##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062944_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1587278 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.206755212382458 32.0 32.0 32.0 32.0 32.0 2 30.836033133452364 32.0 32.0 32.0 32.0 32.0 3 30.900268887995676 32.0 32.0 32.0 32.0 32.0 4 30.949469469116313 32.0 32.0 32.0 32.0 32.0 5 30.87717715485252 32.0 32.0 32.0 32.0 32.0 6 34.515800634797436 36.0 36.0 36.0 32.0 36.0 7 34.436433315399064 36.0 36.0 36.0 32.0 36.0 8 34.41678206338146 36.0 36.0 36.0 32.0 36.0 9 34.53815966705265 36.0 36.0 36.0 32.0 36.0 10 34.28254848867054 36.0 36.0 36.0 32.0 36.0 11 34.53546826705845 36.0 36.0 36.0 32.0 36.0 12 34.35708174623475 36.0 36.0 36.0 32.0 36.0 13 34.44865234697387 36.0 36.0 36.0 32.0 36.0 14 34.340816164528206 36.0 36.0 36.0 32.0 36.0 15 34.29204524979241 36.0 36.0 36.0 32.0 36.0 16 34.3099091652502 36.0 36.0 36.0 32.0 36.0 17 34.227552451429425 36.0 36.0 36.0 32.0 36.0 18 34.25749490637431 36.0 36.0 36.0 32.0 36.0 19 34.248209198388686 36.0 36.0 36.0 32.0 36.0 20 34.21926719831057 36.0 36.0 36.0 32.0 36.0 21 34.20342435288588 36.0 36.0 36.0 32.0 36.0 22 34.18404400489391 36.0 36.0 36.0 32.0 36.0 23 34.13003897237913 36.0 36.0 36.0 32.0 36.0 24 34.12797758174686 36.0 36.0 36.0 32.0 36.0 25 34.10317474317668 36.0 36.0 36.0 32.0 36.0 26 34.056558460458724 36.0 36.0 36.0 32.0 36.0 27 34.0620080414395 36.0 36.0 36.0 32.0 36.0 28 34.0530562384157 36.0 36.0 36.0 32.0 36.0 29 34.01424325165472 36.0 36.0 36.0 32.0 36.0 30 33.997692275707216 36.0 36.0 36.0 32.0 36.0 31 34.00692632292516 36.0 36.0 36.0 32.0 36.0 32 33.96180190237627 36.0 36.0 36.0 32.0 36.0 33 33.920428557568364 36.0 36.0 36.0 32.0 36.0 34 33.923027976195726 36.0 36.0 36.0 32.0 36.0 35 33.87769439253867 36.0 36.0 36.0 32.0 36.0 36 33.84084073489332 36.0 36.0 36.0 32.0 36.0 37 33.84181535937624 36.0 36.0 36.0 32.0 36.0 38 33.23415368952383 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 0.0 8 3.0 9 6.0 10 22.0 11 17.0 12 6.0 13 12.0 14 176.0 15 347.0 16 503.0 17 574.0 18 788.0 19 1072.0 20 1521.0 21 2144.0 22 3177.0 23 4959.0 24 7276.0 25 10876.0 26 16254.0 27 22656.0 28 31779.0 29 42508.0 30 56897.0 31 75975.0 32 103437.0 33 153525.0 34 339642.0 35 711124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.176253708248886 17.051605451780304 11.332812301892933 25.43932853807787 2 17.026847968673273 19.343636474810214 37.25684373890948 26.372671817607035 3 19.538188277087034 23.440470242209518 27.79590661440353 29.225434866299913 4 12.638440955904914 14.947181534611579 35.68439084719344 36.72998666229007 5 15.017246538879526 36.20469042856468 32.9532689672552 15.824794065300592 6 34.54795397386207 35.11068046308383 16.77469268027156 13.566672882782536 7 31.034048268858093 30.22461122073288 20.140227660469886 18.601112849939142 8 28.832406271636952 31.80826486685025 19.30518568639421 20.054143175118583 9 27.670172043173334 14.301671542945272 18.615792086568437 39.41236432731296 10 16.24650107007562 25.828292711200547 30.65884779599703 27.266358422726807 11 37.89846658446953 21.25222319735944 21.720520072251155 19.12879014591987 12 25.57146583301517 23.664878650532938 27.73661602511035 23.02703949134154 13 29.299320113671453 19.092392708392406 25.38735877708676 26.220928400849385 14 24.043162213027422 19.724357629405045 24.8119087988437 31.420571358723837 15 25.43814155260062 26.739442916982014 22.424541850545065 25.3978736798723 16 26.256492199279563 25.72993333110705 23.35062066149706 24.662953808116328 17 24.284607924624133 25.70401789118214 24.85174176253854 25.159632421655186 18 25.35629229198957 24.355649642762636 26.247117529202736 24.04094053604506 19 25.722597071367233 24.567008808832398 25.82649353529613 23.883900584504243 20 26.038760569059587 23.79509570433095 25.071069443919402 25.095074282690057 21 27.52919814034135 23.71801939675133 24.486051615041333 24.266730847865986 22 26.07114212105766 23.88339935268067 25.180810264365117 24.86464826189656 23 24.257316883380366 23.77707503605594 25.891348904964158 26.07425917559953 24 24.64510909323475 24.857895562611333 25.413333148502527 25.083662195651392 25 24.847273096183134 24.292635774926385 25.452194509960098 25.407896618930387 26 24.64619438813479 25.386478163582044 25.74439541286196 24.222932035421206 27 25.487892011638593 24.591874410100218 24.891849081426017 25.028384496835177 28 24.44185705114029 24.482936120157536 26.035498112063955 25.03970871663822 29 24.21278335861038 25.034796629531357 25.886487062080715 24.865932949777548 30 24.347005404397358 25.204791252159424 26.035296800833656 24.41290654260956 31 25.14179182528072 25.035125057806713 24.50210624337664 25.320976873535933 32 24.737914188200264 24.8785417576304 24.619086412239135 25.7644576419302 33 24.30237767154903 24.363367841924568 25.466231418632624 25.86802306789378 34 25.251231347068803 24.769214968593324 25.39986881593464 24.579684868403227 35 26.05097985594375 24.466499770954222 25.357226347006556 24.125294026095464 36 24.47199716701386 25.398010608575326 24.910618531106767 25.21937369330405 37 25.744352810788367 25.25806226006022 24.700636437011262 24.29694849214015 38 24.54036548984523 24.805173940025895 25.471447877846625 25.183012692282247 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 128.0 1 189.5 2 251.0 3 251.0 4 587.0 5 923.0 6 923.0 7 1220.5 8 1518.0 9 1594.5 10 1671.0 11 1671.0 12 2201.0 13 2731.0 14 3472.0 15 4213.0 16 4213.0 17 5958.5 18 7704.0 19 7704.0 20 9317.0 21 10930.0 22 11089.0 23 11248.0 24 11248.0 25 12886.5 26 14525.0 27 14525.0 28 18852.0 29 23179.0 30 28696.5 31 34214.0 32 34214.0 33 43482.5 34 52751.0 35 52751.0 36 59174.0 37 65597.0 38 76215.5 39 86834.0 40 86834.0 41 92626.5 42 98419.0 43 111233.5 44 124048.0 45 124048.0 46 127935.0 47 131822.0 48 131822.0 49 138030.0 50 144238.0 51 146079.0 52 147920.0 53 147920.0 54 140307.0 55 132694.0 56 132694.0 57 128250.0 58 123806.0 59 110967.5 60 98129.0 61 98129.0 62 94189.5 63 90250.0 64 75852.0 65 61454.0 66 61454.0 67 51979.0 68 42504.0 69 42504.0 70 34838.0 71 27172.0 72 21533.5 73 15895.0 74 15895.0 75 12272.5 76 8650.0 77 8650.0 78 8357.0 79 8064.0 80 6305.0 81 4546.0 82 4546.0 83 4523.5 84 4501.0 85 4501.0 86 3056.5 87 1612.0 88 1390.0 89 1168.0 90 1168.0 91 850.0 92 532.0 93 445.5 94 359.0 95 359.0 96 336.5 97 314.0 98 314.0 99 539.0 100 764.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12354483587626112 2 0.05676384351071457 3 0.011403169451098044 4 0.0030870458735016803 5 1.8900280858173552E-4 6 3.7800561716347104E-4 7 1.260018723878237E-4 8 3.150046809695592E-4 9 1.260018723878237E-4 10 4.410065533573829E-4 11 0.002331034639174738 12 0.002772041192532121 13 0.015624232176090136 14 0.009387139492892865 15 0.025515379158534295 16 0.011403169451098044 17 0.022113328604063058 18 0.006174091747003361 19 0.0076231132794633335 20 0.006174091747003361 21 0.006615098300360744 22 0.0073711095346876854 23 0.010143150727219807 24 0.015183225622732754 25 0.018585276177203992 26 0.020097298645857877 27 0.009072134811923305 28 0.005985088938421625 29 0.012537186302588455 30 0.003276048682083416 31 0.0057960861298398895 32 0.006741100172748568 33 0.008631128258565922 34 0.01228518255781281 35 0.016317242474223167 36 0.016380243410417078 37 0.010143150727219807 38 0.0058590870660338015 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1587278.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.15090334381883 #Duplication Level Percentage of deduplicated Percentage of total 1 78.01027178619519 39.90295871960707 2 13.162331918345146 13.465303354690683 3 4.134808346403316 6.344975462162742 4 1.700052734060728 3.4783693231734096 5 0.8289873896670442 2.120172692105183 6 0.48595105941366756 1.4914101401936923 7 0.3094479611774038 1.107997992648903 8 0.2121266116417633 0.8680374246991704 9 0.15248406639337056 0.7019727967403775 >10 0.8123334932421076 7.62226602749189 >50 0.08242507110063504 2.967215466810486 >100 0.08850714308003134 9.866391530368183 >500 0.013968191332958846 4.868112892185234 >1k 0.006180615634052586 4.853759951275451 >5k 1.2361231268105173E-4 0.34105622584745365 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 5394 0.3398270498299605 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3309 0.2084700978656543 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2898 0.18257671308995652 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2711 0.170795538021695 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2127 0.13400299128445048 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2099 0.13223896507102095 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2083 0.13123095009191837 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2044 0.1287739135803558 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2017 0.1270728883031202 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1922 0.12108779936469856 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1883 0.118630762853136 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1840 0.1159217225967978 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1839 0.11585872166060389 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 1797 0.11321268234045959 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1725 0.10867661493449791 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1614 0.1016835110169737 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1609 0.10136850633600414 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 6.300093619391184E-5 3 0.0 0.0 0.0 0.0 6.300093619391184E-5 4 0.0 0.0 0.0 0.0 6.300093619391184E-5 5 0.0 0.0 0.0 0.0 6.300093619391184E-5 6 0.0 0.0 0.0 0.0 6.300093619391184E-5 7 0.0 0.0 0.0 0.0 6.300093619391184E-5 8 0.0 0.0 0.0 0.0 6.300093619391184E-5 9 0.0 0.0 0.0 0.0 6.300093619391184E-5 10 0.0 0.0 0.0 0.0 6.300093619391184E-5 11 0.0 0.0 0.0 0.0 6.300093619391184E-5 12 0.0 0.0 0.0 0.0 1.8900280858173552E-4 13 0.0 0.0 0.0 0.0 3.150046809695592E-4 14 0.0 0.0 0.0 0.0 3.150046809695592E-4 15 0.0 0.0 0.0 0.0 3.7800561716347104E-4 16 0.0 0.0 0.0 6.300093619391184E-5 3.7800561716347104E-4 17 0.0 0.0 0.0 6.300093619391184E-5 3.7800561716347104E-4 18 0.0 0.0 0.0 1.2600187238782367E-4 3.7800561716347104E-4 19 0.0 0.0 0.0 1.2600187238782367E-4 3.7800561716347104E-4 20 0.0 0.0 0.0 1.2600187238782367E-4 3.7800561716347104E-4 21 0.0 0.0 0.0 2.5200374477564734E-4 3.7800561716347104E-4 22 0.0 0.0 0.0 4.410065533573829E-4 4.410065533573829E-4 23 0.0 0.0 0.0 0.0010080149791025894 4.410065533573829E-4 24 0.0 0.0 0.0 0.0018900280858173552 5.040074895512947E-4 25 0.0 0.0 0.0 0.0022680337029808264 5.040074895512947E-4 26 0.0 0.0 0.0 0.0026460393201442976 5.670084257452066E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 580 0.0 20.690062 29 TCTAGCG 590 0.0 20.609276 28 TAGCGGC 600 0.0 19.7331 30 CTCGACG 95 3.7913196E-8 18.52668 13 CGGTCCA 705 0.0 17.702477 10 CATCGTT 455 0.0 17.230022 28 CCGGTCC 790 0.0 16.810457 9 AGCGGCG 725 0.0 16.551527 31 ATCGTTT 495 0.0 16.485174 29 GCCGGTC 760 0.0 16.419825 8 CGCCGGT 745 0.0 16.320927 7 GCGGCGC 730 0.0 16.218987 32 TCTTGCG 770 0.0 16.212198 2 GTGTACG 60 0.0024313699 16.010908 1 TCGACGC 110 2.0201333E-7 16.000315 14 GTGTAGG 235 0.0 15.670252 1 TCCTACA 195 0.0 15.593983 2 CTTGCGC 835 0.0 15.519796 3 AACCGCG 290 0.0 15.44712 7 ACCTCTA 825 0.0 15.321031 25 >>END_MODULE