##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062934_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 556943 Sequences flagged as poor quality 0 Sequence length 38 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.04301876493645 32.0 32.0 32.0 32.0 32.0 2 31.29721174339205 32.0 32.0 32.0 32.0 32.0 3 31.388176168835948 32.0 32.0 32.0 32.0 32.0 4 31.494160084604708 32.0 32.0 32.0 32.0 32.0 5 31.40539696162803 32.0 32.0 32.0 32.0 32.0 6 34.9188390912535 36.0 36.0 36.0 36.0 36.0 7 34.956417443077655 36.0 36.0 36.0 36.0 36.0 8 34.9032683775539 36.0 36.0 36.0 36.0 36.0 9 34.989835584610994 36.0 36.0 36.0 36.0 36.0 10 34.864907180806654 36.0 36.0 36.0 32.0 36.0 11 35.03448647348113 36.0 36.0 36.0 36.0 36.0 12 34.93179373831792 36.0 36.0 36.0 36.0 36.0 13 34.970110047168205 36.0 36.0 36.0 36.0 36.0 14 34.919779941573914 36.0 36.0 36.0 32.0 36.0 15 34.88887552227068 36.0 36.0 36.0 32.0 36.0 16 34.88672090321631 36.0 36.0 36.0 32.0 36.0 17 34.86665960430421 36.0 36.0 36.0 32.0 36.0 18 34.85888142951792 36.0 36.0 36.0 32.0 36.0 19 34.82998978351465 36.0 36.0 36.0 32.0 36.0 20 34.82597141897824 36.0 36.0 36.0 32.0 36.0 21 34.810458161786755 36.0 36.0 36.0 32.0 36.0 22 34.7838270702747 36.0 36.0 36.0 32.0 36.0 23 34.71992286463785 36.0 36.0 36.0 32.0 36.0 24 34.70741350551133 36.0 36.0 36.0 32.0 36.0 25 34.68075368574522 36.0 36.0 36.0 32.0 36.0 26 34.615077305936154 36.0 36.0 36.0 32.0 36.0 27 34.59631236948844 36.0 36.0 36.0 32.0 36.0 28 34.543752233172874 36.0 36.0 36.0 32.0 36.0 29 34.515799641974134 36.0 36.0 36.0 32.0 36.0 30 34.47843136550778 36.0 36.0 36.0 32.0 36.0 31 34.45730532567965 36.0 36.0 36.0 32.0 36.0 32 34.41674821301282 36.0 36.0 36.0 32.0 36.0 33 34.356029252544694 36.0 36.0 36.0 32.0 36.0 34 34.327586485511084 36.0 36.0 36.0 32.0 36.0 35 34.25977164629055 36.0 36.0 36.0 32.0 36.0 36 34.20761191001593 36.0 36.0 36.0 32.0 36.0 37 34.16630427171183 36.0 36.0 36.0 32.0 36.0 38 33.76340128163923 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 1.0 21 13.0 22 68.0 23 134.0 24 378.0 25 998.0 26 2044.0 27 4009.0 28 6987.0 29 11181.0 30 16562.0 31 23724.0 32 33300.0 33 51732.0 34 122935.0 35 282876.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.45120840957534 18.52254219422542 12.71294638608412 25.313303010115124 2 14.668107867411925 21.86435595743191 37.72630233255468 25.741233842601485 3 17.927687393503465 26.57686693252272 29.327597258606357 26.167848415367462 4 11.68557644139526 17.016463085091292 36.569810555119645 34.728149918393804 5 13.058607433794842 38.16764013552554 33.445253823102185 15.328498607577437 6 32.128422477704184 36.72207030162871 17.512205019185085 13.637302201482019 7 28.22253105372591 31.936050332352973 21.61569151323846 18.22572710068266 8 27.994361948539314 32.77898479162552 20.272745228305173 18.953908031529995 9 27.792621481952327 14.340454720118368 19.001138416344354 38.86578538158495 10 15.519652960198513 27.508937244473813 32.095615498286165 24.875794297041505 11 35.96443975191861 21.98885285699408 22.64335247452928 19.403354916558033 12 24.168715065743285 24.909370685119914 29.54632374461117 21.37559050452563 13 29.85504748258792 20.38689915089749 25.69212896877766 24.065924397736925 14 23.783044225351606 20.169568519579204 26.43376431699474 29.613622938074453 15 24.907575820146764 27.33062449837775 24.495504925997814 23.26629475547767 16 24.315414683369752 26.46195391628946 25.51230556807429 23.7103258322665 17 22.698193531474494 26.21076124486707 27.0302346918805 24.06081053177794 18 23.824161538972568 24.69660270440602 28.844603487250943 22.634632269370474 19 24.306975758740123 25.947718168645622 27.611802284973507 22.133503787640745 20 24.761600379212954 24.013049809405988 28.21078638208937 23.014563429291687 21 25.856419261645307 24.770128254159776 26.11012656636879 23.263325917826126 22 24.384003389933977 25.133810820855995 26.881386425540853 23.60079936366917 23 22.91764672084346 24.882124170919052 27.295122292806074 24.90510681543141 24 23.180828199654183 26.080047688901736 27.185008160619667 23.55411595082441 25 23.915373745607717 24.788892220568354 27.044778370497518 24.25095566332641 26 23.014563429291687 25.61464997315704 27.87771818660078 23.493068410950492 27 24.319544369890636 25.55252512375593 26.99378571954401 23.134144786809422 28 23.133965235221556 25.141531539134164 27.895852896975093 23.82865032866918 29 22.912398575796804 25.60513373900022 28.19480629076943 23.28766139443354 30 23.53795630791661 25.46651991316885 28.061579012573993 22.93394476634054 31 23.247621390339766 25.420734258263412 27.04352150938247 24.288122842014353 32 22.79389452780626 25.906241751848935 27.15897318037932 24.14089053996549 33 22.8664333693035 25.463108432999427 27.44948764954403 24.22097054815304 34 23.189267124283813 25.817363715856022 27.951693440800945 23.04167571905922 35 24.3768213264194 25.519846734764602 27.306564585603915 22.79676735321209 36 23.14294281461478 26.427300459831613 27.178723855044414 23.25103287050919 37 24.087922821545472 26.20411783611608 26.84691252067088 22.861046821667568 38 23.27275861264079 26.059399256297322 26.977805628224072 23.690036502837813 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 470.0 1 363.0 2 256.0 3 256.0 4 807.0 5 1358.0 6 1358.0 7 1538.5 8 1719.0 9 1560.5 10 1402.0 11 1402.0 12 1785.5 13 2169.0 14 2621.0 15 3073.0 16 3073.0 17 4416.0 18 5759.0 19 5759.0 20 6463.5 21 7168.0 22 6783.0 23 6398.0 24 6398.0 25 6647.0 26 6896.0 27 6896.0 28 9141.5 29 11387.0 30 13746.5 31 16106.0 32 16106.0 33 19161.0 34 22216.0 35 22216.0 36 24001.0 37 25786.0 38 29190.0 39 32594.0 40 32594.0 41 34844.5 42 37095.0 43 40869.0 44 44643.0 45 44643.0 46 50016.0 47 55389.0 48 55389.0 49 54451.5 50 53514.0 51 50411.0 52 47308.0 53 47308.0 54 44132.5 55 40957.0 56 40957.0 57 38792.5 58 36628.0 59 32318.5 60 28009.0 61 28009.0 62 26423.0 63 24837.0 64 20426.0 65 16015.0 66 16015.0 67 13443.0 68 10871.0 69 10871.0 70 8852.5 71 6834.0 72 5376.0 73 3918.0 74 3918.0 75 2988.5 76 2059.0 77 2059.0 78 1942.0 79 1825.0 80 1404.5 81 984.0 82 984.0 83 926.5 84 869.0 85 869.0 86 561.5 87 254.0 88 191.5 89 129.0 90 129.0 91 78.5 92 28.0 93 19.5 94 11.0 95 11.0 96 8.5 97 6.0 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009695785744681234 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 8.977579393223365E-4 8 0.0023341706422380743 9 0.005206996048069551 10 7.182063514578691E-4 11 0.005206996048069551 12 7.182063514578691E-4 13 3.5910317572893454E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 3.5910317572893454E-4 22 0.0 23 1.7955158786446727E-4 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 556943.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.68704421137605 #Duplication Level Percentage of deduplicated Percentage of total 1 82.52118245681602 49.25445465675008 2 11.533855251293351 13.76843456623116 3 2.8350673920061173 5.0765037830669915 4 1.016997532124572 2.428063066511186 5 0.5041435385359044 1.5045418836736046 6 0.299746336728735 1.0734583711515613 7 0.19333165354651724 0.8077576466882588 8 0.14215661826102913 0.6787926687268603 9 0.10355715372861533 0.5562918371703718 >10 0.6708103220670163 7.714891005382076 >50 0.09999869904833938 4.234659511951102 >100 0.07250660687976934 8.32758644332772 >500 0.004833773791984585 1.8086200690004044 >1k 0.0018126651719942196 2.7659444903686143 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 4365 0.7837426810283996 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 3131 0.5621760216036471 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 2242 0.40255465999213563 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 2211 0.39698856076833716 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1908 0.3425844296454036 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1482 0.2660954532151405 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 938 0.16841938941687032 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 854 0.15333705603625505 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 797 0.14310261552798043 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 741 0.13304772660757025 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 693 0.12442925039007582 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 596 0.1070127463672225 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 586 0.10521723048857781 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 579 0.10396036937352654 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 571 0.10252395667061082 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 1.7955158786446727E-4 0.0 16 0.0 0.0 0.0 1.7955158786446727E-4 0.0 17 0.0 0.0 0.0 1.7955158786446727E-4 0.0 18 0.0 0.0 0.0 1.7955158786446727E-4 0.0 19 0.0 0.0 0.0 7.182063514578691E-4 0.0 20 0.0 0.0 0.0 8.977579393223364E-4 0.0 21 0.0 0.0 0.0 0.0014364127029157382 0.0 22 0.0 0.0 0.0 0.002693273817967009 0.0 23 0.0 0.0 0.0 0.004309238108747214 0.0 24 0.0 0.0 0.0 0.008798027805358898 0.0 25 0.0 0.0 0.0 0.0098753373325457 0.0 26 0.0 0.0 0.0 0.012748162738377177 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGGC 130 0.0 22.151981 30 GTCCTAA 80 5.2332325E-9 22.002098 1 CACCTAG 45 3.535618E-4 21.33154 14 TCTAGCG 135 0.0 21.331537 28 CTAGCGG 140 0.0 20.569698 29 ATAGGCC 40 0.004478155 20.001907 3 TAAGCCC 40 0.004478155 20.001907 4 GTTAGAC 60 1.13601265E-4 18.668447 3 GCAGGAC 60 1.13601265E-4 18.668447 3 AGCGGCG 155 0.0 18.57908 31 CTAAGAC 70 1.7831024E-5 18.28746 3 GGTTATA 70 1.7831024E-5 18.28746 1 GTATTAG 80 2.7883925E-6 18.001717 1 GTAGGAC 160 0.0 18.001717 3 ATCTATA 55 0.0013625768 17.456211 1 ATTGAGG 55 0.0013625768 17.456211 3 TAGGACG 130 2.582965E-10 17.232412 4 CGGTCCA 175 0.0 16.458712 10 TAGCGTA 120 3.0893716E-8 16.0044 7 AGAACCG 60 0.0024353096 16.0044 5 >>END_MODULE