##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062957_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1483703 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22946843135048 32.0 32.0 32.0 32.0 32.0 2 31.31256390261393 32.0 32.0 32.0 32.0 32.0 3 31.387033658353456 32.0 32.0 32.0 32.0 32.0 4 31.48413395403258 32.0 32.0 32.0 32.0 32.0 5 31.408978077148863 32.0 32.0 32.0 32.0 32.0 6 34.94405955908966 36.0 36.0 36.0 36.0 36.0 7 34.96868510746423 36.0 36.0 36.0 36.0 36.0 8 34.912719728948446 36.0 36.0 36.0 36.0 36.0 9 35.01247823856931 36.0 36.0 36.0 36.0 36.0 10 34.86250347946995 36.0 36.0 36.0 32.0 36.0 11 35.031511023432586 36.0 36.0 36.0 36.0 36.0 12 34.931059652774174 36.0 36.0 36.0 32.0 36.0 13 34.980384888350294 36.0 36.0 36.0 36.0 36.0 14 34.936399670284416 36.0 36.0 36.0 32.0 36.0 15 34.904286774374654 36.0 36.0 36.0 32.0 36.0 16 34.92150180999836 36.0 36.0 36.0 32.0 36.0 17 34.881401466465995 36.0 36.0 36.0 32.0 36.0 18 34.88691267726762 36.0 36.0 36.0 32.0 36.0 19 34.87622118442842 36.0 36.0 36.0 32.0 36.0 20 34.861563938335365 36.0 36.0 36.0 32.0 36.0 21 34.8555222979262 36.0 36.0 36.0 32.0 36.0 22 34.83739468074136 36.0 36.0 36.0 32.0 36.0 23 34.77734155690189 36.0 36.0 36.0 32.0 36.0 24 34.75787202694879 36.0 36.0 36.0 32.0 36.0 25 34.73250172035778 36.0 36.0 36.0 32.0 36.0 26 34.672747847783555 36.0 36.0 36.0 32.0 36.0 27 34.64966977892476 36.0 36.0 36.0 32.0 36.0 28 34.61192098418619 36.0 36.0 36.0 32.0 36.0 29 34.58728465198224 36.0 36.0 36.0 32.0 36.0 30 34.55128890350697 36.0 36.0 36.0 32.0 36.0 31 34.55837522738715 36.0 36.0 36.0 32.0 36.0 32 34.53276363261381 36.0 36.0 36.0 32.0 36.0 33 34.50066623845878 36.0 36.0 36.0 32.0 36.0 34 34.5008232779741 36.0 36.0 36.0 32.0 36.0 35 34.4716954808341 36.0 36.0 36.0 32.0 36.0 36 34.43172589123295 36.0 36.0 36.0 32.0 36.0 37 34.42310421964504 36.0 36.0 36.0 32.0 36.0 38 33.98661322380557 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 8.0 21 20.0 22 101.0 23 317.0 24 877.0 25 2290.0 26 4738.0 27 9475.0 28 16492.0 29 26831.0 30 40698.0 31 58940.0 32 84858.0 33 135860.0 34 334690.0 35 767508.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.617487664806276 18.541683518024215 11.989538677235839 26.851290139933674 2 15.479647881011227 20.196157856390396 37.78215721070861 26.542037051889768 3 18.166708566337064 23.97319409612301 28.936788562131373 28.923308775408557 4 11.962752502701022 15.815493325119617 36.121323963046365 36.100430209132995 5 13.904678971922934 37.2464955900848 33.49783177484427 15.35099366314799 6 34.776525205196194 35.98896543915153 16.0893494785341 13.145159877118182 7 30.242852983360475 30.36430643474135 20.663869148396977 18.7289714335012 8 27.728875019377625 34.35797717821348 18.904877769315277 19.008270033093613 9 27.425800298584925 13.529334452184285 18.430980039294585 40.61388520993621 10 15.957532850572356 26.638282442130688 31.570249270736166 25.833935436560786 11 38.34914810526046 20.24151509064904 22.516200087083472 18.893136717007025 12 24.999292308812173 23.245094352085125 28.99390576788538 22.761707571217325 13 30.102001614879537 19.08732346522415 25.08374323145753 25.726931688438782 14 23.033129294157455 20.20951646624457 24.60419949558604 32.153154744011935 15 24.787575410981848 28.857527416201222 21.54049698625668 24.81440018656025 16 25.367678032598167 25.434133381141642 24.81143463348123 24.386753952778957 17 23.88314912081461 26.454553236058697 25.26846680231825 24.393830840808437 18 24.87168928013221 24.379609665815867 27.223440270728037 23.525260783323887 19 26.01389900808989 24.41095016994641 24.972787680553317 24.60236314141038 20 26.130431764308625 24.29704597213863 24.890560981544148 24.681961282008597 21 26.935983818864017 23.933496124224323 24.023608498466338 25.106911558445322 22 26.091223170151416 24.92643401437755 24.710487685532538 24.27185512993849 23 23.90912993925326 24.4878179633228 25.87799024196924 25.725061855454705 24 25.3587139744275 24.75515652391348 25.42119278588774 24.464936715771284 25 24.809429386763647 24.710285488595417 25.56915067850552 24.91113444613541 26 23.939157634647902 26.057640916005425 26.104820169535277 23.89838127981139 27 25.134073690148746 24.915498359168538 25.095319198840194 24.855108751842522 28 23.924262470319192 25.269612584189694 25.653921303657135 25.15220364183398 29 24.39106748453026 24.640578336769554 25.457049018570427 25.511305160129755 30 23.80786451196769 25.20854915033534 26.08615066492418 24.897435672772787 31 25.512113947333127 24.50578046954141 24.68735319669772 25.294752386427742 32 24.730825508878798 25.227016458145602 24.683713654282563 25.35844437869304 33 23.970902532380133 24.80334676144754 25.95222898383302 25.27352172233931 34 25.053329406222137 24.944008335900108 25.847423642063134 24.15523861581462 35 25.358376979759427 24.866903955845608 25.803142542678692 23.971576521716273 36 23.901818625425708 25.40515183968759 25.678926308027954 25.014103226858747 37 25.21811979890854 25.08433291568461 24.70480952050377 24.992737764903083 38 24.49966367909459 25.2594523698155 25.203713414149203 25.037170536940707 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 15.0 1 34.0 2 53.0 3 53.0 4 199.0 5 345.0 6 345.0 7 514.0 8 683.0 9 728.5 10 774.0 11 774.0 12 1051.5 13 1329.0 14 1892.0 15 2455.0 16 2455.0 17 3873.0 18 5291.0 19 5291.0 20 6309.0 21 7327.0 22 8563.5 23 9800.0 24 9800.0 25 12614.5 26 15429.0 27 15429.0 28 20451.0 29 25473.0 30 33320.5 31 41168.0 32 41168.0 33 53153.5 34 65139.0 35 65139.0 36 70830.5 37 76522.0 38 85251.0 39 93980.0 40 93980.0 41 93869.5 42 93759.0 43 102469.0 44 111179.0 45 111179.0 46 111592.0 47 112005.0 48 112005.0 49 119298.5 50 126592.0 51 128672.5 52 130753.0 53 130753.0 54 124801.0 55 118849.0 56 118849.0 57 116453.0 58 114057.0 59 102402.5 60 90748.0 61 90748.0 62 87565.0 63 84382.0 64 70386.0 65 56390.0 66 56390.0 67 47751.5 68 39113.0 69 39113.0 70 31583.0 71 24053.0 72 18978.0 73 13903.0 74 13903.0 75 10530.5 76 7158.0 77 7158.0 78 6824.5 79 6491.0 80 5125.0 81 3759.0 82 3759.0 83 3413.0 84 3067.0 85 3067.0 86 1989.0 87 911.0 88 748.0 89 585.0 90 585.0 91 341.5 92 98.0 93 67.0 94 36.0 95 36.0 96 25.5 97 15.0 98 15.0 99 16.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009638047506812346 2 0.0 3 0.0 4 4.0439360168443417E-4 5 6.739893361407236E-5 6 6.739893361407236E-5 7 4.7179253529850654E-4 8 0.002224164809264388 9 0.0025611594773347493 10 0.0010109840042110854 11 0.004650526419370993 12 3.369946680703618E-4 13 6.739893361407236E-5 14 6.739893361407236E-5 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 6.739893361407236E-5 23 1.3479786722814471E-4 24 0.0 25 6.739893361407236E-5 26 0.0 27 2.6959573445628943E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 6.739893361407236E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1483703.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.48303662158321 #Duplication Level Percentage of deduplicated Percentage of total 1 78.89724504269316 41.4076700091769 2 12.939595580815128 13.582185374727935 3 3.807254265409412 5.994487951174833 4 1.5083993656200316 3.166615165832361 5 0.7501033422324226 1.96838505901781 6 0.4434261511876496 1.3963410559049467 7 0.29951220946948054 1.1003517180738636 8 0.22067218052431847 0.9265236905457943 9 0.14500049260771627 0.6849059547310542 >10 0.8035426365634001 7.6610416725822095 >50 0.0784994444907952 2.90272925352854 >100 0.08803273077020192 10.017737947640342 >500 0.012778891062163294 4.618579729096122 >1k 0.00593766655413648 4.57244541796736 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2964 0.19977043923211046 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2219 0.14955823368962656 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2202 0.14841245181818732 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2186 0.14733406888036218 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2011 0.1355392554978995 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1899 0.1279905749331234 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1880 0.12670999519445603 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1849 0.12462062825241979 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1826 0.12307045277929612 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1744 0.1175437402229422 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1692 0.11403899567501044 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1688 0.11376939994055413 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1665 0.11221922446743049 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCA 1643 0.11073644792792088 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1604 0.10810788951697206 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1521 0.10251377802700407 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.739893361407236E-5 2 0.0 0.0 0.0 0.0 6.739893361407236E-5 3 0.0 0.0 0.0 0.0 6.739893361407236E-5 4 0.0 0.0 0.0 0.0 6.739893361407236E-5 5 0.0 0.0 0.0 0.0 6.739893361407236E-5 6 0.0 0.0 0.0 0.0 6.739893361407236E-5 7 0.0 0.0 0.0 0.0 6.739893361407236E-5 8 0.0 0.0 0.0 0.0 6.739893361407236E-5 9 0.0 0.0 0.0 0.0 6.739893361407236E-5 10 0.0 0.0 0.0 0.0 6.739893361407236E-5 11 0.0 0.0 0.0 0.0 6.739893361407236E-5 12 0.0 0.0 0.0 0.0 1.3479786722814471E-4 13 0.0 0.0 0.0 0.0 2.0219680084221709E-4 14 0.0 0.0 0.0 0.0 2.0219680084221709E-4 15 0.0 0.0 0.0 0.0 2.6959573445628943E-4 16 0.0 0.0 0.0 1.3479786722814471E-4 2.6959573445628943E-4 17 0.0 0.0 0.0 1.3479786722814471E-4 2.6959573445628943E-4 18 0.0 0.0 0.0 2.0219680084221709E-4 2.6959573445628943E-4 19 0.0 0.0 0.0 2.0219680084221709E-4 2.6959573445628943E-4 20 0.0 0.0 0.0 2.0219680084221709E-4 2.6959573445628943E-4 21 0.0 0.0 0.0 2.0219680084221709E-4 2.6959573445628943E-4 22 0.0 0.0 0.0 2.0219680084221709E-4 4.0439360168443417E-4 23 0.0 0.0 0.0 4.0439360168443417E-4 4.0439360168443417E-4 24 0.0 0.0 0.0 9.43585070597013E-4 4.0439360168443417E-4 25 0.0 0.0 0.0 0.0010783829378251577 4.0439360168443417E-4 26 0.0 0.0 0.0 0.0012131808050533024 4.717925352985065E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 400 0.0 20.7984 28 TATACCG 55 5.8245925E-5 20.368248 5 TAGCGGC 425 0.0 20.327848 30 CTAGCGG 420 0.0 20.188925 29 ATTTAGA 425 0.0 18.449371 1 TAGCCCG 55 0.001362829 17.4585 5 CGCACGA 55 0.0013656022 17.453205 28 AGCGGCG 490 0.0 17.30479 31 AACCGCG 315 0.0 17.273752 7 GTCACGC 65 2.1021569E-4 17.229445 24 AGAACCG 400 0.0 17.203897 5 TATACTG 140 4.0017767E-11 17.14674 5 GTCCTAC 1130 0.0 17.13489 1 TCGTTTA 340 0.0 16.939875 30 GATATAC 350 0.0 16.916407 1 CAAGACG 615 0.0 16.651932 4 TGTAGGA 1415 0.0 16.282532 2 ATCGTTT 355 0.0 16.224104 29 AAGACGG 645 0.0 16.127682 5 TCACGCA 60 0.002443609 15.998769 25 >>END_MODULE