##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062941_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2003689 Sequences flagged as poor quality 0 Sequence length 38 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24486434771065 32.0 32.0 32.0 32.0 32.0 2 30.85754525777204 32.0 32.0 32.0 32.0 32.0 3 30.898113928858223 32.0 32.0 32.0 32.0 32.0 4 30.968286495558942 32.0 32.0 32.0 32.0 32.0 5 30.874998565146587 32.0 32.0 32.0 32.0 32.0 6 34.52803304305209 36.0 36.0 36.0 32.0 36.0 7 34.456402166204434 36.0 36.0 36.0 32.0 36.0 8 34.4455581679592 36.0 36.0 36.0 32.0 36.0 9 34.57917620948161 36.0 36.0 36.0 32.0 36.0 10 34.296887890286364 36.0 36.0 36.0 32.0 36.0 11 34.557801634884456 36.0 36.0 36.0 32.0 36.0 12 34.37348959843568 36.0 36.0 36.0 32.0 36.0 13 34.458617080794475 36.0 36.0 36.0 32.0 36.0 14 34.360097300529176 36.0 36.0 36.0 32.0 36.0 15 34.2997031974523 36.0 36.0 36.0 32.0 36.0 16 34.315979176409115 36.0 36.0 36.0 32.0 36.0 17 34.23350330315733 36.0 36.0 36.0 32.0 36.0 18 34.25704937243255 36.0 36.0 36.0 32.0 36.0 19 34.251870924080535 36.0 36.0 36.0 32.0 36.0 20 34.22844213847558 36.0 36.0 36.0 32.0 36.0 21 34.21453628781712 36.0 36.0 36.0 32.0 36.0 22 34.19476176193012 36.0 36.0 36.0 32.0 36.0 23 34.141946180270494 36.0 36.0 36.0 32.0 36.0 24 34.1242593037143 36.0 36.0 36.0 32.0 36.0 25 34.10714686760271 36.0 36.0 36.0 32.0 36.0 26 34.049436314717504 36.0 36.0 36.0 32.0 36.0 27 34.04835630679212 36.0 36.0 36.0 32.0 36.0 28 34.037326151912794 36.0 36.0 36.0 32.0 36.0 29 34.00843045003491 36.0 36.0 36.0 32.0 36.0 30 33.98747909480962 36.0 36.0 36.0 32.0 36.0 31 34.00476171701297 36.0 36.0 36.0 32.0 36.0 32 33.96082026701749 36.0 36.0 36.0 32.0 36.0 33 33.919515952825016 36.0 36.0 36.0 32.0 36.0 34 33.92748974516504 36.0 36.0 36.0 32.0 36.0 35 33.88843528112397 36.0 36.0 36.0 32.0 36.0 36 33.846030496748746 36.0 36.0 36.0 32.0 36.0 37 33.853334524469616 36.0 36.0 36.0 32.0 36.0 38 33.261105391106106 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 3.0 8 4.0 9 15.0 10 17.0 11 20.0 12 10.0 13 10.0 14 201.0 15 480.0 16 672.0 17 720.0 18 879.0 19 1239.0 20 1808.0 21 2478.0 22 3886.0 23 5943.0 24 8973.0 25 13647.0 26 19854.0 27 28506.0 28 39465.0 29 53655.0 30 71721.0 31 96776.0 32 130611.0 33 195855.0 34 432412.0 35 893828.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.891547548319814 17.001790335386833 11.499569530020722 25.60709258627263 2 17.220156846491676 18.975579186006154 37.05691864805415 26.74734531944802 3 19.60266963359174 22.79995068435441 27.672915478074756 29.924464203979095 4 12.867160439604316 14.7523482496681 35.29930825206377 37.08118305866382 5 15.394800474925423 35.77292416015907 32.806586670646006 16.0256886942695 6 35.335626440470215 34.58850338825544 16.39448496421096 13.681385207063382 7 31.670898862497555 29.747046446352925 19.774036676368777 18.808018014780746 8 28.940456149999775 31.943426180688263 18.907531780226712 20.20858588908525 9 27.525647756831916 14.494101864365838 18.36891445956548 39.611335919236765 10 16.532530144534057 25.529226223748303 30.287071787910246 27.651171843807393 11 38.19341437267049 21.0681980160069 21.554414075211266 19.18397353611135 12 25.888076085942057 23.123941607952368 27.363798387825288 23.62418391828028 13 29.456215898376097 18.872239861794053 25.008198615644407 26.663345624185443 14 24.118785076396918 19.568960870164172 24.299071018286146 32.013183035152764 15 25.595873390195855 26.577805245023693 21.930626789017936 25.895694575762505 16 26.58134338005799 25.47594411409581 22.945145821759485 24.997566684086713 17 24.637800530838184 25.57298226329554 24.340283549657133 25.448933656209142 18 25.673401345604823 24.264858551777834 25.56329733075126 24.498442771866078 19 25.987739541625366 24.567435016675702 25.024382160543922 24.42044328115501 20 26.389403251615377 23.635851819612906 24.44621019206831 25.528534736703406 21 27.625141061481095 23.593116049989042 24.069119002734634 24.712623885795225 22 26.486447096333997 23.650636704718046 24.644288374604884 25.21862782434307 23 24.69176102757305 23.5444561906844 25.409562770342376 26.354220011400177 24 25.155025739039633 24.61948000800648 24.86182081555294 25.363673437400948 25 25.31441227429579 24.06325233697109 24.8427002692003 25.779635119532816 26 24.965057585099757 25.19452941552322 25.305047282079133 24.535365717297893 27 25.89084102820065 24.1161467431994 24.44077863738458 25.552233591215373 28 24.836827701932112 24.268688138146306 25.432168887633345 25.462315272288233 29 24.742972484903785 24.62123443085588 25.370030776418258 25.265762307822083 30 24.669011423828582 24.738585529484396 25.582857818776922 25.009545227910095 31 25.565714068958773 24.66736941086279 24.122742658868603 25.644173861309838 32 25.265954526442723 24.39095240519521 24.004585887564897 26.338507180797173 33 24.67307147106857 24.049611279483464 25.011729496839525 26.26558775260844 34 25.754161891489336 24.275537382151285 24.959968374017176 25.010332352342203 35 26.28957012831559 23.989663272671365 25.13584799799535 24.584918601017698 36 24.6738635076039 24.967367632385084 24.596194729005347 25.762574131005668 37 26.09796989557737 24.661628465884334 24.35496405527746 24.885437583260835 38 24.89194277409102 24.32520383635594 25.06119083554938 25.721662554003654 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 126.0 1 187.0 2 248.0 3 248.0 4 518.5 5 789.0 6 789.0 7 1018.5 8 1248.0 9 1264.0 10 1280.0 11 1280.0 12 1669.5 13 2059.0 14 2809.0 15 3559.0 16 3559.0 17 5270.0 18 6981.0 19 6981.0 20 8719.0 21 10457.0 22 11014.5 23 11572.0 24 11572.0 25 13735.5 26 15899.0 27 15899.0 28 20603.0 29 25307.0 30 31596.0 31 37885.0 32 37885.0 33 49509.0 34 61133.0 35 61133.0 36 69496.0 37 77859.0 38 90097.5 39 102336.0 40 102336.0 41 109788.0 42 117240.0 43 135289.0 44 153338.0 45 153338.0 46 157378.5 47 161419.0 48 161419.0 49 174143.0 50 186867.0 51 190819.0 52 194771.0 53 194771.0 54 187171.0 55 179571.0 56 179571.0 57 174455.0 58 169339.0 59 151786.5 60 134234.0 61 134234.0 62 127359.5 63 120485.0 64 101409.0 65 82333.0 66 82333.0 67 69105.5 68 55878.0 69 55878.0 70 44913.5 71 33949.0 72 26655.0 73 19361.0 74 19361.0 75 14662.5 76 9964.0 77 9964.0 78 9658.0 79 9352.0 80 7368.5 81 5385.0 82 5385.0 83 5498.5 84 5612.0 85 5612.0 86 3808.0 87 2004.0 88 1683.0 89 1362.0 90 1362.0 91 1000.0 92 638.0 93 551.0 94 464.0 95 464.0 96 429.5 97 395.0 98 395.0 99 692.5 100 990.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.11918017217242796 2 0.05459929160663157 3 0.01337532920528086 4 0.003443648190911863 5 2.994476687749446E-4 6 1.497238343874723E-4 7 4.9907944795824104E-5 8 2.994476687749446E-4 9 2.4953972397912053E-4 10 4.491715031624169E-4 11 0.0026451210741786774 12 0.002994476687749446 13 0.015072199328338878 14 0.010231128683143942 15 0.024704432673932932 16 0.012476986198956026 17 0.022059311599754255 18 0.006438124878661309 19 0.008733890339269218 20 0.006537940768252958 21 0.0064880328234571336 22 0.008484350615290098 23 0.010530576351918886 24 0.01557127877629712 25 0.017367964788946786 26 0.019613822304758874 27 0.009432601566410756 28 0.006587848713048781 29 0.010330944572735588 30 0.0034935561357076874 31 0.005739413651519772 32 0.007536099664169439 33 0.009632233345594052 34 0.01362486892925998 35 0.017318056844150966 36 0.015471462886705473 37 0.009781957179981524 38 0.0060388613202947165 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2003689.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.53241241869318 #Duplication Level Percentage of deduplicated Percentage of total 1 79.27915939297452 41.647254974390506 2 12.574812472389127 13.21170469774545 3 3.800167520550236 5.988959023490031 4 1.5308118131949444 3.216689500246573 5 0.7698116178443085 2.0220030696649323 6 0.44494905844597094 1.4024548466155777 7 0.2981893969672463 1.096522586625536 8 0.19693843319950022 0.8276520795141922 9 0.16272457842849813 0.7693483198197463 >10 0.7779868929826322 7.309270550380143 >50 0.06890498323564666 2.5502952706610746 >100 0.07414365959448865 8.525352077227518 >500 0.013948331732923059 5.006367455782515 >1k 0.007451848460054785 6.426125547836204 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4927 0.24589644400902533 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 3324 0.1658940085013193 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 3220 0.1607035822425536 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2846 0.1420380108889154 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 2679 0.13370338410801277 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 2641 0.13180688220577147 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 2623 0.13090853919944662 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 2611 0.13030964386189672 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 2584 0.1289621293524095 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 2511 0.12531884938231433 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGT 2369 0.1182319212213073 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 2268 0.11319121879692906 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 2232 0.1113945327842794 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG 2191 0.10934830704765061 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 2180 0.10879931965489655 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGC 2164 0.10800079253816336 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTG 2088 0.10420778873368074 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 2077 0.10365880134092667 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC 2023 0.10096377232195217 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 4.9907944795824104E-5 0.0 0.0 0.0 6 0.0 4.9907944795824104E-5 0.0 0.0 4.9907944795824104E-5 7 0.0 4.9907944795824104E-5 0.0 0.0 4.9907944795824104E-5 8 0.0 4.9907944795824104E-5 0.0 0.0 4.9907944795824104E-5 9 0.0 4.9907944795824104E-5 0.0 0.0 4.9907944795824104E-5 10 0.0 4.9907944795824104E-5 0.0 0.0 9.981588959164821E-5 11 0.0 4.9907944795824104E-5 0.0 0.0 9.981588959164821E-5 12 0.0 4.9907944795824104E-5 0.0 0.0 3.493556135707687E-4 13 0.0 4.9907944795824104E-5 0.0 0.0 3.9926355836659283E-4 14 0.0 4.9907944795824104E-5 0.0 0.0 3.9926355836659283E-4 15 0.0 4.9907944795824104E-5 0.0 0.0 4.491715031624169E-4 16 0.0 4.9907944795824104E-5 0.0 4.9907944795824104E-5 4.491715031624169E-4 17 0.0 4.9907944795824104E-5 0.0 4.9907944795824104E-5 4.491715031624169E-4 18 0.0 4.9907944795824104E-5 0.0 4.9907944795824104E-5 4.990794479582411E-4 19 0.0 4.9907944795824104E-5 0.0 1.497238343874723E-4 4.990794479582411E-4 20 0.0 9.981588959164821E-5 0.0 2.4953972397912053E-4 4.990794479582411E-4 21 0.0 9.981588959164821E-5 0.0 2.994476687749446E-4 5.988953375498892E-4 22 0.0 9.981588959164821E-5 0.0 4.491715031624169E-4 5.988953375498892E-4 23 0.0 9.981588959164821E-5 0.0 8.983430063248338E-4 5.988953375498892E-4 24 0.0 9.981588959164821E-5 0.0 0.001447330399078899 5.988953375498892E-4 25 0.0 9.981588959164821E-5 0.0 0.0020462257366287884 5.988953375498892E-4 26 0.0 9.981588959164821E-5 0.0 0.0026451210741786774 6.987112271415374E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 620 0.0 19.354446 28 CTAGCGG 635 0.0 18.645756 29 TAGCGGC 660 0.0 17.93948 30 CGCACGA 95 7.7010554E-7 16.841764 28 CACGATT 90 8.586794E-6 16.000074 30 GTATCAA 4215 0.0 15.954286 1 CGCCGGT 815 0.0 15.705595 7 CAAGACG 755 0.0 15.677888 4 CTATTCC 720 0.0 15.551358 4 CGGTCCA 815 0.0 15.509275 10 CGCAAGA 745 0.0 15.4662485 2 GTATTAG 425 0.0 15.446162 1 AAGACGG 770 0.0 15.372475 5 GTCCTAT 745 0.0 15.259059 1 CCTATTC 745 0.0 15.244588 3 CGCTTCG 505 0.0 15.207991 32 GGTCCAA 875 0.0 15.177215 11 GCGCAAG 735 0.0 15.030985 1 AGCGGCG 790 0.0 14.784879 31 GGGTATA 130 8.2480256E-8 14.77963 1 >>END_MODULE