##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062946_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1523152 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28020775339559 32.0 32.0 32.0 32.0 32.0 2 30.928733310923665 32.0 32.0 32.0 32.0 32.0 3 30.984565558788617 32.0 32.0 32.0 32.0 32.0 4 31.043192668886626 32.0 32.0 32.0 32.0 32.0 5 30.968081977373238 32.0 32.0 32.0 32.0 32.0 6 34.6357008361608 36.0 36.0 36.0 32.0 36.0 7 34.56810482473187 36.0 36.0 36.0 32.0 36.0 8 34.5601568326733 36.0 36.0 36.0 32.0 36.0 9 34.673798806685085 36.0 36.0 36.0 32.0 36.0 10 34.419594367469564 36.0 36.0 36.0 32.0 36.0 11 34.657153061546055 36.0 36.0 36.0 32.0 36.0 12 34.492191192999776 36.0 36.0 36.0 32.0 36.0 13 34.56431334495835 36.0 36.0 36.0 32.0 36.0 14 34.46946594955723 36.0 36.0 36.0 32.0 36.0 15 34.42507576394214 36.0 36.0 36.0 32.0 36.0 16 34.438778270323645 36.0 36.0 36.0 32.0 36.0 17 34.36623921972331 36.0 36.0 36.0 32.0 36.0 18 34.394095270859374 36.0 36.0 36.0 32.0 36.0 19 34.378285292603756 36.0 36.0 36.0 32.0 36.0 20 34.35558499742639 36.0 36.0 36.0 32.0 36.0 21 34.33961088584724 36.0 36.0 36.0 32.0 36.0 22 34.31662434215364 36.0 36.0 36.0 32.0 36.0 23 34.256548263075516 36.0 36.0 36.0 32.0 36.0 24 34.24389752303119 36.0 36.0 36.0 32.0 36.0 25 34.2218800224797 36.0 36.0 36.0 32.0 36.0 26 34.173523062701555 36.0 36.0 36.0 32.0 36.0 27 34.17132827189933 36.0 36.0 36.0 32.0 36.0 28 34.1643900280471 36.0 36.0 36.0 32.0 36.0 29 34.127347106526464 36.0 36.0 36.0 32.0 36.0 30 34.10613648539345 36.0 36.0 36.0 32.0 36.0 31 34.1236501675473 36.0 36.0 36.0 32.0 36.0 32 34.07329669002174 36.0 36.0 36.0 32.0 36.0 33 34.04513141170415 36.0 36.0 36.0 32.0 36.0 34 34.050785476433084 36.0 36.0 36.0 32.0 36.0 35 34.001138428732 36.0 36.0 36.0 32.0 36.0 36 33.97226737712323 36.0 36.0 36.0 32.0 36.0 37 33.97225424645735 36.0 36.0 36.0 32.0 36.0 38 33.377676686240115 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 3.0 8 2.0 9 5.0 10 8.0 11 21.0 12 9.0 13 7.0 14 206.0 15 414.0 16 532.0 17 638.0 18 806.0 19 976.0 20 1306.0 21 1850.0 22 2745.0 23 4171.0 24 6128.0 25 9226.0 26 13354.0 27 19291.0 28 27401.0 29 37210.0 30 50723.0 31 68131.0 32 93496.0 33 141451.0 34 323076.0 35 719965.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.65851407657769 17.000809146045274 11.293996083759433 26.046680693617606 2 16.88009427864226 19.73426981349225 37.08792508158729 26.297710826278202 3 19.067286339574274 23.574710726653596 28.347409048467647 29.01059388530448 4 12.747413349930964 15.278223685895101 35.87149704978436 36.10286591438958 5 14.914138575795455 36.218184396567125 33.31512547664317 15.552551550994254 6 34.33918808993736 35.21119732869207 16.886135236933484 13.563479344437084 7 30.54601940319771 30.43119165466851 20.622577800887765 18.400211141246007 8 28.425199176703465 32.22949883300671 19.62052201202118 19.724779978268646 9 27.72085987647958 14.337993196988608 18.419406111943086 39.521740814588725 10 16.06575889281353 26.161810470475466 31.261079086623685 26.51135155008732 11 37.65661889642603 21.141023317865123 21.966957384953556 19.23540040075529 12 25.232091223997248 23.618548389214684 28.21585862591491 22.933501760873163 13 29.577459239754944 19.149468458826078 24.998128607355557 26.274943694063417 14 24.010022232231616 19.649917860242912 24.84258188040294 31.497478027122533 15 25.439045228077617 26.58233916231556 22.39273492851622 25.5858806810906 16 26.12477388303967 25.585376183112878 23.384515379236305 24.905334554611144 17 24.32647357606792 25.60848360599221 24.967511424355628 25.097531393584237 18 25.390378530772985 24.397780014483875 26.011753868658953 24.200087586084187 19 25.755738332434913 24.887413192107662 25.422524715258294 23.934323760199128 20 25.912894237158156 23.92585229287202 24.969797802855815 25.19145566711401 21 27.215068116295054 24.06292082305521 24.224438087346698 24.497572973303033 22 26.001038710003595 24.1007640624723 24.765026332152146 25.133170895371965 23 24.422689279781483 23.857230090413065 25.430496188468886 26.289584441336565 24 24.841901917794907 24.997455591035013 24.991611658186397 25.16903083298368 25 25.124877125636203 24.196186610125306 25.063086998004465 25.615849266234026 26 24.79817606585495 25.225660631101178 25.354825322320735 24.621337980723137 27 25.626565552108467 24.630587153854993 24.62224848574383 25.120598808292705 28 24.649276755388964 24.51303849403867 25.49106506805019 25.346619682522174 29 24.58177553831749 24.86812091509705 25.619276867942318 24.93082667864314 30 24.63883060163823 24.827326755555088 25.776832634324027 24.757010008482656 31 25.195822625736835 24.842980784761224 24.356854809587528 25.604341779914407 32 24.867027650238565 24.68765203757433 24.539135333384547 25.906184978802553 33 24.439587164788062 24.362832224468477 25.186060147246046 26.011520463497412 34 25.341523551253974 24.48430846610701 25.274679816540868 24.899488166098145 35 26.075936400539497 24.301893879201998 25.204050676798172 24.418119043460333 36 24.739302385594115 25.11870187329318 24.7581476007152 25.383848140397507 37 25.873974811771138 24.874114666125635 24.67608615290874 24.575824369194486 38 24.697123692766688 24.618926059574648 25.281537742340436 25.402412505318228 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 447.0 1 349.5 2 252.0 3 252.0 4 608.5 5 965.0 6 965.0 7 1117.5 8 1270.0 9 1199.0 10 1128.0 11 1128.0 12 1456.5 13 1785.0 14 2388.5 15 2992.0 16 2992.0 17 4320.0 18 5648.0 19 5648.0 20 7034.5 21 8421.0 22 9011.0 23 9601.0 24 9601.0 25 11257.0 26 12913.0 27 12913.0 28 16806.5 29 20700.0 30 25878.0 31 31056.0 32 31056.0 33 40115.0 34 49174.0 35 49174.0 36 55579.0 37 61984.0 38 71776.5 39 81569.0 40 81569.0 41 88358.5 42 95148.0 43 107781.0 44 120414.0 45 120414.0 46 125735.0 47 131056.0 48 131056.0 49 137883.5 50 144711.0 51 146047.0 52 147383.0 53 147383.0 54 139609.5 55 131836.0 56 131836.0 57 127709.0 58 123582.0 59 110450.0 60 97318.0 61 97318.0 62 91773.0 63 86228.0 64 71331.5 65 56435.0 66 56435.0 67 47080.0 68 37725.0 69 37725.0 70 30363.0 71 23001.0 72 18168.5 73 13336.0 74 13336.0 75 10107.0 76 6878.0 77 6878.0 78 6735.5 79 6593.0 80 5115.0 81 3637.0 82 3637.0 83 3805.0 84 3973.0 85 3973.0 86 2649.5 87 1326.0 88 1141.5 89 957.0 90 957.0 91 682.5 92 408.0 93 362.5 94 317.0 95 317.0 96 282.0 97 247.0 98 247.0 99 492.5 100 738.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11784772629389582 2 0.0561992499763648 3 0.012999359223504942 4 0.0028230931647005683 5 0.0 6 1.969599882349234E-4 7 6.565332941164112E-5 8 4.595733058814879E-4 9 1.969599882349234E-4 10 7.878399529396935E-4 11 0.0018382932235259516 12 0.0028887464941122092 13 0.01457503912938433 14 0.009060159458806475 15 0.023569545258779162 16 0.010307572717627656 17 0.020286878788197106 18 0.0051866130235196485 19 0.006893599588222318 20 0.005514879670577855 21 0.006237066294105907 22 0.007156212905868883 23 0.009322772776453039 24 0.01345893252938643 25 0.016741598999968486 26 0.019039465529375927 27 0.008337972835278424 28 0.005580532999989496 29 0.010898452682332426 30 0.0028887464941122092 31 0.005908799647047701 32 0.005974452976459342 33 0.008075359517631858 34 0.012933705894093301 35 0.016150719035263716 36 0.014378079141149405 37 0.009125812788218116 38 0.0057774929882244185 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1523152.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.863841050905116 #Duplication Level Percentage of deduplicated Percentage of total 1 81.87457778459138 47.37577555037563 2 11.679754767399778 13.51670946748744 3 3.0817758574112326 5.349701651032812 4 1.1588963869813715 2.6823278532303325 5 0.5713859707294378 1.6531293494502652 6 0.35192617337419907 1.221828009466676 7 0.23573744907297822 0.9548471998033257 8 0.16389752428190185 0.7586992234947865 9 0.11471744970390149 0.5974193047888582 >10 0.6174337775541073 6.417979873842264 >50 0.0634019942154031 2.602156345249242 >100 0.07200307909329245 9.20936751026451 >500 0.010041552220583786 3.9090973683662296 >1k 0.0044502333704859965 3.7509612931477117 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3651 0.23970030568190173 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2233 0.1466038845761946 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2093 0.13741241845856486 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2046 0.13432671197621773 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1959 0.12861487231740498 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1959 0.12861487231740498 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1846 0.12119604609388951 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1844 0.12106473943506624 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1749 0.11482767314096032 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1740 0.11423679317625555 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1717 0.11272676659978781 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1702 0.11174196665861319 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.565332941164113E-5 0.0 5 0.0 0.0 0.0 6.565332941164113E-5 0.0 6 0.0 0.0 0.0 6.565332941164113E-5 0.0 7 0.0 0.0 0.0 6.565332941164113E-5 0.0 8 0.0 0.0 0.0 6.565332941164113E-5 0.0 9 0.0 0.0 0.0 1.3130665882328226E-4 0.0 10 0.0 0.0 0.0 1.3130665882328226E-4 0.0 11 0.0 0.0 0.0 1.3130665882328226E-4 0.0 12 0.0 0.0 0.0 1.3130665882328226E-4 6.565332941164113E-5 13 0.0 0.0 0.0 1.3130665882328226E-4 6.565332941164113E-5 14 0.0 0.0 0.0 1.3130665882328226E-4 6.565332941164113E-5 15 0.0 0.0 0.0 1.9695998823492336E-4 1.3130665882328226E-4 16 0.0 0.0 0.0 2.626133176465645E-4 1.3130665882328226E-4 17 0.0 0.0 0.0 2.626133176465645E-4 1.3130665882328226E-4 18 0.0 0.0 0.0 2.626133176465645E-4 1.3130665882328226E-4 19 0.0 0.0 0.0 2.626133176465645E-4 1.3130665882328226E-4 20 0.0 0.0 0.0 3.939199764698467E-4 1.3130665882328226E-4 21 0.0 0.0 0.0 6.565332941164112E-4 1.3130665882328226E-4 22 0.0 0.0 0.0 0.001050453270586258 1.3130665882328226E-4 23 0.0 0.0 0.0 0.0017726398941143103 1.3130665882328226E-4 24 0.0 0.0 0.0 0.0022322131999957984 1.3130665882328226E-4 25 0.0 0.0 0.0 0.0029543998235238506 1.3130665882328226E-4 26 0.0 0.0 0.0 0.0035452797882286205 1.3130665882328226E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGAAA 45 0.008852657 17.777393 13 ACCGTCG 385 0.0 17.037476 8 TACCGTC 390 0.0 16.818495 7 ATACCGT 410 0.0 16.77737 6 ATCGTTT 415 0.0 16.577412 29 CATCGTT 415 0.0 16.576323 28 GCATCGT 425 0.0 16.18629 27 CGTCGTA 400 0.0 15.999655 10 TAGGACG 110 2.0246989E-7 15.997029 4 TAAACGC 405 0.0 15.800573 28 CGCTTCG 420 0.0 15.618197 32 GTAAACG 420 0.0 15.617172 27 AACGCTT 410 0.0 15.608907 30 TTTTCGG 535 0.0 15.550556 29 CCGTCGT 425 0.0 15.434961 9 TTCGGAA 545 0.0 15.265224 31 GTCCTAT 495 0.0 15.21207 1 CGGCATC 465 0.0 15.13946 25 TCGTTTA 465 0.0 15.138963 30 CGTTTAT 465 0.0 15.138963 31 >>END_MODULE