##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062954_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1525771 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.212823549536594 32.0 32.0 32.0 32.0 32.0 2 31.302439881214152 32.0 32.0 32.0 32.0 32.0 3 31.376731501647363 32.0 32.0 32.0 32.0 32.0 4 31.470878657413202 32.0 32.0 32.0 32.0 32.0 5 31.3983435259944 32.0 32.0 32.0 32.0 32.0 6 34.921444305862416 36.0 36.0 36.0 36.0 36.0 7 34.944905231519016 36.0 36.0 36.0 36.0 36.0 8 34.8793901575007 36.0 36.0 36.0 32.0 36.0 9 34.97988295753426 36.0 36.0 36.0 36.0 36.0 10 34.83433031562404 36.0 36.0 36.0 32.0 36.0 11 35.009393939195334 36.0 36.0 36.0 36.0 36.0 12 34.898757415103574 36.0 36.0 36.0 32.0 36.0 13 34.953519892565794 36.0 36.0 36.0 36.0 36.0 14 34.89557017403005 36.0 36.0 36.0 32.0 36.0 15 34.872227221516205 36.0 36.0 36.0 32.0 36.0 16 34.8848143004422 36.0 36.0 36.0 32.0 36.0 17 34.839996303508194 36.0 36.0 36.0 32.0 36.0 18 34.845174669068946 36.0 36.0 36.0 32.0 36.0 19 34.840962372466116 36.0 36.0 36.0 32.0 36.0 20 34.82647068269092 36.0 36.0 36.0 32.0 36.0 21 34.82061987021643 36.0 36.0 36.0 32.0 36.0 22 34.80262372269495 36.0 36.0 36.0 32.0 36.0 23 34.74387178678845 36.0 36.0 36.0 32.0 36.0 24 34.70851392509098 36.0 36.0 36.0 32.0 36.0 25 34.69545233196856 36.0 36.0 36.0 32.0 36.0 26 34.62534285944614 36.0 36.0 36.0 32.0 36.0 27 34.61619535303791 36.0 36.0 36.0 32.0 36.0 28 34.57923436741162 36.0 36.0 36.0 32.0 36.0 29 34.5460347588203 36.0 36.0 36.0 32.0 36.0 30 34.523722760492895 36.0 36.0 36.0 32.0 36.0 31 34.53474735068369 36.0 36.0 36.0 32.0 36.0 32 34.49877733945657 36.0 36.0 36.0 32.0 36.0 33 34.45866581551229 36.0 36.0 36.0 32.0 36.0 34 34.45402029531299 36.0 36.0 36.0 32.0 36.0 35 34.42450538121383 36.0 36.0 36.0 32.0 36.0 36 34.39450546641665 36.0 36.0 36.0 32.0 36.0 37 34.391908746463265 36.0 36.0 36.0 32.0 36.0 38 33.95527441536115 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 9.0 21 33.0 22 130.0 23 402.0 24 1067.0 25 2621.0 26 5554.0 27 10510.0 28 18216.0 29 28753.0 30 42842.0 31 61927.0 32 88497.0 33 140744.0 34 342243.0 35 782220.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.85598171995506 18.382234376290477 12.02682489096079 26.734959012793674 2 16.05129472247146 20.582118810752075 35.952970662045615 27.413615804730856 3 17.80162291720055 24.225850406122543 28.76624342709358 29.206283249583326 4 12.227260840584858 15.848774160735784 35.75333388824404 36.170631110435316 5 14.562810908590418 36.53558531102329 32.87625264620487 16.025351134181427 6 34.70193371469319 35.62127400758175 16.2096072273111 13.467185050413955 7 30.460674127846772 30.382156087048852 20.761467697494503 18.39570208760988 8 28.533002303141686 32.12659807490388 19.31368475141931 20.026714870535123 9 27.60618178171591 13.856115419126452 18.365822053877903 40.171880745279736 10 16.201782982622408 26.058391959930738 30.634281452235545 27.105543605211313 11 38.25980149582719 20.818752699561056 21.775749142530927 19.145696662080827 12 25.130754166437274 23.586282020024065 27.779066749510413 23.50389706402825 13 29.475543496070838 18.5931038098796 25.25531371045439 26.67603898359517 14 24.030146070412925 19.524948370364882 24.26071802387121 32.18418753535098 15 25.529781336779894 26.713641824362895 21.82050910654351 25.936067732313695 16 26.604337482058238 25.251905595207663 22.943300759616456 25.20045616311764 17 24.654682780050216 25.580706410070714 24.40510404248082 25.359506767398255 18 25.880096030138205 23.85620122547879 25.566549632939672 24.697153111443328 19 26.172603883544777 24.51508122778582 24.809162056429177 24.503152832240225 20 26.21055191113214 23.615404932981424 24.410937158983884 25.763105996902553 21 27.73755398097615 23.724102403443773 23.750777476800224 24.787566138779855 22 26.37594550682312 23.635622430394115 24.451801026236605 25.536631036546158 23 24.51239278343286 23.19023809008846 25.284594567846856 27.012774558631826 24 25.327850640758015 24.570135361073188 24.531335305232567 25.570678692936227 25 25.296260054752643 23.821333607730125 24.83636141989853 26.046044917618698 26 25.315348971339063 24.73708357091829 25.11918572261874 24.828381735123905 27 26.081471048369707 24.00199505954047 24.17069687482181 25.745837017268013 28 25.04130698512424 23.926460786055053 25.426948080675277 25.60528414814543 29 24.954531184561773 24.227751084533654 25.257787702086354 25.55993002881822 30 24.868869574792026 24.47208657131378 25.588243583080295 25.070800270813905 31 25.69625454933932 24.17872668965395 23.981908163151612 26.143110597855117 32 25.28334854968406 24.21837877374783 24.004191979006023 26.494080697562083 33 24.84435737735217 23.692218557044274 24.916976400783604 26.54644766481995 34 25.8430000308041 23.832475515657332 25.068637429863326 25.255887023675243 35 26.714952637060215 23.688023956412856 24.929298040138395 24.667725366388535 36 25.208697766571785 24.58455430074369 24.370564127906484 25.836183804778045 37 26.41248260715402 24.307710659070068 24.228734194056646 25.051072539719264 38 25.23701132083386 23.850761352784918 25.06935837684685 25.842868949534363 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 207.0 1 179.0 2 151.0 3 151.0 4 467.0 5 783.0 6 783.0 7 917.5 8 1052.0 9 967.0 10 882.0 11 882.0 12 1215.0 13 1548.0 14 2154.0 15 2760.0 16 2760.0 17 4264.0 18 5768.0 19 5768.0 20 6767.0 21 7766.0 22 8514.5 23 9263.0 24 9263.0 25 10823.5 26 12384.0 27 12384.0 28 15763.0 29 19142.0 30 23423.0 31 27704.0 32 27704.0 33 37653.5 34 47603.0 35 47603.0 36 53003.0 37 58403.0 38 67812.0 39 77221.0 40 77221.0 41 82632.0 42 88043.0 43 102165.5 44 116288.0 45 116288.0 46 119461.5 47 122635.0 48 122635.0 49 132658.0 50 142681.0 51 145945.0 52 149209.0 53 149209.0 54 142970.5 55 136732.0 56 136732.0 57 133577.0 58 130422.0 59 117236.5 60 104051.0 61 104051.0 62 100307.5 63 96564.0 64 79278.5 65 61993.0 66 61993.0 67 51925.0 68 41857.0 69 41857.0 70 33607.0 71 25357.0 72 19568.0 73 13779.0 74 13779.0 75 10279.0 76 6779.0 77 6779.0 78 6973.5 79 7168.0 80 5548.0 81 3928.0 82 3928.0 83 3895.0 84 3862.0 85 3862.0 86 2396.0 87 930.0 88 800.5 89 671.0 90 671.0 91 390.0 92 109.0 93 76.5 94 44.0 95 44.0 96 30.0 97 16.0 98 16.0 99 16.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.011338529831803069 2 0.0 3 0.0 4 0.0 5 6.554063486591369E-5 6 1.9662190459774107E-4 7 4.587844440613958E-4 8 0.0019006784111114969 9 0.004063519361686649 10 8.52028253256878E-4 11 0.003932438091954821 12 4.587844440613958E-4 13 6.554063486591369E-5 14 0.0 15 0.0 16 6.554063486591369E-5 17 0.0 18 0.0 19 0.0 20 0.0 21 1.3108126973182738E-4 22 1.3108126973182738E-4 23 2.6216253946365477E-4 24 0.0 25 0.0 26 6.554063486591369E-5 27 1.3108126973182738E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1525771.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.82611818919897 #Duplication Level Percentage of deduplicated Percentage of total 1 79.82787843704494 38.97685427360164 2 11.83253135616858 11.554731489473797 3 3.393482923151011 4.97071794836399 4 1.4957470853534616 2.92126095882472 5 0.8013251072889728 1.9562797198231965 6 0.5273206000109263 1.544821076383968 7 0.3569178904168717 1.219884057093362 8 0.2741812065102232 1.0709763195460262 9 0.19499524590784834 0.8568774830725668 >10 1.0871171255739052 9.516196987527426 >50 0.085257899803826 2.987829492275157 >100 0.09919075420504063 10.839818083724296 >500 0.01635156514776694 5.632232355700055 >1k 0.007702803416716657 5.951519754589847 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3457 0.22657397473146365 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2582 0.16922591922378916 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2577 0.1688982160494596 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2499 0.16378604652991832 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2424 0.1588704989149748 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2353 0.1542171138394949 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2313 0.15159548844485837 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2237 0.14661440019504893 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2202 0.14432047797474196 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 2159 0.14150223067550766 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2112 0.1384218208368097 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2052 0.1344893827448549 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1970 0.12911505068584997 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1932 0.12662450656094526 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1919 0.12577247830768837 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1900 0.12452720624523601 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1831 0.12000490243948797 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1794 0.11757989894944916 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1618 0.10604474721304835 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1611 0.10558596276898696 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1609 0.10545488149925512 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 1562 0.10237447166055719 No Hit CTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGT 1545 0.10126028086783664 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1544 0.10119474023297073 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.3108126973182738E-4 13 0.0 0.0 0.0 0.0 1.9662190459774107E-4 14 0.0 0.0 0.0 0.0 1.9662190459774107E-4 15 0.0 0.0 0.0 6.554063486591369E-5 3.2770317432956846E-4 16 0.0 0.0 0.0 1.9662190459774107E-4 3.2770317432956846E-4 17 0.0 0.0 0.0 2.6216253946365477E-4 3.2770317432956846E-4 18 0.0 0.0 0.0 3.9324380919548215E-4 3.9324380919548215E-4 19 0.0 0.0 0.0 3.9324380919548215E-4 3.9324380919548215E-4 20 0.0 0.0 0.0 4.5878444406139584E-4 5.898657137932233E-4 21 0.0 0.0 0.0 6.554063486591369E-4 5.898657137932233E-4 22 0.0 0.0 0.0 9.831095229887053E-4 5.898657137932233E-4 23 0.0 0.0 0.0 0.00124527206245236 5.898657137932233E-4 24 6.554063486591369E-5 0.0 0.0 0.0020317596808433246 6.554063486591369E-4 25 6.554063486591369E-5 0.0 0.0 0.002359462855172893 6.554063486591369E-4 26 6.554063486591369E-5 0.0 0.0 0.003145950473563857 6.554063486591369E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTCG 540 0.0 18.075405 8 ATACCGT 540 0.0 17.778505 6 TAGGACG 45 0.008851145 17.777925 4 TACCGTC 550 0.0 17.746763 7 TAGACCG 65 2.1003136E-4 17.231476 5 CGTCGTA 570 0.0 16.842794 10 CGTTTAT 430 0.0 16.743774 31 TCTAGCG 570 0.0 16.560995 28 CCGTCGT 580 0.0 16.552944 9 GAACTCG 165 1.8189894E-12 16.484444 31 CTAGCGG 575 0.0 16.416988 29 ATCGTTT 420 0.0 16.38055 29 TAGCGGC 605 0.0 15.602922 30 AGATACC 610 0.0 15.475536 4 GTATCAA 3135 0.0 15.261093 1 CAAGACG 570 0.0 15.158018 4 CATCGTT 455 0.0 15.120507 28 GTCGTAG 625 0.0 15.10462 11 TAATACC 85 9.43475E-5 15.058947 4 GATATGC 75 6.242518E-4 14.934435 1 >>END_MODULE