##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062953_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1478470 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.255267945917062 32.0 32.0 32.0 32.0 32.0 2 30.82856669394712 32.0 32.0 32.0 32.0 32.0 3 30.879214322914905 32.0 32.0 32.0 32.0 32.0 4 30.9537264875175 32.0 32.0 32.0 32.0 32.0 5 30.833039561167965 32.0 32.0 32.0 32.0 32.0 6 34.509789850318235 36.0 36.0 36.0 32.0 36.0 7 34.43384444730025 36.0 36.0 36.0 32.0 36.0 8 34.408938970692674 36.0 36.0 36.0 32.0 36.0 9 34.57562615406467 36.0 36.0 36.0 32.0 36.0 10 34.24315407143872 36.0 36.0 36.0 32.0 36.0 11 34.549081144696885 36.0 36.0 36.0 32.0 36.0 12 34.33561519679128 36.0 36.0 36.0 32.0 36.0 13 34.45558246024606 36.0 36.0 36.0 32.0 36.0 14 34.330547796032384 36.0 36.0 36.0 32.0 36.0 15 34.25134226599119 36.0 36.0 36.0 32.0 36.0 16 34.27807666033129 36.0 36.0 36.0 32.0 36.0 17 34.18425399230286 36.0 36.0 36.0 32.0 36.0 18 34.232233998660774 36.0 36.0 36.0 32.0 36.0 19 34.209519300357805 36.0 36.0 36.0 32.0 36.0 20 34.19329509560559 36.0 36.0 36.0 32.0 36.0 21 34.166566112264704 36.0 36.0 36.0 32.0 36.0 22 34.14015705425203 36.0 36.0 36.0 32.0 36.0 23 34.08022685614182 36.0 36.0 36.0 32.0 36.0 24 34.05891157750918 36.0 36.0 36.0 32.0 36.0 25 34.039209453015616 36.0 36.0 36.0 32.0 36.0 26 33.98277611314399 36.0 36.0 36.0 32.0 36.0 27 33.97811183182615 36.0 36.0 36.0 32.0 36.0 28 33.96857697484562 36.0 36.0 36.0 32.0 36.0 29 33.92812231563711 36.0 36.0 36.0 32.0 36.0 30 33.89053819150879 36.0 36.0 36.0 32.0 36.0 31 33.914249190041055 36.0 36.0 36.0 32.0 36.0 32 33.86289204380204 36.0 36.0 36.0 32.0 36.0 33 33.830853517487675 36.0 36.0 36.0 32.0 36.0 34 33.841373176324176 36.0 36.0 36.0 32.0 36.0 35 33.79875208830751 36.0 36.0 36.0 32.0 36.0 36 33.747118304733945 36.0 36.0 36.0 32.0 36.0 37 33.74780076700914 36.0 36.0 36.0 32.0 36.0 38 33.11084634791372 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 2.0 8 6.0 9 8.0 10 10.0 11 13.0 12 11.0 13 11.0 14 116.0 15 323.0 16 384.0 17 477.0 18 629.0 19 848.0 20 1232.0 21 1730.0 22 2807.0 23 4486.0 24 6695.0 25 10093.0 26 14969.0 27 21557.0 28 30662.0 29 40895.0 30 54950.0 31 73500.0 32 101769.0 33 152438.0 34 332357.0 35 625490.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.21457823010851 16.895311455581375 11.199249085228962 25.69086122908115 2 17.039412197431172 18.847769989828368 37.90885324494007 26.20396456780039 3 19.83678207416918 22.908347533500333 27.69874765688789 29.556122735442603 4 12.341512082114413 14.535739046620558 35.815546950301844 37.30720192096319 5 14.806735886920864 36.34455642965798 33.17918738911671 15.669520294304446 6 35.44356109643373 35.30382166380559 16.146465322841376 13.106151916919293 7 31.373759864941274 29.6496779098364 19.945105338769594 19.031456886452734 8 28.682402818059828 32.985652677373274 18.71699277087572 19.614951733691182 9 27.540591086025035 13.66099298935044 18.2410811212981 40.55733480332642 10 16.447903294098868 25.518139796626492 30.36655659732885 27.667400311945794 11 39.307090683176035 20.32293651453938 21.61004252475425 18.75993027753033 12 25.82601472919812 22.97622332970785 27.982094446518722 23.215667494575303 13 29.935633567956817 18.398923054547424 25.216894243550676 26.448549133945093 14 23.64784834769527 20.048040727064137 23.84834498951181 32.455765935728785 15 25.282979807307846 28.003888752453303 21.454439422261824 25.258692017977026 16 26.416317054791094 25.142764759122944 23.906552499956028 24.534365686129934 17 24.249113589729888 25.917682405001376 24.752444435724854 25.080759569543883 18 25.785131457815737 23.811082784366434 26.570719495556972 23.833066262260864 19 26.289248360663496 24.133454910974592 24.621569298579086 24.955727429782822 20 26.378824374534542 23.58556229491896 24.44102628622295 25.594587044323546 21 28.008704186843747 23.42351605045831 23.45368443196523 25.114095330732724 22 26.693800300602966 24.02868850795678 24.600402337181286 24.677108854258968 23 24.428459429531586 23.753846403608396 25.520300284983925 26.29739388187609 24 25.36485808180776 24.51554071514484 25.003619154051492 25.115982048995907 25 25.15513685123436 24.27359828874227 25.062321955390672 25.508942904632693 26 24.36665358751979 25.917209000257074 25.754103018576895 23.96203439364624 27 25.652573597801315 24.297201115576332 24.8707502135843 25.17947507303805 28 24.390243902439025 24.682388401342553 25.444507426382156 25.482860269836266 29 24.317320258785138 24.37454846539114 25.45884033736231 25.84929093846141 30 24.037724005730436 25.01207368396845 25.961802516466882 24.988399793834237 31 25.836427957818408 24.653368236639 23.915663873049372 25.59453993249322 32 25.162019985565152 24.626090815068245 24.05004981848215 26.161839380884448 33 24.345853248715787 24.1943993863379 25.39074284771142 26.069004517234895 34 25.77048585931835 24.604813135194227 25.19407584990205 24.430625155585382 35 26.249950109556032 24.243846901617395 25.47937106246013 24.02683192636644 36 24.031597183935144 25.350536755707658 24.9952477045229 25.622618355834298 37 25.89136474234656 24.882721840896746 24.432684873332825 24.793228543423865 38 24.70487966557989 24.715431756381985 24.891502861240006 25.688185716798117 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 48.0 1 83.0 2 118.0 3 118.0 4 301.5 5 485.0 6 485.0 7 625.5 8 766.0 9 783.5 10 801.0 11 801.0 12 1062.0 13 1323.0 14 1803.0 15 2283.0 16 2283.0 17 3334.5 18 4386.0 19 4386.0 20 5639.0 21 6892.0 22 7611.0 23 8330.0 24 8330.0 25 11002.0 26 13674.0 27 13674.0 28 18458.5 29 23243.0 30 29784.0 31 36325.0 32 36325.0 33 47034.0 34 57743.0 35 57743.0 36 62776.0 37 67809.0 38 76516.5 39 85224.0 40 85224.0 41 85913.0 42 86602.0 43 97797.5 44 108993.0 45 108993.0 46 108039.5 47 107086.0 48 107086.0 49 115571.5 50 124057.0 51 128925.0 52 133793.0 53 133793.0 54 127514.0 55 121235.0 56 121235.0 57 119096.0 58 116957.0 59 105325.0 60 93693.0 61 93693.0 62 93084.5 63 92476.0 64 78158.0 65 63840.0 66 63840.0 67 54550.0 68 45260.0 69 45260.0 70 36667.0 71 28074.0 72 22061.0 73 16048.0 74 16048.0 75 12252.5 76 8457.0 77 8457.0 78 8202.5 79 7948.0 80 6285.0 81 4622.0 82 4622.0 83 4694.5 84 4767.0 85 4767.0 86 3223.5 87 1680.0 88 1453.0 89 1226.0 90 1226.0 91 907.5 92 589.0 93 487.0 94 385.0 95 385.0 96 371.0 97 357.0 98 357.0 99 616.0 100 875.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12654974399209992 2 0.05620675427976218 3 0.01359513551171143 4 0.0030436870548607685 5 6.763749010801707E-5 6 2.7054996043206827E-4 7 1.3527498021603413E-4 8 4.0582494064810243E-4 9 3.381874505400854E-4 10 5.410999208641365E-4 11 0.0025025871339966316 12 0.0031113245449687858 13 0.01454206037322367 14 0.009536886105230407 15 0.024417133928994163 16 0.0110925483777148 17 0.021441084364241414 18 0.005884461639397485 19 0.008657598733826185 20 0.006155011599829554 21 0.0068313865009097235 22 0.0073048489316658435 23 0.009536886105230407 24 0.015150797784195823 25 0.017518109937976423 26 0.019614872131324953 27 0.008860511204150236 28 0.0062226490899375715 29 0.01203947323922704 30 0.0032465995251848194 31 0.006763749010801707 32 0.006966661481125759 33 0.008928148694258254 34 0.012310023199659108 35 0.015624260214951944 36 0.016030085155600046 37 0.00994271104587851 38 0.006087374109721537 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1478470.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.46806623163274 #Duplication Level Percentage of deduplicated Percentage of total 1 75.82050254289209 34.474116313358955 2 13.919930610488876 12.658246538748802 3 4.689045795556882 6.396055343866179 4 2.01122124024159 3.6578536223108458 5 1.0364433978163299 2.3562538528625683 6 0.5777715811151232 1.5762093910138553 7 0.3806091781328218 1.2113894323797312 8 0.24398873146427327 0.8874956641591707 9 0.17832605901489998 0.7297326955903968 >10 0.905859768473149 7.57264517866514 >50 0.09385271815287527 3.0380083047709077 >100 0.11109184767727183 10.9503570765608 >500 0.02135230306319817 6.768914706603919 >1k 0.010004225910729213 7.722721879108768 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3470 0.23470209067481926 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3293 0.22273025492570023 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 3014 0.20385939518556348 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3012 0.20372412020534741 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2805 0.1897231597529879 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2638 0.17842769890494903 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2600 0.1758574742808444 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2549 0.1724079622853355 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2445 0.16537366331410172 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 2428 0.16422382598226545 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2380 0.16097722645708062 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2249 0.1521167152529304 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 2233 0.15103451541120214 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2180 0.1474497284354772 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2130 0.14406785393007637 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2104 0.1423092791872679 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 2092 0.1414976293059717 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 2043 0.13818339229067889 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2005 0.13561316766657422 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1838 0.12431770681853536 No Hit ACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGG 1834 0.12404715685810332 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1773 0.11992126996151425 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCC 1760 0.11904198259011003 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTAT 1695 0.11464554573308892 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1677 0.11342807091114462 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 1668 0.11281933350017247 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1653 0.11180477114855222 No Hit CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTC 1633 0.11045202134639187 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1632 0.11038438385628387 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1607 0.10869344660358343 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACG 1601 0.10828762166293533 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 1594 0.10781415923217923 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGG 1535 0.1038235473158062 No Hit CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGG 1519 0.10274134747407793 No Hit GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTC 1513 0.10233552253342981 No Hit GTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATT 1489 0.10071222277083741 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.763749010801707E-5 0.0 8 0.0 0.0 0.0 6.763749010801707E-5 0.0 9 0.0 0.0 0.0 6.763749010801707E-5 0.0 10 0.0 0.0 0.0 6.763749010801707E-5 0.0 11 0.0 0.0 0.0 6.763749010801707E-5 0.0 12 0.0 0.0 0.0 6.763749010801707E-5 0.0 13 0.0 0.0 0.0 6.763749010801707E-5 0.0 14 0.0 0.0 0.0 6.763749010801707E-5 0.0 15 0.0 0.0 0.0 6.763749010801707E-5 0.0 16 0.0 0.0 0.0 6.763749010801707E-5 0.0 17 0.0 0.0 0.0 1.3527498021603413E-4 0.0 18 0.0 0.0 0.0 2.7054996043206827E-4 0.0 19 0.0 0.0 0.0 3.381874505400854E-4 0.0 20 0.0 0.0 0.0 3.381874505400854E-4 6.763749010801707E-5 21 0.0 0.0 0.0 5.410999208641365E-4 6.763749010801707E-5 22 0.0 0.0 0.0 7.440123911881878E-4 6.763749010801707E-5 23 0.0 0.0 0.0 0.001014562351620256 6.763749010801707E-5 24 0.0 0.0 0.0 0.0016232997625924097 6.763749010801707E-5 25 0.0 0.0 0.0 0.001893849723024478 6.763749010801707E-5 26 0.0 0.0 0.0 0.002570224624104649 6.763749010801707E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 615 0.0 20.291996 28 TAGCGGC 600 0.0 20.26598 30 CTAGCGG 600 0.0 20.26598 29 ATCGTTT 445 0.0 19.774612 29 CGTTTAT 475 0.0 18.86252 31 CGCTTAC 120 8.367351E-11 18.664772 18 CCTTATA 95 3.77986E-8 18.53133 2 AGCGGCG 665 0.0 18.525688 31 CATCGTT 480 0.0 18.332712 28 GCATCGT 520 0.0 17.845549 27 GGCGTAT 45 0.008853164 17.777178 29 TCGTTTA 495 0.0 17.777176 30 TAGGACG 720 0.0 17.77357 4 GGCATCG 540 0.0 17.48089 26 TAGATCG 55 0.0013673734 17.449821 5 GTCCTAC 975 0.0 17.412542 1 GCGGCGC 725 0.0 17.21321 32 CGGTCCA 765 0.0 17.150908 10 GTCCTAA 425 0.0 16.958385 1 ACCTCTA 740 0.0 16.864864 25 >>END_MODULE