##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062931_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2166223 Sequences flagged as poor quality 0 Sequence length 38 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26276103614448 32.0 32.0 32.0 32.0 32.0 2 31.322499114818743 32.0 32.0 32.0 32.0 32.0 3 31.395341569173628 32.0 32.0 32.0 32.0 32.0 4 31.48082353478843 32.0 32.0 32.0 32.0 32.0 5 31.42035515272435 32.0 32.0 32.0 32.0 32.0 6 34.94787055626313 36.0 36.0 36.0 36.0 36.0 7 34.98389500988587 36.0 36.0 36.0 36.0 36.0 8 34.91712072118152 36.0 36.0 36.0 36.0 36.0 9 35.01439463988703 36.0 36.0 36.0 36.0 36.0 10 34.88606020709779 36.0 36.0 36.0 32.0 36.0 11 35.040264091000786 36.0 36.0 36.0 36.0 36.0 12 34.965430613561026 36.0 36.0 36.0 36.0 36.0 13 34.9971295660696 36.0 36.0 36.0 36.0 36.0 14 34.9525293563959 36.0 36.0 36.0 32.0 36.0 15 34.926433705117155 36.0 36.0 36.0 36.0 36.0 16 34.949908204279986 36.0 36.0 36.0 36.0 36.0 17 34.92300284873718 36.0 36.0 36.0 32.0 36.0 18 34.91710179422894 36.0 36.0 36.0 32.0 36.0 19 34.91443817187796 36.0 36.0 36.0 32.0 36.0 20 34.907788810293304 36.0 36.0 36.0 32.0 36.0 21 34.89783461813488 36.0 36.0 36.0 32.0 36.0 22 34.87523445185468 36.0 36.0 36.0 32.0 36.0 23 34.8311249580491 36.0 36.0 36.0 32.0 36.0 24 34.81688034888375 36.0 36.0 36.0 32.0 36.0 25 34.80912768445354 36.0 36.0 36.0 32.0 36.0 26 34.74362288647106 36.0 36.0 36.0 32.0 36.0 27 34.72277969534993 36.0 36.0 36.0 32.0 36.0 28 34.6997335916016 36.0 36.0 36.0 32.0 36.0 29 34.67701755544097 36.0 36.0 36.0 32.0 36.0 30 34.65852638440271 36.0 36.0 36.0 32.0 36.0 31 34.6475108980008 36.0 36.0 36.0 32.0 36.0 32 34.63364898258397 36.0 36.0 36.0 32.0 36.0 33 34.609117343874566 36.0 36.0 36.0 32.0 36.0 34 34.60291622792298 36.0 36.0 36.0 32.0 36.0 35 34.59073834965283 36.0 36.0 36.0 32.0 36.0 36 34.554224565060935 36.0 36.0 36.0 32.0 36.0 37 34.555620543222005 36.0 36.0 36.0 32.0 36.0 38 34.16936852761696 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 14.0 21 45.0 22 143.0 23 414.0 24 1287.0 25 3356.0 26 7074.0 27 13468.0 28 23574.0 29 37322.0 30 56615.0 31 81512.0 32 116800.0 33 185737.0 34 465221.0 35 1173638.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.662910496409104 17.846102280848516 12.114987931871863 27.37599929087051 2 15.529617924663308 20.390107754422214 37.144438566314996 26.93583575459948 3 18.289714401518218 23.93437794723812 28.739238757967208 29.036668893276453 4 12.765739398583708 16.54642649407724 35.45346271385178 35.23437139348727 5 14.371980341811689 36.6527068786117 33.7508344020142 15.224478377562411 6 34.31018086805588 35.401251950402084 16.77336558613622 13.51520159540582 7 30.171132755643143 30.283310090005 20.785398296474078 18.76015885787778 8 27.735752720933927 33.953460673410376 19.17561334116283 19.135173264492874 9 27.520759248119813 14.441105688774933 17.875597317443955 40.1625377456613 10 15.494769846952414 27.39820948218276 32.82723714320403 24.27978352766079 11 36.70809463507732 21.13652763113612 22.70271443140148 19.45266330238508 12 24.59589652919955 23.415081143838446 29.345286594359287 22.643735732602718 13 30.02044578174763 19.923904207196234 24.646884407240826 25.408765603815315 14 23.35388524352536 19.24465728812652 25.495817141548745 31.90564032679938 15 25.013398897528095 27.296127868645105 22.074366304854117 25.616106928972687 16 25.23733706086585 25.905458486960946 24.01465592415924 24.842548528013968 17 24.169210649134463 25.89848782881541 25.18097167281485 24.751329849235283 18 24.39324113907017 25.783495051063532 25.82093348653394 24.002330323332362 19 25.56477334051019 25.18351065425859 25.26618912272652 23.98552688250471 20 25.92161564160292 24.93898365957706 24.97425241999554 24.165148278824482 21 25.98671788948686 24.67784926937313 24.661738270592764 24.673694570547248 22 25.818141362307905 24.75786173248251 24.939283664963085 24.484713240246496 23 25.25576834833798 24.884337587445028 24.912497264818224 24.947396799398767 24 24.880033126783346 25.093861527645124 25.146533851777956 24.879571493793577 25 25.073976720760843 24.6378256706838 25.287251260489462 25.000946348065895 26 24.793800084294183 25.18161795900053 25.322369857581606 24.70221209912368 27 25.105460105196975 25.270586301865645 24.879444489068987 24.744509103868396 28 25.157012920645748 24.921810912357593 25.106556434863812 24.814619732132844 29 24.942999866588067 25.15719757384166 24.94701607359907 24.952786485971203 30 24.876478552762112 25.173585544978515 24.997149416288167 24.952786485971203 31 25.18798849425936 24.815312181617497 24.91396315153149 25.082736172591645 32 24.886865295031953 25.198005930137384 24.93838353669036 24.976745238140303 33 24.81891291893771 25.170538767246033 25.09178417919116 24.918764134625103 34 24.988793859173317 25.005320320207108 25.2340133033395 24.771872517280077 35 25.088968217953557 25.096400509088863 25.22376505096659 24.590866221990996 36 24.82943815110448 25.089660667438206 25.21776382209957 24.86313735935774 37 25.043728184956027 24.84988849255132 25.1408096027048 24.96557371978785 38 24.812692327933146 25.19367821026654 24.97606431843089 25.017565143369424 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 37.0 2 63.0 3 63.0 4 228.0 5 393.0 6 393.0 7 493.0 8 593.0 9 561.5 10 530.0 11 530.0 12 832.5 13 1135.0 14 1838.5 15 2542.0 16 2542.0 17 4176.5 18 5811.0 19 5811.0 20 8166.0 21 10521.0 22 12284.5 23 14048.0 24 14048.0 25 17368.5 26 20689.0 27 20689.0 28 26383.0 29 32077.0 30 41097.5 31 50118.0 32 50118.0 33 62046.5 34 73975.0 35 73975.0 36 84522.0 37 95069.0 38 107306.0 39 119543.0 40 119543.0 41 131788.5 42 144034.0 43 157005.5 44 169977.0 45 169977.0 46 181772.0 47 193567.0 48 193567.0 49 201300.0 50 209033.0 51 210863.5 52 212694.0 53 212694.0 54 207818.5 55 202943.0 56 202943.0 57 192079.0 58 181215.0 59 163734.0 60 146253.0 61 146253.0 62 127537.0 63 108821.0 64 89689.5 65 70558.0 66 70558.0 67 57015.5 68 43473.0 69 43473.0 70 34263.5 71 25054.0 72 19532.0 73 14010.0 74 14010.0 75 10943.5 76 7877.0 77 7877.0 78 6338.5 79 4800.0 80 3686.5 81 2573.0 82 2573.0 83 1949.5 84 1326.0 85 1326.0 86 929.5 87 533.0 88 397.0 89 261.0 90 261.0 91 158.5 92 56.0 93 44.0 94 32.0 95 32.0 96 21.0 97 10.0 98 10.0 99 7.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008632536908711614 2 4.616329897706746E-5 3 0.0 4 1.3848989693120237E-4 5 4.616329897706746E-5 6 1.3848989693120237E-4 7 4.616329897706746E-4 8 0.0025389814437387103 9 0.003693063918165397 10 0.0015695521652202935 11 0.006185882062927039 12 3.693063918165397E-4 13 2.7697979386240475E-4 14 4.616329897706746E-5 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 4.616329897706746E-5 22 9.232659795413492E-5 23 2.308164948853373E-4 24 0.0 25 4.616329897706746E-5 26 0.0 27 4.616329897706746E-5 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 4.616329897706746E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 2166223.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.29077500723396 #Duplication Level Percentage of deduplicated Percentage of total 1 56.668016192223746 21.698622581227305 2 17.191304487535742 13.165367444261653 3 8.604587355256974 9.884289553507054 4 5.062770483148895 7.754296219340779 5 3.1725122887368817 6.07389771278544 6 2.198488566979459 5.0509098644512 7 1.4954311359826131 4.008285201670577 8 1.0842400886258925 3.3213114629917966 9 0.8327931076011856 2.8699464159658965 >10 3.5687155849678014 21.775967375469893 >50 0.09544033919366794 2.452859302440099 >100 0.025094716552271034 1.5751400205819226 >500 2.4226127792815476E-4 0.06038918228058783 >1k 3.633919168922034E-4 0.30871766302578124 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3387 0.15635509363532749 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.616329897706746E-5 2 0.0 0.0 0.0 0.0 4.616329897706746E-5 3 0.0 0.0 0.0 0.0 4.616329897706746E-5 4 0.0 0.0 0.0 0.0 4.616329897706746E-5 5 0.0 0.0 0.0 0.0 4.616329897706746E-5 6 0.0 0.0 0.0 0.0 2.3081649488533728E-4 7 0.0 0.0 0.0 0.0 2.3081649488533728E-4 8 0.0 0.0 0.0 0.0 2.3081649488533728E-4 9 0.0 0.0 0.0 0.0 2.3081649488533728E-4 10 0.0 0.0 0.0 4.616329897706746E-5 2.7697979386240475E-4 11 0.0 0.0 0.0 4.616329897706746E-5 2.7697979386240475E-4 12 0.0 0.0 0.0 4.616329897706746E-5 6.924494846560119E-4 13 0.0 0.0 0.0 4.616329897706746E-5 7.847760826101467E-4 14 0.0 0.0 0.0 9.232659795413492E-5 7.847760826101467E-4 15 0.0 0.0 0.0 1.3848989693120237E-4 0.001015592577495484 16 0.0 0.0 0.0 3.231430928394722E-4 0.001200245773403754 17 0.0 0.0 0.0 3.231430928394722E-4 0.001200245773403754 18 0.0 0.0 0.0 3.693063918165397E-4 0.0012464090723808214 19 0.0 0.0 0.0 3.693063918165397E-4 0.0012464090723808214 20 0.0 0.0 0.0 4.6163298977067456E-4 0.0013848989693120237 21 0.0 0.0 0.0 4.6163298977067456E-4 0.0013848989693120237 22 0.0 0.0 0.0 6.00122886701877E-4 0.0013848989693120237 23 0.0 0.0 0.0 7.386127836330794E-4 0.0013848989693120237 24 0.0 0.0 0.0 0.0012464090723808214 0.0013848989693120237 25 0.0 0.0 0.0 0.0012925723713578887 0.0013848989693120237 26 0.0 0.0 0.0 0.0019388585570368332 0.001523388866243226 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 30 8.418392E-4 26.667149 3 TCGCGTA 60 4.7211215E-6 21.334703 9 GGTATCA 760 0.0 21.264524 1 GTATCAA 2305 0.0 20.756214 1 CGCGTAA 65 9.436782E-6 19.69312 10 GTATAGG 295 0.0 16.814638 1 ATACCGT 115 1.841363E-8 16.69711 6 ATAGGAC 250 0.0 16.00029 3 GCGTAAC 80 5.6236753E-5 16.000288 11 CGATCGT 85 9.440585E-5 15.058399 25 TATAGGA 270 0.0 14.81474 2 GTAGCGA 65 0.004160744 14.77052 6 TATCAAC 3215 0.0 14.631342 2 TCAACGC 3220 0.0 14.460222 4 ATCAACG 3280 0.0 14.24416 3 GTCGCGT 90 1.5340366E-4 14.223464 8 CAACGCA 3290 0.0 14.104574 5 AATAGCG 80 0.0010177849 14.001222 5 CGACTGA 70 0.0068044956 13.71485 10 TACCGTC 130 1.336568E-6 13.539643 7 >>END_MODULE