##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062943_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 953098 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20875817596931 32.0 32.0 32.0 32.0 32.0 2 30.857316876123967 32.0 32.0 32.0 32.0 32.0 3 30.91741772619395 32.0 32.0 32.0 32.0 32.0 4 30.960350352219812 32.0 32.0 32.0 32.0 32.0 5 30.90617229288069 32.0 32.0 32.0 32.0 32.0 6 34.540118644672425 36.0 36.0 36.0 32.0 36.0 7 34.45406558402179 36.0 36.0 36.0 32.0 36.0 8 34.444592266482566 36.0 36.0 36.0 32.0 36.0 9 34.55079540613872 36.0 36.0 36.0 32.0 36.0 10 34.31709750728676 36.0 36.0 36.0 32.0 36.0 11 34.555179005726586 36.0 36.0 36.0 32.0 36.0 12 34.381153879244316 36.0 36.0 36.0 32.0 36.0 13 34.45995165240091 36.0 36.0 36.0 32.0 36.0 14 34.365188049917215 36.0 36.0 36.0 32.0 36.0 15 34.323465163078716 36.0 36.0 36.0 32.0 36.0 16 34.328399597942706 36.0 36.0 36.0 32.0 36.0 17 34.25434110658085 36.0 36.0 36.0 32.0 36.0 18 34.281360363782106 36.0 36.0 36.0 32.0 36.0 19 34.2684183578184 36.0 36.0 36.0 32.0 36.0 20 34.23623279033216 36.0 36.0 36.0 32.0 36.0 21 34.22141584600954 36.0 36.0 36.0 32.0 36.0 22 34.18726091125991 36.0 36.0 36.0 32.0 36.0 23 34.157235667266114 36.0 36.0 36.0 32.0 36.0 24 34.131383131640185 36.0 36.0 36.0 32.0 36.0 25 34.11396729402433 36.0 36.0 36.0 32.0 36.0 26 34.057988790239826 36.0 36.0 36.0 32.0 36.0 27 34.062928471154066 36.0 36.0 36.0 32.0 36.0 28 34.04925936262588 36.0 36.0 36.0 32.0 36.0 29 34.02650409506683 36.0 36.0 36.0 32.0 36.0 30 33.986811429674596 36.0 36.0 36.0 32.0 36.0 31 34.01327040870928 36.0 36.0 36.0 32.0 36.0 32 33.95525328979811 36.0 36.0 36.0 32.0 36.0 33 33.90896319161303 36.0 36.0 36.0 32.0 36.0 34 33.927625490768 36.0 36.0 36.0 32.0 36.0 35 33.87405597325773 36.0 36.0 36.0 32.0 36.0 36 33.83600322317327 36.0 36.0 36.0 32.0 36.0 37 33.830279782351866 36.0 36.0 36.0 32.0 36.0 38 33.214615915677086 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 1.0 9 3.0 10 9.0 11 11.0 12 5.0 13 8.0 14 172.0 15 293.0 16 363.0 17 419.0 18 541.0 19 709.0 20 1001.0 21 1374.0 22 2059.0 23 2901.0 24 4548.0 25 6557.0 26 9526.0 27 13403.0 28 18731.0 29 25205.0 30 33833.0 31 45154.0 32 60583.0 33 89432.0 34 200406.0 35 435848.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.231307809881976 16.783919070104577 11.037308219573816 25.94746490043963 2 17.38139078840457 19.745491726696493 36.227012477665966 26.646105007232972 3 19.160322565412887 24.080651846566315 27.850910559977333 28.90811502804346 4 12.952435513249897 15.185653849059456 35.11065363920996 36.75125699848069 5 15.272680344226277 35.79311169727225 32.68103670781686 16.253171250684613 6 34.46732074489795 34.805061814274936 16.781188063754264 13.946429377072848 7 30.82967333894311 29.999328505568158 20.645830754025294 18.525167401463438 8 28.898903047440182 31.12302551162266 19.53488372093023 20.443187720006925 9 28.154305871194236 14.069546130811862 18.194008146101016 39.58213985189289 10 16.557968049321474 25.427502428931458 30.393854121419295 27.620675400327777 11 37.90432242549387 20.887841053599082 21.76332212751134 19.4445143933957 12 25.99315894950004 23.27677925021247 27.433766669814393 23.2962951304731 13 29.868966031067444 18.663552157018298 24.87001014734107 26.597471664573185 14 24.796643889663045 19.300047848496547 24.16873730335947 31.734570958480933 15 25.936999544539617 25.766464263151157 22.24986934373826 26.046666848570965 16 26.829670110578753 24.86038619664927 22.84577108163184 25.46417261114014 17 24.679300169164964 24.97397462105789 24.506462269496996 25.84026294028015 18 26.09591182760046 23.54607666818461 25.517028630427617 24.840982873787304 19 26.36133458269894 24.1632625650959 24.945200347947623 24.53020250425753 20 26.429243714055772 23.116157890705416 24.42638758749642 26.02821080774239 21 28.066738577508417 23.341398819766805 23.583783125855167 25.00807947686961 22 26.786117135748995 23.29703860629927 24.191553055461995 25.725291202489743 23 24.8649783052377 23.1645496566089 24.903698340494966 27.066773697658437 24 25.368824117671135 24.452836999625376 24.4658490746211 25.71248980808239 25 25.69763049090184 23.42319558419208 24.577937750540432 26.30123617436565 26 25.393968713369592 24.518459363794438 25.00726705291359 25.080304869922376 27 26.14474139830642 23.980021196000042 24.07928563184017 25.79595177385337 28 25.143908821720945 23.589504676643223 25.23635043450706 26.03023606712877 29 24.945409749540666 24.184136771006358 25.172480008058685 25.697973471394285 30 25.05833815987174 24.29994208153912 25.235556059194348 25.406163699394796 31 25.734210114886086 24.3374035052375 23.65883166444743 26.269554715428985 32 25.253297909400352 24.225101466063954 23.75229269234482 26.769307932190873 33 24.8306950370089 23.66596923025265 24.67739193757909 26.825943795159358 34 25.90605829749815 23.833493883358834 24.716309154289622 25.544138664853396 35 26.915371982349267 23.572226857025925 24.589714933337532 24.922686227287276 36 25.20215831414762 24.621235175231856 24.106316489780326 26.070290020840197 37 26.445540398740818 24.490766002098635 24.06232948583421 25.001364113326336 38 25.150492267367863 24.220624759322547 24.75355153356788 25.87533143974171 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 421.0 1 343.0 2 265.0 3 265.0 4 567.0 5 869.0 6 869.0 7 981.0 8 1093.0 9 1062.0 10 1031.0 11 1031.0 12 1312.0 13 1593.0 14 1939.0 15 2285.0 16 2285.0 17 3125.5 18 3966.0 19 3966.0 20 4748.0 21 5530.0 22 5334.5 23 5139.0 24 5139.0 25 5768.0 26 6397.0 27 6397.0 28 8239.0 29 10081.0 30 12786.0 31 15491.0 32 15491.0 33 20959.0 34 26427.0 35 26427.0 36 29644.5 37 32862.0 38 38895.0 39 44928.0 40 44928.0 41 48223.5 42 51519.0 43 60716.5 44 69914.0 45 69914.0 46 73938.5 47 77963.0 48 77963.0 49 84059.5 50 90156.0 51 91302.0 52 92448.0 53 92448.0 54 88928.0 55 85408.0 56 85408.0 57 84640.0 58 83872.0 59 75592.5 60 67313.0 61 67313.0 62 65060.5 63 62808.0 64 52165.0 65 41522.0 66 41522.0 67 34411.5 68 27301.0 69 27301.0 70 22032.0 71 16763.0 72 13186.5 73 9610.0 74 9610.0 75 7212.5 76 4815.0 77 4815.0 78 4837.0 79 4859.0 80 3758.5 81 2658.0 82 2658.0 83 2823.5 84 2989.0 85 2989.0 86 2017.0 87 1045.0 88 868.5 89 692.0 90 692.0 91 489.0 92 286.0 93 241.0 94 196.0 95 196.0 96 174.0 97 152.0 98 152.0 99 291.5 100 431.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12202312878633677 2 0.05413923856728269 3 0.011856073562215009 4 0.003567314169162038 5 4.1968401990141626E-4 6 1.0492100497535407E-4 7 0.0 8 3.1476301492606214E-4 9 4.1968401990141626E-4 10 4.1968401990141626E-4 11 0.0023082621094577893 12 0.0029377881393099136 13 0.014584019691574215 14 0.009442890447781864 15 0.022662937074676474 16 0.011751152557239655 17 0.01909562290551444 18 0.005875576278619827 19 0.008498601403003679 20 0.0061903392935458885 21 0.006924786328373368 22 0.0070297073333487215 23 0.010806863512461467 24 0.014374177681623506 25 0.01657751878610594 26 0.01752180783088413 27 0.009233048437831157 28 0.00671494431842266 29 0.009337969442806512 30 0.003567314169162038 31 0.0070297073333487215 32 0.0073444703482747845 33 0.00881336441792974 34 0.013010204616943903 35 0.017102123810982712 36 0.013849572656746736 37 0.010282258487584697 38 0.0061903392935458885 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 953098.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.58953163077852 #Duplication Level Percentage of deduplicated Percentage of total 1 80.62009542805818 42.39773058590248 2 11.821069997214861 12.433290690563558 3 3.3869010439914686 5.343466187499184 4 1.360380515851754 2.861670966731224 5 0.7014685044678043 1.8444950051852247 6 0.435695866031146 1.3747824916826636 7 0.2832042317700991 1.0425504533250771 8 0.20577378123614892 0.8657237421682683 9 0.14208315859096557 0.6724878086628454 >10 0.8189376781231706 7.980231572072741 >50 0.09697076776309846 3.5463309233755687 >100 0.11139147637783053 12.488235828756657 >500 0.012221007274131794 4.403423024477178 >1k 0.0038065432493197392 2.745580719597329 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3004 0.31518269894596357 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1739 0.18245762765214069 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1519 0.15937500655756281 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1499 0.15727658645805573 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1457 0.15286990424909086 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1428 0.14982719510480558 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1404 0.14730909098539707 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1320 0.13849572656746734 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1300 0.13639730646796028 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1268 0.13303983430874894 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1257 0.13188570325402005 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1219 0.1278987050649566 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1176 0.12338710185101638 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1112 0.11667215753259372 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1107 0.11614755250771694 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCT 1091 0.11446881642811128 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1089 0.11425897441816057 No Hit GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGT 1049 0.1100621342191464 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTA 1021 0.1071243460798365 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAAT 1000 0.10492100497535406 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 993 0.10418655794052659 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 984 0.1032422688957484 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTT 956 0.10030448075643847 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.196840199014162E-4 2 0.0 0.0 0.0 0.0 4.196840199014162E-4 3 0.0 0.0 0.0 0.0 4.196840199014162E-4 4 0.0 0.0 0.0 0.0 4.196840199014162E-4 5 0.0 0.0 0.0 0.0 4.196840199014162E-4 6 0.0 0.0 0.0 0.0 5.246050248767703E-4 7 0.0 0.0 0.0 0.0 5.246050248767703E-4 8 0.0 0.0 0.0 0.0 5.246050248767703E-4 9 0.0 0.0 0.0 0.0 5.246050248767703E-4 10 0.0 0.0 0.0 0.0 6.295260298521243E-4 11 0.0 0.0 0.0 0.0 6.295260298521243E-4 12 0.0 0.0 0.0 0.0 0.0010492100497535406 13 0.0 0.0 0.0 0.0 0.001573815074630311 14 0.0 0.0 0.0 0.0 0.001573815074630311 15 0.0 0.0 0.0 0.0 0.001888578089556373 16 0.0 0.0 0.0 1.0492100497535405E-4 0.001888578089556373 17 0.0 0.0 0.0 1.0492100497535405E-4 0.001888578089556373 18 0.0 0.0 0.0 1.0492100497535405E-4 0.001993499094531727 19 0.0 0.0 0.0 1.0492100497535405E-4 0.001993499094531727 20 0.0 0.0 0.0 1.0492100497535405E-4 0.002203341104482435 21 0.0 0.0 0.0 3.1476301492606214E-4 0.002203341104482435 22 0.0 0.0 0.0 4.196840199014162E-4 0.0024131831144331433 23 0.0 0.0 0.0 0.0010492100497535406 0.0024131831144331433 24 0.0 0.0 0.0 0.003147630149260622 0.0024131831144331433 25 0.0 0.0 0.0 0.003567314169162038 0.0024131831144331433 26 0.0 0.0 0.0 0.004196840199014162 0.0026230251243838515 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAACCG 40 0.0044847145 19.998623 24 TATACCT 50 7.203121E-4 19.196665 5 GACCTAT 45 0.00877804 17.80271 1 CTATTAT 65 2.0775596E-4 17.254932 1 CCTATTC 275 0.0 16.874222 3 GTCCTAT 310 0.0 16.53929 1 CATCGTT 310 0.0 16.515858 28 ATCGTTT 305 0.0 16.262882 29 GTGCTAA 100 1.2947239E-6 16.022438 1 CAACCGG 60 0.0024426165 15.9988985 13 CTATTCC 300 0.0 15.9988985 4 TAGGACA 70 3.6975084E-4 15.9988985 4 TCTAGCG 285 0.0 15.719041 28 AAACGCT 310 0.0 15.484429 29 CTAGCGG 290 0.0 15.448833 29 CATGCAC 370 0.0 15.136476 3 ATAATAG 85 9.422378E-5 15.060157 3 GGACCGT 75 6.251201E-4 14.930739 6 ACCGTCG 215 0.0 14.882696 8 ACTAAGG 65 0.0041584363 14.770538 3 >>END_MODULE