##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062948_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 875677 Sequences flagged as poor quality 0 Sequence length 38 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.189705793346178 32.0 32.0 32.0 32.0 32.0 2 30.799328976323462 32.0 32.0 32.0 32.0 32.0 3 30.861539129153787 32.0 32.0 32.0 32.0 32.0 4 30.91631046607368 32.0 32.0 32.0 32.0 32.0 5 30.819873081056144 32.0 32.0 32.0 32.0 32.0 6 34.48403806426342 36.0 36.0 36.0 32.0 36.0 7 34.37784479893842 36.0 36.0 36.0 32.0 36.0 8 34.363331456690084 36.0 36.0 36.0 32.0 36.0 9 34.50559509956297 36.0 36.0 36.0 32.0 36.0 10 34.20623471896601 36.0 36.0 36.0 32.0 36.0 11 34.51018354941377 36.0 36.0 36.0 32.0 36.0 12 34.297809580473164 36.0 36.0 36.0 32.0 36.0 13 34.400305135341 36.0 36.0 36.0 32.0 36.0 14 34.282977627595564 36.0 36.0 36.0 32.0 36.0 15 34.22357558780235 36.0 36.0 36.0 32.0 36.0 16 34.234737237588746 36.0 36.0 36.0 32.0 36.0 17 34.12625431523267 36.0 36.0 36.0 32.0 36.0 18 34.17092032792913 36.0 36.0 36.0 32.0 36.0 19 34.1640707703868 36.0 36.0 36.0 32.0 36.0 20 34.13112825847887 36.0 36.0 36.0 32.0 36.0 21 34.09451201755898 36.0 36.0 36.0 32.0 36.0 22 34.07092797915213 36.0 36.0 36.0 32.0 36.0 23 34.014913033001896 36.0 36.0 36.0 32.0 36.0 24 33.98455709125625 36.0 36.0 36.0 32.0 36.0 25 33.95826200756672 36.0 36.0 36.0 32.0 36.0 26 33.893624018901946 36.0 36.0 36.0 32.0 36.0 27 33.89321290841258 36.0 36.0 36.0 32.0 36.0 28 33.880211539186256 36.0 36.0 36.0 32.0 36.0 29 33.8387133612051 36.0 36.0 36.0 32.0 36.0 30 33.803553136601735 36.0 36.0 36.0 32.0 36.0 31 33.81466796547129 36.0 36.0 36.0 32.0 36.0 32 33.77502321061304 36.0 36.0 36.0 32.0 36.0 33 33.70371038636392 36.0 36.0 36.0 27.0 36.0 34 33.703589337164274 36.0 36.0 36.0 27.0 36.0 35 33.63659203107995 36.0 36.0 36.0 27.0 36.0 36 33.58689334080945 36.0 36.0 36.0 27.0 36.0 37 33.58181041639783 36.0 36.0 36.0 27.0 36.0 38 32.931140135004114 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 5.0 10 9.0 11 10.0 12 4.0 13 5.0 14 115.0 15 222.0 16 307.0 17 381.0 18 461.0 19 611.0 20 885.0 21 1272.0 22 1970.0 23 2958.0 24 4299.0 25 6499.0 26 9618.0 27 13371.0 28 18644.0 29 25406.0 30 34140.0 31 45537.0 32 60931.0 33 89341.0 34 192387.0 35 366286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.46745487705176 16.291028008530052 11.004911069057979 25.23660604536021 2 17.472691956124315 19.170932358318097 36.03324954296161 27.323126142595978 3 19.678953830340063 23.624589555434998 27.046569397253233 29.649887216971706 4 12.834255134238804 14.159912566908128 34.160232332656875 38.84559996619619 5 15.488869145366882 35.74058382457398 31.885039409643312 16.885507620415815 6 35.94461415479488 33.78056927513061 16.1935649641705 14.081251605904017 7 31.868257359734244 29.50460044057341 19.75637135610505 18.8707708435873 8 30.45037308404726 30.268684464766572 18.731856832565544 20.549085618620627 9 28.075109972181494 13.76890539423257 17.895317446178723 40.260667187407215 10 17.24570701620354 24.849458644950797 29.030471420267613 28.874362918578058 11 39.25806142166066 20.78713918314582 20.378072567641027 19.5767268275525 12 26.399733226441185 22.920599463940462 26.510850808942855 24.1688165006755 13 30.15697525675231 18.10686287050912 24.961852636965023 26.774309235773547 14 25.22941699815781 19.090121049944667 23.31733267549044 32.36312927640708 15 26.524323033922837 25.544982392656884 22.098786161302225 25.831908412118054 16 27.508385936980694 24.57727682329172 22.442103628138373 25.47223361158921 17 24.951485032033013 24.8944892250512 24.18301250823812 25.971013234677663 18 26.798185055372258 22.74859270984298 25.750354891796544 24.702867342988217 19 26.42332365245218 24.12172556472124 24.791088259714098 24.663862523112485 20 26.81723495230786 22.211220443664804 24.689475751927787 26.28206885209955 21 28.6498055096834 22.771812494432528 23.132241994833386 25.446140001050683 22 26.88218216869231 22.860738734088162 24.137911343686543 26.119167753532977 23 24.662313797195264 22.748292296289023 25.07255099698375 27.516842909531963 24 25.382129922460432 24.364487358275284 24.480985160235875 25.77239755902841 25 26.03913963167537 23.086192166591285 24.142121590073234 26.732546611660112 26 25.30099014650605 24.448475032751702 24.87587475885952 25.374660061882732 27 26.544669206662462 23.601060768028944 24.198370930753136 25.65589909455546 28 25.286109267987396 23.14958309873953 25.274574676203454 26.289732957069624 29 24.687522841897522 23.992101271836855 25.65042303194211 25.669952854323512 30 24.90475624908639 24.173526348487062 25.745162439701797 25.176554962724744 31 25.61992437453676 24.271296927587077 23.58927447749109 26.51950422038507 32 25.333622653791902 24.099404418608636 23.600555038458683 26.966417889140775 33 24.632766942058147 23.48715512298967 24.608326614146613 27.27175132080557 34 25.983877857294598 23.961643097150873 24.65799265846321 25.396486387091322 35 27.170327662140675 23.363745180095393 24.750438588476086 24.715488569287842 36 24.964251287182087 25.018045676118945 23.949695964621338 26.068007072077627 37 26.68649332049626 24.503163013697066 24.160422298589864 24.64992136721681 38 25.269377784426965 24.062131336445 24.31703381226524 26.351457066862793 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 82.0 1 118.5 2 155.0 3 155.0 4 371.5 5 588.0 6 588.0 7 836.5 8 1085.0 9 1096.0 10 1107.0 11 1107.0 12 1382.0 13 1657.0 14 2141.0 15 2625.0 16 2625.0 17 3618.5 18 4612.0 19 4612.0 20 5232.0 21 5852.0 22 4999.5 23 4147.0 24 4147.0 25 4061.5 26 3976.0 27 3976.0 28 5480.0 29 6984.0 30 9400.0 31 11816.0 32 11816.0 33 16022.5 34 20229.0 35 20229.0 36 23462.0 37 26695.0 38 32257.0 39 37819.0 40 37819.0 41 41400.0 42 44981.0 43 54300.0 44 63619.0 45 63619.0 46 69380.0 47 75141.0 48 75141.0 49 79257.0 50 83373.0 51 84450.5 52 85528.0 53 85528.0 54 81704.0 55 77880.0 56 77880.0 57 77591.0 58 77302.0 59 70509.0 60 63716.0 61 63716.0 62 62017.5 63 60319.0 64 50262.5 65 40206.0 66 40206.0 67 33991.0 68 27776.0 69 27776.0 70 22527.0 71 17278.0 72 13648.0 73 10018.0 74 10018.0 75 7475.5 76 4933.0 77 4933.0 78 4911.5 79 4890.0 80 3906.5 81 2923.0 82 2923.0 83 3038.5 84 3154.0 85 3154.0 86 2133.5 87 1113.0 88 932.5 89 752.0 90 752.0 91 539.0 92 326.0 93 287.5 94 249.0 95 249.0 96 227.0 97 205.0 98 205.0 99 385.5 100 566.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12812943585363096 2 0.05447213984151691 3 0.01164813053214827 4 0.004111104893699389 5 3.425920744749491E-4 6 2.2839471631663273E-4 7 0.0 8 3.425920744749491E-4 9 1.1419735815831636E-4 10 4.5678943263326546E-4 11 0.0028549339539579092 12 0.003197526028432858 13 0.014274669769789547 14 0.010049367517931842 15 0.02169749805008011 16 0.011876525248464902 17 0.01987034031954705 18 0.006623446773182349 19 0.007765420354765513 20 0.006966038847657298 21 0.0062808546987074 22 0.008108012429240462 23 0.009820972801615207 24 0.01416047241163123 25 0.016558616932955874 26 0.017129603723747455 27 0.00970677544345689 28 0.0057098679079158185 29 0.010620354308723422 30 0.0033117233865911744 31 0.0052530784752825525 32 0.007080236205815615 33 0.008564801861873727 34 0.012675906755573117 35 0.01610182750032261 36 0.01381788033715628 37 0.010049367517931842 38 0.005481473191599186 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 875677.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.647389911307776 #Duplication Level Percentage of deduplicated Percentage of total 1 73.05069496828176 30.42370776636039 2 14.346033167516826 11.94949674016254 3 5.283445891124388 6.601251933088631 4 2.456045095407424 4.091514709127524 5 1.3503884990606467 2.8120078176062213 6 0.8186779518518965 2.0457479923540074 7 0.49983936185038924 1.4571903357201692 8 0.3688272735787389 1.228855461812666 9 0.2568055354283395 0.9625752238829595 >10 1.2632314075051503 9.619031984896127 >50 0.12581072063102505 3.7442014467017857 >100 0.15108242419221993 13.838238846703993 >500 0.020876844069954364 5.920835096464701 >1k 0.008240859501297776 5.30534464511833 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3994 0.4561042484843156 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2779 0.3173544583219612 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2456 0.28046871163682496 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2102 0.24004284684878102 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2052 0.23433297894086516 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1934 0.22085769067818387 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1764 0.20144413979127007 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1604 0.18317256248593944 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1585 0.18100281268093144 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1503 0.17163862931194948 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1478 0.1687836953579916 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1472 0.16809851120904168 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1472 0.16809851120904168 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1458 0.16649974819482527 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1404 0.16033309085427616 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1358 0.1550800123789936 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 1214 0.13863559280419607 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1186 0.1354380667757632 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1183 0.13509547470128827 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1176 0.13429609319418004 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1171 0.13372510640338844 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 1171 0.13372510640338844 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1168 0.13338251432891352 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1162 0.13269733017996363 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1154 0.13178375131469708 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 1113 0.12710165963020612 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 1088 0.12424672567624821 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1088 0.12424672567624821 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1084 0.12378993624361495 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCC 1001 0.11431155551647468 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGT 997 0.11385476608384142 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 968 0.11054304269725024 No Hit CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGG 955 0.10905847704119212 No Hit ACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGG 932 0.10643193780355084 No Hit CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTC 930 0.10620354308723422 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGT 915 0.10449058271485946 No Hit GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCT 911 0.1040337932822262 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 911 0.1040337932822262 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 898 0.10254922762616808 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACG 897 0.10243503026800978 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2839471631663273E-4 2 0.0 0.0 0.0 0.0 2.2839471631663273E-4 3 0.0 0.0 0.0 0.0 2.2839471631663273E-4 4 0.0 0.0 0.0 1.1419735815831636E-4 2.2839471631663273E-4 5 0.0 0.0 0.0 1.1419735815831636E-4 2.2839471631663273E-4 6 0.0 0.0 0.0 1.1419735815831636E-4 2.2839471631663273E-4 7 0.0 0.0 0.0 1.1419735815831636E-4 2.2839471631663273E-4 8 0.0 0.0 0.0 1.1419735815831636E-4 2.2839471631663273E-4 9 0.0 0.0 0.0 1.1419735815831636E-4 2.2839471631663273E-4 10 0.0 0.0 0.0 1.1419735815831636E-4 2.2839471631663273E-4 11 0.0 0.0 0.0 3.425920744749491E-4 3.425920744749491E-4 12 0.0 0.0 0.0 3.425920744749491E-4 3.425920744749491E-4 13 0.0 0.0 0.0 3.425920744749491E-4 3.425920744749491E-4 14 0.0 0.0 0.0 3.425920744749491E-4 3.425920744749491E-4 15 0.0 0.0 0.0 4.5678943263326546E-4 5.709867907915818E-4 16 0.0 0.0 0.0 4.5678943263326546E-4 5.709867907915818E-4 17 0.0 0.0 0.0 5.709867907915818E-4 6.851841489498982E-4 18 0.0 0.0 0.0 6.851841489498982E-4 6.851841489498982E-4 19 0.0 0.0 0.0 7.993815071082145E-4 6.851841489498982E-4 20 0.0 0.0 0.0 9.135788652665309E-4 0.0010277762234248472 21 0.0 0.0 0.0 0.0017129603723747455 0.0011419735815831637 22 0.0 0.0 0.0 0.0023981445213246437 0.0011419735815831637 23 0.0 0.0 0.0 0.0035401181029078074 0.0011419735815831637 24 0.0 0.0 0.0 0.005595670549757502 0.0011419735815831637 25 0.0 0.0 0.0 0.0069660388476572984 0.0011419735815831637 26 0.0 0.0 0.0 0.007651222996607196 0.0011419735815831637 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGACCGT 50 9.70238E-7 25.590727 6 ACTGAGC 100 1.4551915E-10 20.797215 8 TAGAATA 40 0.004493535 19.991613 4 TACAATA 65 9.426549E-6 19.693047 2 GTGTAGG 75 1.4956786E-6 19.21609 1 TAAGCTG 85 2.4035216E-7 18.81671 5 GTTCAAA 425 0.0 18.462515 1 GTATAGA 45 0.008806043 17.792675 1 ATCGTTT 230 0.0 17.390963 29 CTAGCGG 470 0.0 17.36136 29 TCTAGCG 470 0.0 17.360369 28 GTATAGG 65 2.0862854E-4 17.245209 1 TATGGAC 65 2.1055045E-4 17.224527 3 GTCTTAG 75 3.209117E-5 17.080969 1 GTTATTC 160 1.8189894E-12 16.993841 3 TCTGTAC 105 1.1930206E-7 16.755833 3 ACCGTCG 240 0.0 16.664436 8 TAGCGGC 495 0.0 16.485468 30 TCGTTCT 380 0.0 16.421669 30 AGGCCCG 430 0.0 16.372707 10 >>END_MODULE