##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062942_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1506624 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19857641986322 32.0 32.0 32.0 32.0 32.0 2 31.27928335138694 32.0 32.0 32.0 32.0 32.0 3 31.364687539824136 32.0 32.0 32.0 32.0 32.0 4 31.46271133341829 32.0 32.0 32.0 32.0 32.0 5 31.385595875281425 32.0 32.0 32.0 32.0 32.0 6 34.9017976615267 36.0 36.0 36.0 36.0 36.0 7 34.917182389235805 36.0 36.0 36.0 36.0 36.0 8 34.86373043307421 36.0 36.0 36.0 32.0 36.0 9 34.970449163162144 36.0 36.0 36.0 36.0 36.0 10 34.81748664563952 36.0 36.0 36.0 32.0 36.0 11 34.9958788655962 36.0 36.0 36.0 36.0 36.0 12 34.88743110424366 36.0 36.0 36.0 32.0 36.0 13 34.93619575952594 36.0 36.0 36.0 36.0 36.0 14 34.87833859011937 36.0 36.0 36.0 32.0 36.0 15 34.85926946603798 36.0 36.0 36.0 32.0 36.0 16 34.8699237500531 36.0 36.0 36.0 32.0 36.0 17 34.83656838069751 36.0 36.0 36.0 32.0 36.0 18 34.82881528503462 36.0 36.0 36.0 32.0 36.0 19 34.822572187884965 36.0 36.0 36.0 32.0 36.0 20 34.810524722824006 36.0 36.0 36.0 32.0 36.0 21 34.79921732296844 36.0 36.0 36.0 32.0 36.0 22 34.78103362219107 36.0 36.0 36.0 32.0 36.0 23 34.72997045049063 36.0 36.0 36.0 32.0 36.0 24 34.704425921796016 36.0 36.0 36.0 32.0 36.0 25 34.68404724735568 36.0 36.0 36.0 32.0 36.0 26 34.611776395437744 36.0 36.0 36.0 32.0 36.0 27 34.60244958264305 36.0 36.0 36.0 32.0 36.0 28 34.563852029438 36.0 36.0 36.0 32.0 36.0 29 34.53153208763434 36.0 36.0 36.0 32.0 36.0 30 34.51650511341914 36.0 36.0 36.0 32.0 36.0 31 34.511195228537446 36.0 36.0 36.0 32.0 36.0 32 34.47770180217493 36.0 36.0 36.0 32.0 36.0 33 34.44767506690455 36.0 36.0 36.0 32.0 36.0 34 34.434663194001956 36.0 36.0 36.0 32.0 36.0 35 34.391889416337456 36.0 36.0 36.0 32.0 36.0 36 34.38141898708636 36.0 36.0 36.0 32.0 36.0 37 34.368117725457715 36.0 36.0 36.0 32.0 36.0 38 33.92757848009855 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 13.0 21 35.0 22 126.0 23 354.0 24 1073.0 25 2511.0 26 5489.0 27 10674.0 28 18546.0 29 28625.0 30 43243.0 31 62211.0 32 88695.0 33 140244.0 34 341172.0 35 763612.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.89162192732313 18.619067722355865 12.077963284531604 26.411347065789403 2 15.853988785523129 20.90753897455503 36.55703081857185 26.681441421349984 3 18.01265611061552 24.599236438554012 28.705171296886284 28.682936153944183 4 12.12653206975605 16.221520726499413 36.186780758544614 35.46516644519993 5 14.342084477725667 36.73655369429093 33.02082406867814 15.900537759305253 6 34.05058863431661 36.09018314468849 16.52112041300312 13.338107807991781 7 30.10085522844257 30.65142720602145 20.73124188993207 18.516475675603917 8 28.057573535024343 32.75432349105101 19.361606802093462 19.82649617183118 9 27.560407203927873 14.175672240265452 18.521977449393223 39.74194310641346 10 15.98546667144562 26.4997617160691 30.91996182147157 26.594809791013706 11 37.632165337684135 21.236395159507772 22.167534770046085 18.963904732762003 12 25.271635601421465 23.775300110048097 28.104544362391433 22.848519926139012 13 29.3316633712128 19.180868977665916 25.247889150622488 26.2395785004988 14 23.769434178667005 19.99702646446625 24.916900301601462 31.316639055265284 15 25.26058260056922 27.01038878977104 22.25093984962406 25.478088760035682 16 26.018104052504142 25.843408839896355 23.36594930121915 24.772537806380356 17 24.089288369228154 25.915158659360266 24.921413703750904 25.074139267660676 18 25.24133426787307 24.554434284864705 26.144014697761353 24.06021674950087 19 25.759446285204536 24.74539101992269 25.457778450363193 24.03738424450958 20 26.003501869079475 24.02629985981904 24.856035746145025 25.114162524956456 21 27.355585777710516 24.07214554954431 24.271266629099156 24.301002043646015 22 25.880794332756103 24.15700543533452 24.965502318761892 24.996697913147482 23 24.235308173262005 23.8082595478621 25.683450372356663 26.272981906519227 24 24.91238689945202 24.960839598997495 25.18305828129646 24.943715220254028 25 24.96877119808419 24.33304438671412 25.338671544687386 25.3595128705143 26 24.736961577672997 25.43580880166518 25.674620874219446 24.15260874644238 27 25.51580587844471 24.41865018654302 24.83939246911802 25.226151465894254 28 24.386973790408224 24.65631770103224 25.905136251646066 25.051572256913467 29 24.527884860456226 24.665941867380315 25.676213839683953 25.129959432479502 30 24.4733257932968 24.880394843039802 25.95757136485281 24.688707998810585 31 25.307442334650187 24.62505575379126 24.622467184911432 25.445034726647126 32 24.7905250414171 24.770015611061552 24.61967949534854 25.819779852172804 33 24.39613334182915 24.217787583365194 25.483664139161462 25.902414935644195 34 25.37102820610849 24.383522365235123 25.53742672358863 24.70802270506775 35 26.07697740112994 24.30228112654518 25.444503738158957 24.176237734165923 36 24.58649271483794 25.070024106877366 25.04254545261459 25.30093772567011 37 25.67428900641434 24.91855964062699 24.7848832887303 24.62226806422837 38 24.75632557889476 24.465343307971946 25.5066801803506 25.2716509327827 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 268.0 1 216.5 2 165.0 3 165.0 4 587.5 5 1010.0 6 1010.0 7 1153.5 8 1297.0 9 1264.0 10 1231.0 11 1231.0 12 1589.5 13 1948.0 14 2634.0 15 3320.0 16 3320.0 17 5067.5 18 6815.0 19 6815.0 20 8271.5 21 9728.0 22 10420.5 23 11113.0 24 11113.0 25 13215.5 26 15318.0 27 15318.0 28 19464.0 29 23610.0 30 28779.5 31 33949.0 32 33949.0 33 43818.5 34 53688.0 35 53688.0 36 58885.0 37 64082.0 38 73222.0 39 82362.0 40 82362.0 41 87304.0 42 92246.0 43 104196.5 44 116147.0 45 116147.0 46 118362.5 47 120578.0 48 120578.0 49 130268.0 50 139958.0 51 140873.5 52 141789.0 53 141789.0 54 134852.5 55 127916.0 56 127916.0 57 124970.0 58 122024.0 59 108893.0 60 95762.0 61 95762.0 62 91590.0 63 87418.0 64 71640.5 65 55863.0 66 55863.0 67 46990.0 68 38117.0 69 38117.0 70 30809.5 71 23502.0 72 18339.5 73 13177.0 74 13177.0 75 9801.0 76 6425.0 77 6425.0 78 6655.5 79 6886.0 80 5303.0 81 3720.0 82 3720.0 83 3600.0 84 3480.0 85 3480.0 86 2209.5 87 939.0 88 755.5 89 572.0 90 572.0 91 340.5 92 109.0 93 82.5 94 56.0 95 56.0 96 37.5 97 19.0 98 19.0 99 18.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007964827322543647 2 0.0 3 0.0 4 1.3274712204239413E-4 5 1.3274712204239413E-4 6 6.637356102119706E-5 7 5.973620491907736E-4 8 0.0019248332696147148 9 0.0037832929782082325 10 0.0011947240983815471 11 0.005509005564759356 12 6.637356102119705E-4 13 1.9912068306359118E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.9912068306359118E-4 22 6.637356102119706E-5 23 2.6549424408478826E-4 24 0.0 25 1.3274712204239413E-4 26 0.0 27 6.637356102119706E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 1.9912068306359118E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 1506624.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.83140828777514 #Duplication Level Percentage of deduplicated Percentage of total 1 80.33404878544897 42.44160930794101 2 12.34170164691407 13.04058957348048 3 3.3486842950074607 5.3074712164919875 4 1.3251109332165418 2.8002990695743137 5 0.6792804759240804 1.794367208272965 6 0.41605467693198206 1.3188452704219156 7 0.27161334548113064 1.0044800886065497 8 0.19761233372210862 0.8352110308458236 9 0.14837114261925397 0.7054790772457368 >10 0.7473401341818369 7.14031621586886 >50 0.0785194817650503 2.9267093751157294 >100 0.09178634258996818 10.624812408503725 >500 0.013672941842967341 4.976597529178281 >1k 0.0062034643546796265 5.083212628452659 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4595 0.3049865128924005 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2947 0.19560288432946774 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 2439 0.16188511533069963 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 2351 0.15604424196083427 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2215 0.1470174376619515 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2160 0.14336689180578566 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2152 0.1428359033176161 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2098 0.13925173102247143 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1971 0.1308222887727794 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 1970 0.1307559152117582 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1882 0.12491504184189287 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 1860 0.12345482349942653 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 1858 0.12332207637738414 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1769 0.11741482944649759 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1766 0.11721570876343401 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 1689 0.11210494456480183 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 1656 0.10991461705110234 No Hit GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCG 1569 0.10414011724225818 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.6549424408478826E-4 2 0.0 0.0 0.0 0.0 2.6549424408478826E-4 3 0.0 0.0 0.0 0.0 2.6549424408478826E-4 4 0.0 0.0 0.0 6.637356102119706E-5 2.6549424408478826E-4 5 0.0 0.0 0.0 6.637356102119706E-5 2.6549424408478826E-4 6 0.0 0.0 0.0 6.637356102119706E-5 2.6549424408478826E-4 7 0.0 0.0 0.0 6.637356102119706E-5 2.6549424408478826E-4 8 0.0 0.0 0.0 6.637356102119706E-5 2.6549424408478826E-4 9 0.0 0.0 0.0 6.637356102119706E-5 2.6549424408478826E-4 10 0.0 0.0 0.0 6.637356102119706E-5 3.318678051059853E-4 11 0.0 0.0 0.0 6.637356102119706E-5 3.318678051059853E-4 12 0.0 0.0 0.0 6.637356102119706E-5 5.973620491907736E-4 13 0.0 0.0 0.0 6.637356102119706E-5 6.637356102119706E-4 14 0.0 0.0 0.0 6.637356102119706E-5 6.637356102119706E-4 15 0.0 0.0 0.0 6.637356102119706E-5 7.301091712331677E-4 16 0.0 0.0 0.0 1.3274712204239413E-4 7.301091712331677E-4 17 0.0 0.0 0.0 1.9912068306359118E-4 7.301091712331677E-4 18 0.0 0.0 0.0 1.9912068306359118E-4 7.301091712331677E-4 19 0.0 0.0 0.0 2.6549424408478826E-4 7.964827322543647E-4 20 0.0 0.0 0.0 5.309884881695765E-4 8.628562932755618E-4 21 0.0 0.0 0.0 5.973620491907736E-4 9.956034153179559E-4 22 0.0 0.0 0.0 7.301091712331677E-4 9.956034153179559E-4 23 0.0 0.0 0.0 0.0015929654645087294 9.956034153179559E-4 24 0.0 0.0 0.0 0.002986810245953868 9.956034153179559E-4 25 0.0 0.0 0.0 0.003451425173102247 9.956034153179559E-4 26 0.0 0.0 0.0 0.004115160783314218 0.001261097659402744 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTT 390 0.0 18.050964 29 CATCGTT 400 0.0 17.59969 28 GATATAC 215 0.0 17.117682 1 GTACTAA 75 3.2324955E-5 17.068066 1 ACGAACG 190 0.0 16.841808 15 CTAGCGG 490 0.0 16.65277 29 CGTAAAC 125 2.8558134E-9 16.639708 32 CGGCATC 425 0.0 16.564964 25 TCTAGCG 485 0.0 16.164663 28 ATAATAC 160 1.8189894E-11 16.00025 3 ACTATAC 130 4.803951E-9 16.000248 3 TCGTTTA 440 0.0 15.999719 30 CGTTTAT 440 0.0 15.999719 31 CGAACGA 200 0.0 15.999718 16 GCATCGT 445 0.0 15.819945 27 GGCATCG 440 0.0 15.636088 26 ACCGTCG 485 0.0 15.505396 8 CTATACT 155 1.891749E-10 15.484112 4 ATACCGT 490 0.0 15.3471775 6 CGTCGTA 490 0.0 15.346669 10 >>END_MODULE