.468965497413132E-4 0.0017969348603925368 23 3.593869720785074E-5 0.0 0.0 0.0013297317966904773 0.001904750952016089 24 3.593869720785074E-5 0.0 0.0 0.0022641379240945963 0.0019766283464317906 25 3.593869720785074E-5 0.0 0.0 0.0027672796850045068 0.0019766283464317906 26 3.593869720785074E-5 0.0 0.0 0.00341417623474582 0.002156321832471044 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACCGT 55 0.0013657375 17.453722 25 ATCGTTT 570 0.0 17.402687 29 ACCGTCG 685 0.0 16.58614 8 CGTCGTA 685 0.0 16.350769 10 CTAGCGG 715 0.0 16.111128 29 TCTAGCG 720 0.0 15.999246 28 GTATAGG 255 0.0 15.687791 1 CCGTCGT 720 0.0 15.556779 9 TACCGTC 740 0.0 15.353661 7 CGTTTAT 655 0.0 15.144323 31 ATACCGT 780 0.0 14.976613 6 CGGCATC 675 0.0 14.932628 25 TAGCGGC 775 0.0 14.863813 30 CGGACGA 65 0.0041648615 14.768534 26 GTTTTCG 920 0.0 14.434101 28 CATCGTT 680 0.0 14.352264 28 GTCGTAG 770 0.0 14.337759 11 TCGTTTA 695 0.0 14.272708 30 TACCGTA 90 1.53346E-4 14.224364 7 GTCCTAT 1020 0.0 13.962133 1 >>END_MODULE